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clinicaltrials
Commit 4dabe1ef authored by Romain Loth's avatar Romain Loth
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LOCALDB/DirScan_main.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
header('Content-Type: application/json');
include("DirectoryScanner.php");
$projectFolderPat = dirname(dirname(getcwd())) . "/";
$instance = new scanTree($projectFolderPat);
$instance->getDirectoryTree("data");
//pr(var_dump($instance->folders));
$output = array();
$output["folders"] = $instance->folders;
$output["gexf_idfolder"] = $instance->gexf_folder;
echo json_encode($output);
// ** Debug Functions: **
function br() {
echo "----------<br>";
}
function pr($msg) {
echo $msg . "<br>";
}
?>
LOCALDB/DirectoryScanner.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
class scanTree {
public $root;
public $folders = array();
public $gexf_folder = array();
public function __construct($rootpath = "") {
$this->root = $rootpath;
}
public function getDirectoryTree($dir) {
$folder = array();
$dbs = array();
$gexfs = array();
$dataFolder = $this->root . $dir;
$files = scandir($dataFolder);
foreach ($files as $f) {
if ($f != "." and $f != ".." and $f[strlen($f) - 1] != "~") {
if (is_dir($dataFolder . "/" . $f)) {
//pr("Dir: ".$f);
$subfolder = $f;
$this->getDirectoryTree($dir . "/" . $subfolder);
} else {
//pr("File: ".$f);
if ((strpos($f, '.gexf')))
array_push($gexfs, $f);
if ((strpos($f, '.db')) or (strpos($f, '.sqlite')) or (strpos($f, '.sqlite3')))
array_push($dbs, $f);
if (!$folder[$dir]["gexf"] or !$folder[$dir]["dbs"])
$folder[$dir] = array();
$folder[$dir]["gexf"] = $gexfs;
$folder[$dir]["dbs"] = $dbs;
if ((strpos($f, '.gexf'))) {
$this->gexf_folder[$dir . "/" . $f] = "";
}
}
}
}
if ($folder[$dir]["gexf"]) {
foreach ($folder[$dir]["gexf"] as $g) {
$this->gexf_folder[$dir . "/" . $g] = count($this->folders);
}
}
array_push($this->folders, $folder);
}
}
?>
LOCALDB/clear_favorites.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
echo 'toto';
?>
\ No newline at end of file
LOCALDB/default_div.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
// default informations
$thedb = $graphdb;
$gexf=$_GET["gexf"];
$max_item_displayed=6;
$type = $_GET["type"];
$TITLE="ISITITLE";
$query = str_replace( '__and__', '&', $_GET["query"] );
$elems = json_decode($query);
$table = "";
$column = "";
$id="";
$twjs=end( explode("/",getcwd()) )."/"; // LOCALDB folder.
if($type=="social"){
$table = "ISIAUTHOR";
$column = "data";
$id = "id";
$restriction='';
$factor=10;// factor for normalisation of stars
}
if($type=="semantic"){
$table = $_GET["index"];//"ISItermsfirstindexing";
$column = "data";
$id = "id";
$restriction='';
$factor=10;
}
$restriction='';
$factor=10;
$sql="";
//////////
if (count($elems)==1){// un seul mot est sélectionné, on compte les mots multiples
$sql = 'SELECT count(*),'.$id.'
FROM '.$table.' where (';
foreach($elems as $elem){
$sql.=' '.$column.'="'.$elem.'" OR ';
}
#$querynotparsed=$sql;#####
$sql = substr($sql, 0, -3);
$sql = str_replace( ' & ', '" OR '.$column.'="', $sql );
$sql.=' COLLATE NOCASE ) '.$restriction.'
GROUP BY '.$id.'
ORDER BY count('.$id.') DESC
LIMIT 1000';
}else{// on compte une seule fois un mot dans un article
$factor=ceil(count($elems)/5); //les scores sont moins haut
$sql='';
foreach($elems as $elem){
$sql.=' '.$column.'="'.$elem.'" OR ';
}
$sql=substr($sql, 0, -3);
$sql='SELECT count(*),id,data FROM (SELECT *
FROM '.$table.' where ('.$sql.' COLLATE NOCASE )'.$restriction.'
group by id,data) GROUP BY '.$id.'
ORDER BY count('.$id.') DESC
LIMIT 1000';
}
$wos_ids = array();
$sum=0;
// echo "<br>";
// echo "$sql";
//The final query!
// array of all relevant documents with score
foreach ($base->query($sql) as $row) {
// on pondère le score par le nombre de termes mentionnés par l'article
//$num_rows = $result->numRows();
$wos_ids[$row[$id]] = $row["count(*)"];
$sum = $row["count(*)"] +$sum;
}
// /// nombre de document associés $related
$total_count=0;
$count_max=500;
$number_doc=count($wos_ids);
$count=0;
$all_terms_from_selected_projects=array();// list of terms for the top 6 project selected
// to filter under some conditions
$to_display=true;
$count=0;
foreach ($wos_ids as $id => $score) {
if ($total_count<$count_max) {
// retrieve publication year
if ($to_display){
$total_count+=1;
if ($count<=$max_item_displayed){
$count+=1;
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id.' group by data';
foreach ($base->query($sql) as $row) {
$external_link="<a href=http://google.com/webhp?#q=".urlencode('"'.$row['data'].'"')." target=blank>".' <img width=15px src="libs/img2/google.png"></a>';
$output.="<li title='".$score."'>";
$output.=$external_link.imagestar($score,$factor,$twjs).' ';
$output.='<a href="JavaScript:newPopup(\''.$twjs.'default_doc_details.php?gexf='.urlencode($gexf).'&index='.$table.'&query='.urlencode($query).'&type='.urlencode($_GET["type"]).'&id='.$id.' \')">'.$row['data']." </a> ";
// echo '<a href="JavaScript:newPopup(\''.$twjs.'default_doc_details.php?gexf='.urlencode($gexf).'&index='.$table.'&query='.urlencode($query).'&type='.urlencode($_GET["type"]).'&id='.$id.' \')">'.$row['data']." </a> ";
}
// get the authors
$sql = 'SELECT data FROM ISIAUTHOR WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.=($row['data']).', ';
}
$output = rtrim($output, ", ");
$output.="</li><br>";
}
}
} else{
continue;
}
}
if ($total_count<$count_max){
$related .= $total_count;
}else{
$related .= ">".$count_max;
}
$output .= "</ul>"; #####
// // if (($project_folder=='nci')&&(count($elems)<$max_selection_size)){
// // // for NCI we compare the impact and novelty score making the difference if there are more than 4 terms selected
// // $news='';//new terms
// // $terms_from_selected_projects=array_unique($all_terms_from_selected_projects);
// // if(count($terms_from_selected_projects)>3){
// // $diff=array();
// // foreach ($terms_from_selected_projects as $key => $term) {
// // $sql= "select count(*),ISIterms.id, ISIterms.data from ISIterms join ISIpubdate on (ISIterms.id=ISIpubdate.id AND ISIpubdate.data=2011 AND ISIterms.data='".$term."') group by ISIterms.data";
// // $nov=0;
// // foreach ($corporadb->query($sql) as $row) {
// // $nov=$row['count(*)'];
// // }
// // $sql= "select count(*),ISIterms.id, ISIterms.data from ISIterms join ISIpubdate on (ISIterms.id=ISIpubdate.id AND ISIpubdate.data=2012 AND ISIterms.data='".$term."') group by ISIterms.data";
// // $imp=0;
// // foreach ($corporadb->query($sql) as $row) {
// // $imp=$row['count(*)'];
// // }
// // $diff[$term]=info($nov,$imp); //positive si c'est un term novelty, negatif si c'est un terme impact.
// // //echo $term.'-nov: '.$nov.'- imp:'.$imp.'<br/>';//'-info'.$diff[$term].
// // }
// // if (true){
// // arsort($diff);
// // $res=array_keys($diff);
// // //echo implode(', ', $res);
// // $nov_string='';
// // for ($i=0;$i<$top_displayed;$i++){
// // // on récupère les titres du document qui a le plus for impact
// // $sql="SELECT ISIterms.id,ISIC1_1.data,count(*) from ISIterms,ISIpubdate,ISIC1_1 where ISIterms.data='".$res[$i]."' AND ISIterms.id=ISIpubdate.id AND ISIterms.id=ISIC1_1.id AND ISIpubdate.data='2011' group by ISIterms.id ORDER BY RANDOM() limit 1";
// // //on récupère les id associés.
// // foreach ($corporadb->query($sql) as $row){
// // $sql2='SELECT ISIpubdate.id,ISIC1_1.data from ISIpubdate,ISIC1_1 where ISIC1_1.data="'.$row['data'].'" AND ISIpubdate.id=ISIC1_1.id AND ISIpubdate.data="2013" limit 1';
// // //echo $sql2;
// // foreach ($corporadb->query($sql2) as $row2){
// // $nov_string.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?db='.urlencode($graphdb).'&gexf='.urlencode($gexf).'&query='.urlencode('["'.$res[$i].'"]').'&type='.urlencode($_GET["type"]).'&id='.$row2['id'].' \')">'.$res[$i]."</a>, ";
// // }
// // }
// // }
// // $news.='<br/><b><font color="#FF0066">Top '.$top_displayed.' Novelty related terms </font></b>'.$nov_string.'<br/>';
// // asort($diff);
// // $res=array_keys($diff);
// // $res_string='';
// // for ($i=0;$i<$top_displayed;$i++){
// // // on récupère les titres du document qui a le plus for impact
// // $sql="SELECT ISIterms.id,ISIC1_1.data,count(*) from ISIterms,ISIpubdate,ISIC1_1 where ISIterms.data='".$res[$i]."' AND ISIterms.id=ISIpubdate.id AND ISIterms.id=ISIC1_1.id AND ISIpubdate.data='2012' group by ISIterms.id ORDER BY RANDOM()limit 1";
// // //on récupère les id associés.
// // foreach ($corporadb->query($sql) as $row){
// // $sql2='SELECT ISIpubdate.id,ISIC1_1.data from ISIpubdate,ISIC1_1 where ISIC1_1.data="'.$row['data'].'" AND ISIpubdate.id=ISIC1_1.id AND ISIpubdate.data="2013" limit 1';
// // //echo $sql2;
// // foreach ($corporadb->query($sql2) as $row2){
// // $res_string.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?db='.urlencode($graphdb).'&gexf='.urlencode($gexf).'&query='.urlencode('["'.$res[$i].'"]').'&type='.urlencode($_GET["type"]).'&id='.$row2['id'].' \')">'.$res[$i]."</a>, ";
// // }
// // }
// // }
// // $news.='<br/><b><font color="#CF5300">Top '.$top_displayed.' Impact related terms: </font></b>'.$res_string.'<br/>';
// // }
// // }
// // }
// // display the most occuring terms when only one is selected.
// //elseif (count($elems)==1) {// on affiche les voisins
// // $terms_array=array();
// // $id_sql='SELECT ISIterms.id FROM ISIterms where ISIterms.data="'.$elems[0].'" group by id';
// // foreach ($base->query($id_sql) as $row_id) {
// // $sql2='SELECT ISIterms.data FROM ISIterms where ISIterms.id='.$row_id['id'];
// // foreach ($base->query($sql2) as $row_terms) {
// // if ($terms_array[$row_terms['data']]>0){
// // $terms_array[$row_terms['data']]=$terms_array[$row_terms['data']]+1;
// // }else{
// // $terms_array[$row_terms['data']]=1;
// // }
// // }
// // }
// // natsort($terms_array);
// // $terms_list=array_keys(array_slice($terms_array,-11,-1));
// // foreach ($terms_list as $first_term) {
// // $related_terms.=$first_term.', ';
// // }
// // $news.='<br/><b><font color="#CF5300">Related terms: </font></b>'.$related_terms.'<br/>';
// //}
// calculate binomial coefficient
function binomial_coeff($n, $k) {
$j = $res = 1;
if($k < 0 || $k > $n)
return 0;
if(($n - $k) < $k)
$k = $n - $k;
while($j <= $k) {
$res *= $n--;
$res /= $j++;
}
return $res;
}
function imagestar($score,$factor,$twjs) {
// produit le html des images de score
$star_image = '';
if ($score > .5) {
$star_image = '';
for ($s = 0; $s < min(5,$score/$factor); $s++) {
$star_image.='<img src="libs/img2/star.gif" border="0" >';
}
} else {
$star_image.='<img src="libs/img2/stargrey.gif" border="0">';
}
return $star_image;
}
if($max_item_displayed>$related) $max_item_displayed=$related;
echo $news.'<br/><h4><font color="#0000FF"> Full text of top '.$max_item_displayed.'/'.$related.' related publications:</font></h4>'.$output;
//pt - 301 ; 15.30
?>
LOCALDB/default_doc_details.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
include('parameters_details.php');
$db = $gexf_db[$gexf];
$base = new PDO("sqlite:../" .$db);
$query = str_replace( '__and__', '&', $_GET["query"] );
$terms_of_query = json_decode($query);
// echo "mainpath: ".$mainpath."<br>";
// echo "thedb: ".$db."<br>";
// echo "thequery: ".var_dump($terms_of_query);
echo '
<html>
<head>
<meta charset="utf-8" />
<title>Document details</title>
<link rel="stylesheet" href="js/jquery-ui.css" />
<script src="js/jquery-1.9.1.js"></script>
<script src="js/jquery-ui.js"></script>
<script>
$(function() {
$( "#tabs" ).tabs({
collapsible: true
});
});
</script>
</head>
<body>
<div id="tabs">
<ul>
<li><a href="#tabs-1">Selected Document</a></li>
<li><a href="full_doc_list.php?'.'gexf='.urlencode($gexf).'&query='.urlencode($_GET["query"]).'&index='.$_GET["index"].'&type='.urlencode($_GET["type"]).'">Full list</a></li>';
echo '</ul>';
echo '<div id="tabs-1">';
$id=$_GET["id"];
// //$elems = json_decode($query);
// $sql = 'SELECT data FROM ISIkeyword WHERE id='.$id;
// foreach ($base->query($sql) as $row) {
// $country=$CC[strtoupper($row['data'])];
// }
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id.' group by data';
foreach ($base->query($sql) as $row) {
$output.='<h2>'.$row['data'].'</h2>';
$find.="<br/><a href=http://google.com/webhp?q=".urlencode('"'.$row['data'].'"')." target='blank'>[ Search on the web ] </a>";
}
// get the authors
$sql = 'SELECT data FROM ISIAUTHOR WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.='<i>'.($row['data']).'</i>, ';
}
$output = rtrim($output, ", ");
// // // get the company
// // $sql = 'SELECT data FROM ISIC1_1 WHERE id='.$id;
// // foreach ($base->query($sql) as $row) {
// //$output.=' - '.substr($row['data'],3,strlen( $row['data'])).' ';
// //}
// get the date
$sql = 'SELECT data FROM ISIpubdate WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.=' ('.$row['data'].') ';
}
// // get the country
// $sql = 'SELECT data FROM ISIkeyword WHERE id='.$id;
// foreach ($base->query($sql) as $row) {
// $country=$CC[strtoupper($row['data'])];
// $output.=strtoupper($country).'<br/> ';
// }
// // get the date
if(strpos($_GET["index"],'terms') ) $sql = 'SELECT data FROM '.$_GET["index"].' WHERE id='.$id;
else $sql = 'SELECT data FROM ISItermsListV1 WHERE id='.$id;
$output.='<br/><b>Keywords: </b>';
$terms=array();
foreach ($base->query($sql) as $row) {
$terms[]=$row['data'];
}
natsort($terms);
$terms=array_unique($terms); // liste des termes de l'article
$keywords='';
foreach ($terms as $key => $value) {
$keywords.=$value.', ';
}
foreach ($terms_of_query as $key => $value) {
$keywords=str_replace($value,'<font color="green"><b> '.$value.'</b></font>',$keywords);
}
foreach (array_diff($terms,$terms_of_query) as $key => $value) {
$keywords=str_ireplace($value,'<font color="#800000"> '.$value.'</font>',$keywords);
}
$output.='<p align="justify">'.$keywords.'</p>';
// // get the website
$sql = 'SELECT data FROM ISISO WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.='<b>Journal: </b>'.$row['data'].'<br/> ';
}
$sql = 'SELECT data FROM ISIABSTRACT WHERE id='.$id;
// echo $output."<br>";
$abs="";
foreach ($base->query($sql) as $row) {
$abs.=". ".$row['data'];
}
$abs=str_replace('ISSUES:' ,'<br/><br/><b>Issues:</b>',$abs);
$abs=str_replace('INTENDED IMPACT:' ,'<br/><br/><b>Intended impact:</b>',$abs);
$abs=str_replace('IMPACT:' ,'<br/><br/><b>Impact:</b>',$abs);
$abs=str_replace('NOVELTY:' ,'<br/><br/><b>Novelty:</b>',$abs);
$abs=str_replace('BOLD INNOVATION:' ,'<br/><br/><b>Bold innovation:</b>',$abs);
$abs=str_replace('SOCIAL PROBLEM:' ,'<br/><br/><b>Social problem:</b>',$abs);
// solving encoding pb
$abs=str_replace('―', ' ', $abs);
$abs=str_replace('‟‟', ' ', $abs);
$abs=str_replace('„‟', ' ', $abs);
$abs=str_replace('_x000D_', ' ', $abs);
$abs=str_replace('•', ' ', $abs);
$abs=str_replace('’', '\'', $abs);
foreach ($terms_of_query as $key => $value) {
$abs=str_ireplace($value,'<font color="green"><b> '.$value.'</b></font>',$abs);
}
foreach (array_diff($terms,$terms_of_query) as $key => $value) {
$abs=str_ireplace($value,'<font color="#800000"> '.$value.'</font>',$abs);
}
$output.='<br/><p align="justify"><b>Abstract : </b><i>'.$abs.' </i></p>';
$output.="<br>";
echo $output.$find;
echo '</div>';
//echo '<div id="tabs-2">
// <p><strong>Click this tab again to close the content pane.</strong></p>
// <p>Morbi tincidunt, dui sit amet facilisis feugiat, odio metus gravida ante, ut pharetra massa metus id nunc. Duis scelerisque molestie turpis. Sed fringilla, massa eget luctus malesuada, metus eros molestie lectus, ut tempus eros massa ut dolor. Aenean aliquet fringilla sem. Suspendisse sed ligula in ligula suscipit aliquam. Praesent in eros vestibulum mi adipiscing adipiscing. Morbi facilisis. Curabitur ornare consequat nunc. Aenean vel metus. Ut posuere viverra nulla. Aliquam erat volutpat. Pellentesque convallis. Maecenas feugiat, tellus pellentesque pretium posuere, felis lorem euismod felis, eu ornare leo nisi vel felis. Mauris consectetur tortor et purus.</p>
// </div>';
echo '</div>';
function pt($string){
// juste pour afficher avec retour à la ligne
echo $string."<br/>";
}
function pta($array){
print_r($array);
echo '<br/>';
}
?>
LOCALDB/default_doc_details2.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
include('parameters_details.php');
$db = $gexf_db[$gexf];
$base = new PDO("sqlite:../" ."data/terrorism/data.db");
$query = str_replace( '__and__', '&', $_GET["query"] );
$terms_of_query = json_decode($query);
// echo "mainpath: ".$mainpath."<br>";
// echo "thedb: ".$db."<br>";
// echo "thequery: ".var_dump($terms_of_query);
echo '
<html>
<head>
<meta charset="utf-8" />
<title>Document details</title>
<link rel="stylesheet" href="js/jquery-ui.css" />
<script src="js/jquery-1.9.1.js"></script>
<script src="js/jquery-ui.js"></script>
<script>
$(function() {
$( "#tabs" ).tabs({
collapsible: true
});
});
</script>
</head>
<body>
<div id="tabs">
<ul>
<li><a href="#tabs-1">Selected Document</a></li>
<li><a href="full_doc_list2.php?'.'gexf='.urlencode($gexf).'&query='.urlencode($_GET["query"]).'&type='.urlencode($_GET["type"]).'">Full list</a></li>';
echo '</ul>';
echo '<div id="tabs-1">';
$id=$_GET["id"];
// //$elems = json_decode($query);
// $sql = 'SELECT data FROM ISIkeyword WHERE id='.$id;
// foreach ($base->query($sql) as $row) {
// $country=$CC[strtoupper($row['data'])];
// }
$sql = 'SELECT data FROM ID WHERE id='.$id.' group by data';
foreach ($base->query($sql) as $row) {
$output.='<h2>Project Identification: '.$row['data'].'</h2>';
}
$sql = 'SELECT data FROM TI WHERE id='.$id.' group by data';
foreach ($base->query($sql) as $row) {
$output.='<h2>'.$row['data'].'</h2>';
$find.="<br/><a href=http://google.com/webhp?q=".urlencode('"'.$row['data'].'"')." target='blank'>[ Search on the web ] </a>";
}
// get the authors
$sql = 'SELECT data FROM PI WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.='<i>'.($row['data']).'</i>, ';
}
$output = rtrim($output, ", ");
// // // get the company
// // $sql = 'SELECT data FROM ISIC1_1 WHERE id='.$id;
// // foreach ($base->query($sql) as $row) {
// //$output.=' - '.substr($row['data'],3,strlen( $row['data'])).' ';
// //}
$output.=' (2014) ';
// // get the country
// $sql = 'SELECT data FROM ISIkeyword WHERE id='.$id;
// foreach ($base->query($sql) as $row) {
// $country=$CC[strtoupper($row['data'])];
// $output.=strtoupper($country).'<br/> ';
// }
// // get the date
// $sql = 'SELECT data FROM '."ISItermsBigWL".' WHERE id='.$id;
$sql = 'SELECT data FROM ISItermsfirstindexing WHERE id='.$id;
$output.='<br/><b>Keywords: </b>';
$terms=array();
foreach ($base->query($sql) as $row) {
$terms[]=$row['data'];
}
natsort($terms);
$terms=array_unique($terms); // liste des termes de l'article
$keywords='';
foreach ($terms as $key => $value) {
$keywords.=$value.', ';
}
foreach ($terms_of_query as $key => $value) {
$keywords=str_replace($value,'<font color="green"><b> '.$value.'</b></font>',$keywords);
}
foreach (array_diff($terms,$terms_of_query) as $key => $value) {
$keywords=str_ireplace($value,'<font color="#800000"> '.$value.'</font>',$keywords);
}
$output.='<p align="justify">'.$keywords.'</p>';
// // get the website
$sql = 'SELECT data FROM AG1 WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.='<b>Agency: </b>'.$row['data'].'<br/> ';
}
$sql = 'SELECT data FROM ABS WHERE id='.$id;
// echo $output."<br>";
$abs="";
foreach ($base->query($sql) as $row) {
$abs.=". ".$row['data'];
}
$abs=str_replace('ISSUES:' ,'<br/><br/><b>Issues:</b>',$abs);
$abs=str_replace('INTENDED IMPACT:' ,'<br/><br/><b>Intended impact:</b>',$abs);
$abs=str_replace('IMPACT:' ,'<br/><br/><b>Impact:</b>',$abs);
$abs=str_replace('NOVELTY:' ,'<br/><br/><b>Novelty:</b>',$abs);
$abs=str_replace('BOLD INNOVATION:' ,'<br/><br/><b>Bold innovation:</b>',$abs);
$abs=str_replace('SOCIAL PROBLEM:' ,'<br/><br/><b>Social problem:</b>',$abs);
// solving encoding pb
$abs=str_replace('―', ' ', $abs);
$abs=str_replace('‟‟', ' ', $abs);
$abs=str_replace('„‟', ' ', $abs);
$abs=str_replace('_x000D_', ' ', $abs);
$abs=str_replace('•', ' ', $abs);
$abs=str_replace('’', '\'', $abs);
foreach ($terms_of_query as $key => $value) {
$abs=str_ireplace($value,'<font color="green"><b> '.$value.'</b></font>',$abs);
}
foreach (array_diff($terms,$terms_of_query) as $key => $value) {
$abs=str_ireplace($value,'<font color="#800000"> '.$value.'</font>',$abs);
}
$output.='<br/><p align="justify"><b>Abstract : </b><i>'.$abs.' </i></p>';
$output.="<br>";
echo $output.$find;
echo '</div>';
//echo '<div id="tabs-2">
// <p><strong>Click this tab again to close the content pane.</strong></p>
// <p>Morbi tincidunt, dui sit amet facilisis feugiat, odio metus gravida ante, ut pharetra massa metus id nunc. Duis scelerisque molestie turpis. Sed fringilla, massa eget luctus malesuada, metus eros molestie lectus, ut tempus eros massa ut dolor. Aenean aliquet fringilla sem. Suspendisse sed ligula in ligula suscipit aliquam. Praesent in eros vestibulum mi adipiscing adipiscing. Morbi facilisis. Curabitur ornare consequat nunc. Aenean vel metus. Ut posuere viverra nulla. Aliquam erat volutpat. Pellentesque convallis. Maecenas feugiat, tellus pellentesque pretium posuere, felis lorem euismod felis, eu ornare leo nisi vel felis. Mauris consectetur tortor et purus.</p>
// </div>';
echo '</div>';
function pt($string){
// juste pour afficher avec retour à la ligne
echo $string."<br/>";
}
function pta($array){
print_r($array);
echo '<br/>';
}
?>
LOCALDB/favorite.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
$db= $_GET["db"];//I receive the specific database as string!
$terms_of_query=json_decode($_GET["query"]);
include('parameters_details.php');
$base = new PDO("sqlite:" .$mainpath.$db);
$query=$_GET["query"];
$gexf=$_GET["gexf"];
$max_tag_could_size=15;
$output = "<ul>"; // string sent to the javascript for display
$type = $_GET["type"];
$sql='SELECT id from favorites';
$wos_ids=array(); // favorite list
$num_favorite=0;
$count=0;
foreach ($base->query($sql) as $row){
$wos_ids[$row['id']] = 1;
$num_favorite+=1;
}
$favorite_keywords=array();
foreach ($wos_ids as $id => $score) {
if ($count<1000){
// retrieve publication year
$sql = 'SELECT data FROM ISIpubdate WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$pubdate=$row['data'];
}
$count+=1;
$output.="<li >";
$sql = 'SELECT data FROM ISItermsListV1 WHERE id='.$id;
foreach ($base->query($sql) as $row) {
if (array_key_exists($row['data'], $favorite_keywords)){
$favorite_keywords[$row['data']]=$favorite_keywords[$row['data']]+1;
}else{
$favorite_keywords[$row['data']]=1;
}
}
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.='<a href="default_doc_details.php?db='.urlencode($db).'&type='.urlencode($_GET["type"]).'&query='.urlencode($query).'&id='.$id.'">'.$row['data']." </a> ";
//this should be the command:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?db='.urlencode($datadb).'&id='.$id.' \')">'.$row['data']." </a> ";
//the old one:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?id='.$id.' \')">'.$row['data']." </a> ";
$external_link="<a href=http://scholar.google.com/scholar?q=".urlencode('"'.$row['data'].'"')." target=blank>".' <img width=20px src="img/gs.png"></a>';
//$output.='<a href="JavaScript:newPopup(''php/doc_details.php?id='.$id.''')"> Link</a>';
}
// get the authors
$sql = 'SELECT data FROM ISIAUTHOR WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.=strtoupper($row['data']).', ';
}
if($project_folder!='nci'){
$output.='('.$pubdate.') ';
}else {
$output.='(2013) ';
}
// get the country
$sql = 'SELECT data FROM ISIkeyword WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$country=$CC[strtoupper($row['data'])];
$output.=strtoupper($country).' ';
}
//<a href="JavaScript:newPopup('http://www.quackit.com/html/html_help.cfm');">Open a popup window</a>'
$output.=$external_link."</li><br>";
}else{
continue;
}
}
arsort($favorite_keywords);
$tag_coud_size=0;
$tag_could='';
foreach ($favorite_keywords as $key => $value) {
if ($tag_coud_size<$max_tag_could_size){
$tag_coud_size+=1;
$tag_could.='<font size="'.(3+log($value)).'">'.$key.', </font>';
}else{
continue;
} # code...
}
$output= '<h3>'.$num_favorite.' favorite items </h3>'.$tag_could.'<br/>'.$output;
echo $output;
function imagestar($score,$factor,$twjs) {
// produit le html des images de score
$star_image = '';
if ($score > .5) {
$star_image = '';
for ($s = 0; $s < min(5,$score/$factor); $s++) {
$star_image.='<img src="libs/img2/star.gif" border="0" >';
}
} else {
$star_image.='<img src="libs/img2/stargrey.gif" border="0">';
}
return $star_image;
}
?>
LOCALDB/full_doc_list.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
include('parameters_details.php');
$db = $gexf_db[$gexf];
$base = new PDO("sqlite:../" .$db);
$output = "<ul>"; // string sent to the javascript for display
#http://localhost/branch_ademe/php/test.php?type=social&query=[%22marwah,%20m%22]
$type = $_GET["type"];
$query = str_replace( '__and__', '&', $_GET["query"] );
$terms_of_query=json_decode($_GET["query"]);
$elems = json_decode($query);
// nombre d'item dans les tables
$sql='SELECT COUNT(*) FROM ISIABSTRACT';
foreach ($base->query($sql) as $row) {
$table_size=$row['COUNT(*)'];
}
$table = "";
$column = "";
$id="";
$twjs=end( explode("/",getcwd()) )."/"; // LOCALDB folder.
if($type=="social"){
$table = "ISIAUTHOR";
$column = "data";
$id = "id";
$restriction='';
$factor=10;// factor for normalisation of stars
}
if($type=="semantic"){
$table = $_GET["index"];
$column = "data";
$id = "id";
$restriction='';
$factor=10;
}
$sql = 'SELECT count(*),'.$id.'
FROM '.$table.' where (';
foreach($elems as $elem){
$sql.=' '.$column.'="'.$elem.'" OR ';
}
#$querynotparsed=$sql;#####
$sql = substr($sql, 0, -3);
$sql = str_replace( ' & ', '" OR '.$column.'="', $sql );
$sql.=')'.$restriction.'
GROUP BY '.$id.'
ORDER BY count('.$id.') DESC
LIMIT 1000';
#$queryparsed=$sql;#####
$wos_ids = array();
$sum=0;
//The final query!
// array of all relevant documents with score
foreach ($base->query($sql) as $row) {
// on pondère le score par le nombre de termes mentionnés par l'article
//$num_rows = $result->numRows();
$wos_ids[$row[$id]] = $row["count(*)"];
$sum = $row["count(*)"] +$sum;
}
//arsort($wos_ids);
$number_doc=ceil(count($wos_ids)/3);
$count=0;
foreach ($wos_ids as $id => $score) {
if ($count<1000){
// retrieve publication year
$sql = 'SELECT data FROM ISIpubdate WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$pubdate=$row['data'];
}
// to filter under some conditions
$to_display=true;
if ($to_display){
$count+=1;
$output.="<li title='".$score."'>";
$output.=imagestar($score,$factor,$twjs).' ';
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id." group by data";
foreach ($base->query($sql) as $row) {
$output.='<a href="default_doc_details.php?gexf='.urlencode($gexf).'&type='.urlencode($_GET["type"]).'&query='.urlencode($query).'&id='.$id.'">'.$row['data']." </a> ";
//this should be the command:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?db='.urlencode($datadb).'&id='.$id.' \')">'.$row['data']." </a> ";
//the old one:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?id='.$id.' \')">'.$row['data']." </a> ";
$external_link="<a href=http://scholar.google.com/scholar?q=".urlencode('"'.$row['data'].'"')." target=blank>".' <img width=20px src="libs/img2/gs.png"></a>';
//$output.='<a href="JavaScript:newPopup(''php/doc_details.php?id='.$id.''')"> Link</a>';
}
// get the authors
$sql = 'SELECT data FROM ISIAUTHOR WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.=strtoupper($row['data']).', ';
}
//<a href="JavaScript:newPopup('http://www.quackit.com/html/html_help.cfm');">Open a popup window</a>'
$output.=$external_link."</li><br>";
}
}else{
continue;
}
}
$output= '<h3>'.$count.' items related to: '.implode(' OR ', $elems).'</h3>'.$output;
echo $output;
function imagestar($score,$factor,$twjs) {
// produit le html des images de score
$star_image = '';
if ($score > .5) {
$star_image = '';
for ($s = 0; $s < min(5,$score/$factor); $s++) {
$star_image.='<img src="libs/img2/star.gif" border="0" >';
}
} else {
$star_image.='<img src="libs/img2/stargrey.gif" border="0">';
}
return $star_image;
}
?>
LOCALDB/full_doc_list2.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
include('parameters_details.php');
$db = $gexf_db[$gexf];
$base = new PDO("sqlite:../" ."data/terrorism/data.db");
echo "sqlite:../" ."data/terrorism/data.db";
$output = "<ul>"; // string sent to the javascript for display
#http://localhost/branch_ademe/php/test.php?type=social&query=[%22marwah,%20m%22]
$type = $_GET["type"];
$query = str_replace( '__and__', '&', $_GET["query"] );
$terms_of_query=json_decode($_GET["query"]);
$elems = json_decode($query);
// nombre d'item dans les tables
$sql='SELECT COUNT(*) FROM ISIABSTRACT';
foreach ($base->query($sql) as $row) {
$table_size=$row['COUNT(*)'];
}
$table = "";
$column = "";
$id="";
$twjs="pasteurapi/"; // submod path of TinaWebJS
if($type=="social"){
$table = "ISIAUTHOR";
$column = "data";
$id = "id";
$restriction='';
$factor=10;// factor for normalisation of stars
}
if($type=="semantic"){
$table = "ISItermsListV1";
$column = "data";
$id = "id";
$restriction='';
$factor=10;
}
$sql = 'SELECT count(*),'.$id.'
FROM '.$table.' where (';
foreach($elems as $elem){
$sql.=' '.$column.'="'.$elem.'" OR ';
}
#$querynotparsed=$sql;#####
$sql = substr($sql, 0, -3);
$sql = str_replace( ' & ', '" OR '.$column.'="', $sql );
$sql.=')'.$restriction.'
GROUP BY '.$id.'
ORDER BY count('.$id.') DESC
LIMIT 1000';
#$queryparsed=$sql;#####
$wos_ids = array();
$sum=0;
//The final query!
// array of all relevant documents with score
foreach ($base->query($sql) as $row) {
// on pondère le score par le nombre de termes mentionnés par l'article
//$num_rows = $result->numRows();
$wos_ids[$row[$id]] = $row["count(*)"];
$sum = $row["count(*)"] +$sum;
}
//arsort($wos_ids);
$number_doc=ceil(count($wos_ids)/3);
$count=0;
foreach ($wos_ids as $id => $score) {
if ($count<1000){
// retrieve publication year
$sql = 'SELECT data FROM ISIpubdate WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$pubdate="2014";
}
// to filter under some conditions
$to_display=true;
if ($to_display){
$count+=1;
$output.="<li title='".$score."'>";
$output.=imagestar($score,$factor,$twjs).' ';
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id." group by data";
foreach ($base->query($sql) as $row) {
$output.='<a href="default_doc_details2.php?gexf='.urlencode($gexf).'&type='.urlencode($_GET["type"]).'&query='.urlencode($query).'&id='.$id.'">'.$row['data']." </a> ";
//this should be the command:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?db='.urlencode($datadb).'&id='.$id.' \')">'.$row['data']." </a> ";
//the old one:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?id='.$id.' \')">'.$row['data']." </a> ";
$external_link="<a href=http://scholar.google.com/scholar?q=".urlencode('"'.$row['data'].'"')." target=blank>".' <img width=20px src="libs/img2/gs.png"></a>';
//$output.='<a href="JavaScript:newPopup(''php/doc_details.php?id='.$id.''')"> Link</a>';
}
// get the authors
$sql = 'SELECT data FROM ISIAUTHOR WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.=strtoupper($row['data']).', ';
}
//<a href="JavaScript:newPopup('http://www.quackit.com/html/html_help.cfm');">Open a popup window</a>'
$output.=$external_link."</li><br>";
}
}else{
continue;
}
}
$output= '<h3>'.$count.' items related to: '.implode(' OR ', $elems).'</h3>'.$output;
echo $output;
function imagestar($score,$factor,$twjs) {
// produit le html des images de score
$star_image = '';
if ($score > .5) {
$star_image = '';
for ($s = 0; $s < min(5,$score/$factor); $s++) {
$star_image.='<img src="libs/img2/star.gif" border="0" >';
}
} else {
$star_image.='<img src="libs/img2/stargrey.gif" border="0">';
}
return $star_image;
}
?>
LOCALDB/full_doc_list_tidf.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
include('parameters_details.php');
$db= $_GET["db"];//I receive the specific database as string!
$query=$_GET["query"];
$gexf=$_GET["gexf"];
$base = new PDO("sqlite:" .$mainpath.$db);
$temp=explode('/',$db);
$project_folder=$temp[1];
$corpora=$temp[count($temp)-2];
$corporadb = new PDO("sqlite:" .$mainpath.'data/'.$corpora.'/'.$corpora.'.sqlite'); //data base with complementary data
$output = "<ul>"; // string sent to the javascript for display
#http://localhost/branch_ademe/php/test.php?type=social&query=[%22marwah,%20m%22]
$type = $_GET["type"];
$query = str_replace( '__and__', '&', $_GET["query"] );
$elems = json_decode($query);
// nombre d'item dans les tables
$sql='SELECT COUNT(*) FROM ISIABSTRACT';
foreach ($base->query($sql) as $row) {
$table_size=$row['COUNT(*)'];
}
///// Specific to rock //////////
// Other restrictions
// extracting the project folder and the year
if (strpos($gexf,'2013')>0){
$year='2013';
$year_filter=true;
}elseif (strpos($gexf,'2012')>0){
$year='2012';
$year_filter=true;
}else{
$year_filter=false;
}
// identification d'une année pour echoing
if($project_folder=='nci'){
$year_filter=true;
}
$table = "";
$column = "";
$id="";
$twjs="tinawebJS/"; // submod path of TinaWebJS
if($type=="social"){
$table = "ISIAUTHOR";
$column = "data";
$id = "id";
$restriction='';
$factor=10;// factor for normalisation of stars
}
if($type=="semantic"){
$table = "ISItermsListV1";
$column = "data";
$id = "id";
$restriction='';
$factor=10;
}
// identification d'une année pour echoing
if($project_folder=='nci'){
$restriction.=" AND ISIpubdate='2013'";
}
$sql = 'SELECT sum(tfidf),id
FROM tfidf where (';
foreach($elems as $elem){
$sql.=' term="'.$elem.'" OR ';
}
#$querynotparsed=$sql;#####
$sql = substr($sql, 0, -3);
$sql = str_replace( ' & ', '" OR term="', $sql );
$sql.=')'.//$restriction.
'GROUP BY '.$id.'
ORDER BY sum(tfidf) DESC
LIMIT 1000';
//echo $sql;
#$queryparsed=$sql;#####
$wos_ids = array();
$sum=0;
//echo $sql;//The final query!
// array of all relevant documents with score
$count=0;
foreach ($corporadb ->query($sql) as $row) {
//if ($count<4*$max_item_displayed){
$wos_ids[$row[$id]] = $row['sum(tfidf)'];//$row["count(*)"];
$sum = $row["count(*)"] +$sum;
//}else{
// continue;
//}
}
//arsort($wos_ids);
$number_doc=ceil(count($wos_ids)/3);
$count=0;
foreach ($wos_ids as $id => $score) {
if ($count<1000){
// retrieve publication year
$sql = 'SELECT data FROM ISIpubdate WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$pubdate=$row['data'];
}
// to filter under some conditions
$to_display=true;
if ($project_folder=='echoing'){
if ($year_filter){
if ($pubdate!=$year){
$to_display=false;
}
}
}elseif($project_folder=='nci'){
if ($year_filter){
if ($pubdate!='2013'){
$to_display=false;
}
}
}
if ($to_display){
$count+=1;
$output.="<li title='".$score."'>";
$output.=imagestar($score,$factor,$twjs).' ';
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.='<a href="default_doc_details.php?db='.urlencode($db).'&type='.urlencode($_GET["type"]).'&query='.urlencode($query).'&id='.$id.'">'.$row['data']." </a> ";
//this should be the command:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?db='.urlencode($datadb).'&id='.$id.' \')">'.$row['data']." </a> ";
//the old one:
//$output.='<a href="JavaScript:newPopup(\''.$twjs.'php/default_doc_details.php?id='.$id.' \')">'.$row['data']." </a> ";
$external_link="<a href=http://scholar.google.com/scholar?q=".urlencode('"'.$row['data'].'"')." target=blank>".' <img width=20px src="libs/img2/gs.png"></a>';
//$output.='<a href="JavaScript:newPopup(''php/doc_details.php?id='.$id.''')"> Link</a>';
}
// get the authors
$sql = 'SELECT data FROM ISIAUTHOR WHERE id='.$id;
foreach ($base->query($sql) as $row) {
$output.=strtoupper($row['data']).', ';
}
if($project_folder!='nci'){
$output.='('.$pubdate.') ';
}else {
$output.='(2013) ';
}
//<a href="JavaScript:newPopup('http://www.quackit.com/html/html_help.cfm');">Open a popup window</a>'
$output.=$external_link."</li><br>";
}
}else{
continue;
}
}
$output= '<h3>'.$count.' items related to: '.implode(' OR ', $elems).'</h3>'.$output;
echo $output;
function imagestar($score,$factor,$twjs) {
// produit le html des images de score
$star_image = '';
if ($score > .5) {
$star_image = '';
for ($s = 0; $s < min(5,$score/$factor); $s++) {
$star_image.='<img src="libs/img2/star.gif" border="0" >';
}
} else {
$star_image.='<img src="libs/img2/stargrey.gif" border="0">';
}
return $star_image;
}
?>
LOCALDB/info_div.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
// manage the dynamical additional information in the left panel.
// ini_set('display_errors',1);
// ini_set('display_startup_errors',1);
// error_reporting(-1);
// exemple call:
// http://blabla/LOCALDB/info_div.php?type=semantic&bi=0&query=[%22Monte%20Carlo%22]&gexf=%22data/AXA/RiskV2PageRank1000.gexf%22&index=ISItermsAxa_2015
include('parameters_details.php');
$max_item_displayed=6;
$base = new PDO("sqlite:../" .$graphdb);
include('default_div.php');
/*
* This function gets the first db name in the data folder
* IT'S NOT SCALABLE! (If you want to use several db's)
*/
function getDB ($directory) {
//$results = array();
$result = "";
$handler = opendir($directory);
while ($file = readdir($handler)) {
if ($file != "." && $file != ".."
&&
((strpos($file,'.db~'))==false && (strpos($file,'.db'))==true )
||
((strpos($file,'.sqlite~'))==false && (strpos($file,'.sqlite'))==true)
) {
//$results[] = $file;
$result = $file;
break;
}
}
closedir($handler);
//return $results;
return $result;
}
?>
LOCALDB/info_div2.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
// manage the dynamical additional information in the left panel.
// include('parameters_details.php');
$gexf= str_replace('"','',$_GET["gexf"]);
$max_item_displayed=6;
$type = $_GET["type"];
$TITLE="ISITITLE";
$query = str_replace( '__and__', '&', $_GET["query"] );
$elems = json_decode($query);
$table = "";
$column = "";
$id="";
$twjs="API_CNRS/"; // submod path of TinaWebJS
if($type=="semantic"){
$table = "ISItermsListV1";
$column = "data";
$id = "id";
$restriction='';
$factor=10;
}
$restriction='';
$factor=10;
$sql="";
if (count($elems)==1){// un seul mot est sélectionné, on compte les mots multiples
$sql = 'SELECT count(*),'.$id.'
FROM '.$table.' where (';
foreach($elems as $elem){
$sql.=' '.$column.'="'.$elem.'" OR ';
}
#$querynotparsed=$sql;#####
$sql = substr($sql, 0, -3);
$sql = str_replace( ' & ', '" OR '.$column.'="', $sql );
$sql.=')'.$restriction.'
GROUP BY '.$id.'
ORDER BY count('.$id.') DESC
LIMIT 1000';
}else{// on compte une seule fois un mot dans un article
$factor=ceil(count($elems)/5); //les scores sont moins haut
$sql='';
foreach($elems as $elem){
$sql.=' '.$column.'="'.$elem.'" OR ';
}
$sql=substr($sql, 0, -3);
$sql='SELECT count(*),id,data FROM (SELECT *
FROM '.$table.' where ('.$sql.')'.$restriction.'
group by id,data) GROUP BY '.$id.'
ORDER BY count('.$id.') DESC
LIMIT 1000 COLLATE NOCASE';
}
// echo $sql."<br>";
$base = new PDO("sqlite:../data/terrorism/data.db");
$wos_ids = array();
$sum=0;
//The final query!
// array of all relevant documents with score
foreach ($base->query($sql) as $row) {
// on pondère le score par le nombre de termes mentionnés par l'article
//$num_rows = $result->numRows();
$wos_ids[$row[$id]] = $row["count(*)"];
$sum = $row["count(*)"] +$sum;
}
// /// nombre de document associés $related
$total_count=0;
$count_max=500;
$number_doc=count($wos_ids);
$count=0;
$all_terms_from_selected_projects=array();// list of terms for the top 6 project selected
// to filter under some conditions
$to_display=true;
$count=0;
foreach ($wos_ids as $id => $score) {
if ($total_count<$count_max) {
// retrieve publication year
if ($to_display){
$total_count+=1;
if ($count<=$max_item_displayed){
$count+=1;
$sql = 'SELECT data FROM ISITITLE WHERE id='.$id.' group by data';
foreach ($base->query($sql) as $row) {
$external_link="<a href=http://google.com/webhp?#q=".urlencode('"'.utf8_decode($row['data']).'"')." target=blank>".' <img width=15px src="libs/img2/google.png"></a>';
$output.="<li title='".$score."'>";
$output.=$external_link.imagestar($score,$factor,$twjs).' ';
$output.='<a href="JavaScript:newPopup(\''.$twjs.'default_doc_details2.php?gexf='.urlencode($gexf).'&query='.urlencode($query).'&type='.urlencode($_GET["type"]).'&id='.$id.' \')">'.htmlentities($row['data'], ENT_QUOTES, "UTF-8")." </a> ";
// $output.='<a>'.htmlentities($row['data'], ENT_QUOTES, "UTF-8")." </a> ";
}
$sql = 'SELECT data FROM ISIDOI WHERE id='.$id.' group by data';
foreach ($base->query($sql) as $row) {
$output.=$external_link.imagestar($score,$factor,$twjs).' ';
$output.='<a href="JavaScript:newPopup(\''.$twjs.'default_doc_details2.php?gexf='.urlencode($gexf).'&query='.urlencode($query).'&type='.urlencode($_GET["type"]).'&id='.$id.' \')">'.htmlentities($row['data'], ENT_QUOTES, "UTF-8")." </a> ";
} // get the authors
$sql2 = 'SELECT data FROM ISIAUTHOR WHERE id='.$id. ' group by data';
foreach ($base->query($sql2) as $row2) {
$output.=(str_replace("\r", "", $row2['data'])).', ';
}
$output = rtrim($output, ", ");
$output.="</li><br>";
}
}
} else{
continue;
}
}
if ($total_count<$count_max){
$related .= $total_count;
}else{
$related .= ">".$count_max;
}
$output .= "</ul>"; #####
// echo $output."<br>";
if($max_item_displayed>$related) $max_item_displayed=$related;
echo $news.'<br/><h4><font color="#0000FF"> Full text of top '.$max_item_displayed.'/'.$related.' related grant proposals:</font></h4>'.$output;
//pt - 301 ; 15.30
/*
* This function gets the first db name in the data folder
* IT'S NOT SCALABLE! (If you want to use several db's)
*/
function getDB ($directory) {
//$results = array();
$result = "";
$handler = opendir($directory);
while ($file = readdir($handler)) {
if ($file != "." && $file != ".."
&&
((strpos($file,'.db~'))==false && (strpos($file,'.db'))==true )
||
((strpos($file,'.sqlite~'))==false && (strpos($file,'.sqlite'))==true)
) {
//$results[] = $file;
$result = $file;
break;
}
}
closedir($handler);
//return $results;
return $result;
}
function imagestar($score,$factor,$twjs) {
// produit le html des images de score
$star_image = '';
if ($score > .5) {
$star_image = '';
for ($s = 0; $s < min(5,$score/$factor); $s++) {
$star_image.='<img src="libs/img2/star.gif" border="0" >';
}
} else {
$star_image.='<img src="libs/img2/stargrey.gif" border="0">';
}
return $star_image;
}
?>
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LOCALDB/js/jquery-ui.css deleted 100755 → 0
View file @ d9bdd0dd
/*! jQuery UI - v1.10.3 - 2013-05-03
* http://jqueryui.com
* Includes: jquery.ui.core.css, jquery.ui.accordion.css, jquery.ui.autocomplete.css, jquery.ui.button.css, jquery.ui.datepicker.css, jquery.ui.dialog.css, jquery.ui.menu.css, jquery.ui.progressbar.css, jquery.ui.resizable.css, jquery.ui.selectable.css, jquery.ui.slider.css, jquery.ui.spinner.css, jquery.ui.tabs.css, jquery.ui.tooltip.css
* To view and modify this theme, visit http://jqueryui.com/themeroller/?ffDefault=Verdana%2CArial%2Csans-serif&fwDefault=normal&fsDefault=1.1em&cornerRadius=4px&bgColorHeader=cccccc&bgTextureHeader=highlight_soft&bgImgOpacityHeader=75&borderColorHeader=aaaaaa&fcHeader=222222&iconColorHeader=222222&bgColorContent=ffffff&bgTextureContent=flat&bgImgOpacityContent=75&borderColorContent=aaaaaa&fcContent=222222&iconColorContent=222222&bgColorDefault=e6e6e6&bgTextureDefault=glass&bgImgOpacityDefault=75&borderColorDefault=d3d3d3&fcDefault=555555&iconColorDefault=888888&bgColorHover=dadada&bgTextureHover=glass&bgImgOpacityHover=75&borderColorHover=999999&fcHover=212121&iconColorHover=454545&bgColorActive=ffffff&bgTextureActive=glass&bgImgOpacityActive=65&borderColorActive=aaaaaa&fcActive=212121&iconColorActive=454545&bgColorHighlight=fbf9ee&bgTextureHighlight=glass&bgImgOpacityHighlight=55&borderColorHighlight=fcefa1&fcHighlight=363636&iconColorHighlight=2e83ff&bgColorError=fef1ec&bgTextureError=glass&bgImgOpacityError=95&borderColorError=cd0a0a&fcError=cd0a0a&iconColorError=cd0a0a&bgColorOverlay=aaaaaa&bgTextureOverlay=flat&bgImgOpacityOverlay=0&opacityOverlay=30&bgColorShadow=aaaaaa&bgTextureShadow=flat&bgImgOpacityShadow=0&opacityShadow=30&thicknessShadow=8px&offsetTopShadow=-8px&offsetLeftShadow=-8px&cornerRadiusShadow=8px
* Copyright 2013 jQuery Foundation and other contributors Licensed MIT */
/* Layout helpers
----------------------------------*/
.ui-helper-hidden {
display: none;
}
.ui-helper-hidden-accessible {
border: 0;
clip: rect(0 0 0 0);
height: 1px;
margin: -1px;
overflow: hidden;
padding: 0;
position: absolute;
width: 1px;
}
.ui-helper-reset {
margin: 0;
padding: 0;
border: 0;
outline: 0;
line-height: 1.3;
text-decoration: none;
font-size: 100%;
list-style: none;
}
.ui-helper-clearfix:before,
.ui-helper-clearfix:after {
content: "";
display: table;
border-collapse: collapse;
}
.ui-helper-clearfix:after {
clear: both;
}
.ui-helper-clearfix {
min-height: 0; /* support: IE7 */
}
.ui-helper-zfix {
width: 100%;
height: 100%;
top: 0;
left: 0;
position: absolute;
opacity: 0;
filter:Alpha(Opacity=0);
}
.ui-front {
z-index: 100;
}
/* Interaction Cues
----------------------------------*/
.ui-state-disabled {
cursor: default !important;
}
/* Icons
----------------------------------*/
/* states and images */
.ui-icon {
display: block;
text-indent: -99999px;
overflow: hidden;
background-repeat: no-repeat;
}
/* Misc visuals
----------------------------------*/
/* Overlays */
.ui-widget-overlay {
position: fixed;
top: 0;
left: 0;
width: 100%;
height: 100%;
}
.ui-accordion .ui-accordion-header {
display: block;
cursor: pointer;
position: relative;
margin-top: 2px;
padding: .5em .5em .5em .7em;
min-height: 0; /* support: IE7 */
}
.ui-accordion .ui-accordion-icons {
padding-left: 2.2em;
}
.ui-accordion .ui-accordion-noicons {
padding-left: .7em;
}
.ui-accordion .ui-accordion-icons .ui-accordion-icons {
padding-left: 2.2em;
}
.ui-accordion .ui-accordion-header .ui-accordion-header-icon {
position: absolute;
left: .5em;
top: 50%;
margin-top: -8px;
}
.ui-accordion .ui-accordion-content {
padding: 1em 2.2em;
border-top: 0;
overflow: auto;
}
.ui-autocomplete {
position: absolute;
top: 0;
left: 0;
cursor: default;
}
.ui-button {
display: inline-block;
position: relative;
padding: 0;
line-height: normal;
margin-right: .1em;
cursor: pointer;
vertical-align: middle;
text-align: center;
overflow: visible; /* removes extra width in IE */
}
.ui-button,
.ui-button:link,
.ui-button:visited,
.ui-button:hover,
.ui-button:active {
text-decoration: none;
}
/* to make room for the icon, a width needs to be set here */
.ui-button-icon-only {
width: 2.2em;
}
/* button elements seem to need a little more width */
button.ui-button-icon-only {
width: 2.4em;
}
.ui-button-icons-only {
width: 3.4em;
}
button.ui-button-icons-only {
width: 3.7em;
}
/* button text element */
.ui-button .ui-button-text {
display: block;
line-height: normal;
}
.ui-button-text-only .ui-button-text {
padding: .4em 1em;
}
.ui-button-icon-only .ui-button-text,
.ui-button-icons-only .ui-button-text {
padding: .4em;
text-indent: -9999999px;
}
.ui-button-text-icon-primary .ui-button-text,
.ui-button-text-icons .ui-button-text {
padding: .4em 1em .4em 2.1em;
}
.ui-button-text-icon-secondary .ui-button-text,
.ui-button-text-icons .ui-button-text {
padding: .4em 2.1em .4em 1em;
}
.ui-button-text-icons .ui-button-text {
padding-left: 2.1em;
padding-right: 2.1em;
}
/* no icon support for input elements, provide padding by default */
input.ui-button {
padding: .4em 1em;
}
/* button icon element(s) */
.ui-button-icon-only .ui-icon,
.ui-button-text-icon-primary .ui-icon,
.ui-button-text-icon-secondary .ui-icon,
.ui-button-text-icons .ui-icon,
.ui-button-icons-only .ui-icon {
position: absolute;
top: 50%;
margin-top: -8px;
}
.ui-button-icon-only .ui-icon {
left: 50%;
margin-left: -8px;
}
.ui-button-text-icon-primary .ui-button-icon-primary,
.ui-button-text-icons .ui-button-icon-primary,
.ui-button-icons-only .ui-button-icon-primary {
left: .5em;
}
.ui-button-text-icon-secondary .ui-button-icon-secondary,
.ui-button-text-icons .ui-button-icon-secondary,
.ui-button-icons-only .ui-button-icon-secondary {
right: .5em;
}
/* button sets */
.ui-buttonset {
margin-right: 7px;
}
.ui-buttonset .ui-button {
margin-left: 0;
margin-right: -.3em;
}
/* workarounds */
/* reset extra padding in Firefox, see h5bp.com/l */
input.ui-button::-moz-focus-inner,
button.ui-button::-moz-focus-inner {
border: 0;
padding: 0;
}
.ui-datepicker {
width: 17em;
padding: .2em .2em 0;
display: none;
}
.ui-datepicker .ui-datepicker-header {
position: relative;
padding: .2em 0;
}
.ui-datepicker .ui-datepicker-prev,
.ui-datepicker .ui-datepicker-next {
position: absolute;
top: 2px;
width: 1.8em;
height: 1.8em;
}
.ui-datepicker .ui-datepicker-prev-hover,
.ui-datepicker .ui-datepicker-next-hover {
top: 1px;
}
.ui-datepicker .ui-datepicker-prev {
left: 2px;
}
.ui-datepicker .ui-datepicker-next {
right: 2px;
}
.ui-datepicker .ui-datepicker-prev-hover {
left: 1px;
}
.ui-datepicker .ui-datepicker-next-hover {
right: 1px;
}
.ui-datepicker .ui-datepicker-prev span,
.ui-datepicker .ui-datepicker-next span {
display: block;
position: absolute;
left: 50%;
margin-left: -8px;
top: 50%;
margin-top: -8px;
}
.ui-datepicker .ui-datepicker-title {
margin: 0 2.3em;
line-height: 1.8em;
text-align: center;
}
.ui-datepicker .ui-datepicker-title select {
font-size: 1em;
margin: 1px 0;
}
.ui-datepicker select.ui-datepicker-month-year {
width: 100%;
}
.ui-datepicker select.ui-datepicker-month,
.ui-datepicker select.ui-datepicker-year {
width: 49%;
}
.ui-datepicker table {
width: 100%;
font-size: .9em;
border-collapse: collapse;
margin: 0 0 .4em;
}
.ui-datepicker th {
padding: .7em .3em;
text-align: center;
font-weight: bold;
border: 0;
}
.ui-datepicker td {
border: 0;
padding: 1px;
}
.ui-datepicker td span,
.ui-datepicker td a {
display: block;
padding: .2em;
text-align: right;
text-decoration: none;
}
.ui-datepicker .ui-datepicker-buttonpane {
background-image: none;
margin: .7em 0 0 0;
padding: 0 .2em;
border-left: 0;
border-right: 0;
border-bottom: 0;
}
.ui-datepicker .ui-datepicker-buttonpane button {
float: right;
margin: .5em .2em .4em;
cursor: pointer;
padding: .2em .6em .3em .6em;
width: auto;
overflow: visible;
}
.ui-datepicker .ui-datepicker-buttonpane button.ui-datepicker-current {
float: left;
}
/* with multiple calendars */
.ui-datepicker.ui-datepicker-multi {
width: auto;
}
.ui-datepicker-multi .ui-datepicker-group {
float: left;
}
.ui-datepicker-multi .ui-datepicker-group table {
width: 95%;
margin: 0 auto .4em;
}
.ui-datepicker-multi-2 .ui-datepicker-group {
width: 50%;
}
.ui-datepicker-multi-3 .ui-datepicker-group {
width: 33.3%;
}
.ui-datepicker-multi-4 .ui-datepicker-group {
width: 25%;
}
.ui-datepicker-multi .ui-datepicker-group-last .ui-datepicker-header,
.ui-datepicker-multi .ui-datepicker-group-middle .ui-datepicker-header {
border-left-width: 0;
}
.ui-datepicker-multi .ui-datepicker-buttonpane {
clear: left;
}
.ui-datepicker-row-break {
clear: both;
width: 100%;
font-size: 0;
}
/* RTL support */
.ui-datepicker-rtl {
direction: rtl;
}
.ui-datepicker-rtl .ui-datepicker-prev {
right: 2px;
left: auto;
}
.ui-datepicker-rtl .ui-datepicker-next {
left: 2px;
right: auto;
}
.ui-datepicker-rtl .ui-datepicker-prev:hover {
right: 1px;
left: auto;
}
.ui-datepicker-rtl .ui-datepicker-next:hover {
left: 1px;
right: auto;
}
.ui-datepicker-rtl .ui-datepicker-buttonpane {
clear: right;
}
.ui-datepicker-rtl .ui-datepicker-buttonpane button {
float: left;
}
.ui-datepicker-rtl .ui-datepicker-buttonpane button.ui-datepicker-current,
.ui-datepicker-rtl .ui-datepicker-group {
float: right;
}
.ui-datepicker-rtl .ui-datepicker-group-last .ui-datepicker-header,
.ui-datepicker-rtl .ui-datepicker-group-middle .ui-datepicker-header {
border-right-width: 0;
border-left-width: 1px;
}
.ui-dialog {
position: absolute;
top: 0;
left: 0;
padding: .2em;
outline: 0;
}
.ui-dialog .ui-dialog-titlebar {
padding: .4em 1em;
position: relative;
}
.ui-dialog .ui-dialog-title {
float: left;
margin: .1em 0;
white-space: nowrap;
width: 90%;
overflow: hidden;
text-overflow: ellipsis;
}
.ui-dialog .ui-dialog-titlebar-close {
position: absolute;
right: .3em;
top: 50%;
width: 21px;
margin: -10px 0 0 0;
padding: 1px;
height: 20px;
}
.ui-dialog .ui-dialog-content {
position: relative;
border: 0;
padding: .5em 1em;
background: none;
overflow: auto;
}
.ui-dialog .ui-dialog-buttonpane {
text-align: left;
border-width: 1px 0 0 0;
background-image: none;
margin-top: .5em;
padding: .3em 1em .5em .4em;
}
.ui-dialog .ui-dialog-buttonpane .ui-dialog-buttonset {
float: right;
}
.ui-dialog .ui-dialog-buttonpane button {
margin: .5em .4em .5em 0;
cursor: pointer;
}
.ui-dialog .ui-resizable-se {
width: 12px;
height: 12px;
right: -5px;
bottom: -5px;
background-position: 16px 16px;
}
.ui-draggable .ui-dialog-titlebar {
cursor: move;
}
.ui-menu {
list-style: none;
padding: 2px;
margin: 0;
display: block;
outline: none;
}
.ui-menu .ui-menu {
margin-top: -3px;
position: absolute;
}
.ui-menu .ui-menu-item {
margin: 0;
padding: 0;
width: 100%;
/* support: IE10, see #8844 */
list-style-image: url(data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7);
}
.ui-menu .ui-menu-divider {
margin: 5px -2px 5px -2px;
height: 0;
font-size: 0;
line-height: 0;
border-width: 1px 0 0 0;
}
.ui-menu .ui-menu-item a {
text-decoration: none;
display: block;
padding: 2px .4em;
line-height: 1.5;
min-height: 0; /* support: IE7 */
font-weight: normal;
}
.ui-menu .ui-menu-item a.ui-state-focus,
.ui-menu .ui-menu-item a.ui-state-active {
font-weight: normal;
margin: -1px;
}
.ui-menu .ui-state-disabled {
font-weight: normal;
margin: .4em 0 .2em;
line-height: 1.5;
}
.ui-menu .ui-state-disabled a {
cursor: default;
}
/* icon support */
.ui-menu-icons {
position: relative;
}
.ui-menu-icons .ui-menu-item a {
position: relative;
padding-left: 2em;
}
/* left-aligned */
.ui-menu .ui-icon {
position: absolute;
top: .2em;
left: .2em;
}
/* right-aligned */
.ui-menu .ui-menu-icon {
position: static;
float: right;
}
.ui-progressbar {
height: 2em;
text-align: left;
overflow: hidden;
}
.ui-progressbar .ui-progressbar-value {
margin: -1px;
height: 100%;
}
.ui-progressbar .ui-progressbar-overlay {
background: url("images/animated-overlay.gif");
height: 100%;
filter: alpha(opacity=25);
opacity: 0.25;
}
.ui-progressbar-indeterminate .ui-progressbar-value {
background-image: none;
}
.ui-resizable {
position: relative;
}
.ui-resizable-handle {
position: absolute;
font-size: 0.1px;
display: block;
}
.ui-resizable-disabled .ui-resizable-handle,
.ui-resizable-autohide .ui-resizable-handle {
display: none;
}
.ui-resizable-n {
cursor: n-resize;
height: 7px;
width: 100%;
top: -5px;
left: 0;
}
.ui-resizable-s {
cursor: s-resize;
height: 7px;
width: 100%;
bottom: -5px;
left: 0;
}
.ui-resizable-e {
cursor: e-resize;
width: 7px;
right: -5px;
top: 0;
height: 100%;
}
.ui-resizable-w {
cursor: w-resize;
width: 7px;
left: -5px;
top: 0;
height: 100%;
}
.ui-resizable-se {
cursor: se-resize;
width: 12px;
height: 12px;
right: 1px;
bottom: 1px;
}
.ui-resizable-sw {
cursor: sw-resize;
width: 9px;
height: 9px;
left: -5px;
bottom: -5px;
}
.ui-resizable-nw {
cursor: nw-resize;
width: 9px;
height: 9px;
left: -5px;
top: -5px;
}
.ui-resizable-ne {
cursor: ne-resize;
width: 9px;
height: 9px;
right: -5px;
top: -5px;
}
.ui-selectable-helper {
position: absolute;
z-index: 100;
border: 1px dotted black;
}
.ui-slider {
position: relative;
text-align: left;
}
.ui-slider .ui-slider-handle {
position: absolute;
z-index: 2;
width: 1.2em;
height: 1.2em;
cursor: default;
}
.ui-slider .ui-slider-range {
position: absolute;
z-index: 1;
font-size: .7em;
display: block;
border: 0;
background-position: 0 0;
}
/* For IE8 - See #6727 */
.ui-slider.ui-state-disabled .ui-slider-handle,
.ui-slider.ui-state-disabled .ui-slider-range {
filter: inherit;
}
.ui-slider-horizontal {
height: .8em;
}
.ui-slider-horizontal .ui-slider-handle {
top: -.3em;
margin-left: -.6em;
}
.ui-slider-horizontal .ui-slider-range {
top: 0;
height: 100%;
}
.ui-slider-horizontal .ui-slider-range-min {
left: 0;
}
.ui-slider-horizontal .ui-slider-range-max {
right: 0;
}
.ui-slider-vertical {
width: .8em;
height: 100px;
}
.ui-slider-vertical .ui-slider-handle {
left: -.3em;
margin-left: 0;
margin-bottom: -.6em;
}
.ui-slider-vertical .ui-slider-range {
left: 0;
width: 100%;
}
.ui-slider-vertical .ui-slider-range-min {
bottom: 0;
}
.ui-slider-vertical .ui-slider-range-max {
top: 0;
}
.ui-spinner {
position: relative;
display: inline-block;
overflow: hidden;
padding: 0;
vertical-align: middle;
}
.ui-spinner-input {
border: none;
background: none;
color: inherit;
padding: 0;
margin: .2em 0;
vertical-align: middle;
margin-left: .4em;
margin-right: 22px;
}
.ui-spinner-button {
width: 16px;
height: 50%;
font-size: .5em;
padding: 0;
margin: 0;
text-align: center;
position: absolute;
cursor: default;
display: block;
overflow: hidden;
right: 0;
}
/* more specificity required here to overide default borders */
.ui-spinner a.ui-spinner-button {
border-top: none;
border-bottom: none;
border-right: none;
}
/* vertical centre icon */
.ui-spinner .ui-icon {
position: absolute;
margin-top: -8px;
top: 50%;
left: 0;
}
.ui-spinner-up {
top: 0;
}
.ui-spinner-down {
bottom: 0;
}
/* TR overrides */
.ui-spinner .ui-icon-triangle-1-s {
/* need to fix icons sprite */
background-position: -65px -16px;
}
.ui-tabs {
position: relative;/* position: relative prevents IE scroll bug (element with position: relative inside container with overflow: auto appear as "fixed") */
padding: .2em;
}
.ui-tabs .ui-tabs-nav {
margin: 0;
padding: .2em .2em 0;
}
.ui-tabs .ui-tabs-nav li {
list-style: none;
float: left;
position: relative;
top: 0;
margin: 1px .2em 0 0;
border-bottom-width: 0;
padding: 0;
white-space: nowrap;
}
.ui-tabs .ui-tabs-nav li a {
float: left;
padding: .5em 1em;
text-decoration: none;
}
.ui-tabs .ui-tabs-nav li.ui-tabs-active {
margin-bottom: -1px;
padding-bottom: 1px;
}
.ui-tabs .ui-tabs-nav li.ui-tabs-active a,
.ui-tabs .ui-tabs-nav li.ui-state-disabled a,
.ui-tabs .ui-tabs-nav li.ui-tabs-loading a {
cursor: text;
}
.ui-tabs .ui-tabs-nav li a, /* first selector in group seems obsolete, but required to overcome bug in Opera applying cursor: text overall if defined elsewhere... */
.ui-tabs-collapsible .ui-tabs-nav li.ui-tabs-active a {
cursor: pointer;
}
.ui-tabs .ui-tabs-panel {
display: block;
border-width: 0;
padding: 1em 1.4em;
background: none;
}
.ui-tooltip {
padding: 8px;
position: absolute;
z-index: 9999;
max-width: 300px;
-webkit-box-shadow: 0 0 5px #aaa;
box-shadow: 0 0 5px #aaa;
}
body .ui-tooltip {
border-width: 2px;
}
/* Component containers
----------------------------------*/
.ui-widget {
font-family: Verdana,Arial,sans-serif;
font-size: 1.1em;
}
.ui-widget .ui-widget {
font-size: 1em;
}
.ui-widget input,
.ui-widget select,
.ui-widget textarea,
.ui-widget button {
font-family: Verdana,Arial,sans-serif;
font-size: 1em;
}
.ui-widget-content {
border: 1px solid #aaaaaa;
background: #ffffff url(images/ui-bg_flat_75_ffffff_40x100.png) 50% 50% repeat-x;
color: #222222;
}
.ui-widget-content a {
color: #222222;
}
.ui-widget-header {
border: 1px solid #aaaaaa;
background: #cccccc url(images/ui-bg_highlight-soft_75_cccccc_1x100.png) 50% 50% repeat-x;
color: #222222;
font-weight: bold;
}
.ui-widget-header a {
color: #222222;
}
/* Interaction states
----------------------------------*/
.ui-state-default,
.ui-widget-content .ui-state-default,
.ui-widget-header .ui-state-default {
border: 1px solid #d3d3d3;
background: #e6e6e6 url(images/ui-bg_glass_75_e6e6e6_1x400.png) 50% 50% repeat-x;
font-weight: normal;
color: #555555;
}
.ui-state-default a,
.ui-state-default a:link,
.ui-state-default a:visited {
color: #555555;
text-decoration: none;
}
.ui-state-hover,
.ui-widget-content .ui-state-hover,
.ui-widget-header .ui-state-hover,
.ui-state-focus,
.ui-widget-content .ui-state-focus,
.ui-widget-header .ui-state-focus {
border: 1px solid #999999;
background: #dadada url(images/ui-bg_glass_75_dadada_1x400.png) 50% 50% repeat-x;
font-weight: normal;
color: #212121;
}
.ui-state-hover a,
.ui-state-hover a:hover,
.ui-state-hover a:link,
.ui-state-hover a:visited {
color: #212121;
text-decoration: none;
}
.ui-state-active,
.ui-widget-content .ui-state-active,
.ui-widget-header .ui-state-active {
border: 1px solid #aaaaaa;
background: #ffffff url(images/ui-bg_glass_65_ffffff_1x400.png) 50% 50% repeat-x;
font-weight: normal;
color: #212121;
}
.ui-state-active a,
.ui-state-active a:link,
.ui-state-active a:visited {
color: #212121;
text-decoration: none;
}
/* Interaction Cues
----------------------------------*/
.ui-state-highlight,
.ui-widget-content .ui-state-highlight,
.ui-widget-header .ui-state-highlight {
border: 1px solid #fcefa1;
background: #fbf9ee url(images/ui-bg_glass_55_fbf9ee_1x400.png) 50% 50% repeat-x;
color: #363636;
}
.ui-state-highlight a,
.ui-widget-content .ui-state-highlight a,
.ui-widget-header .ui-state-highlight a {
color: #363636;
}
.ui-state-error,
.ui-widget-content .ui-state-error,
.ui-widget-header .ui-state-error {
border: 1px solid #cd0a0a;
background: #fef1ec url(images/ui-bg_glass_95_fef1ec_1x400.png) 50% 50% repeat-x;
color: #cd0a0a;
}
.ui-state-error a,
.ui-widget-content .ui-state-error a,
.ui-widget-header .ui-state-error a {
color: #cd0a0a;
}
.ui-state-error-text,
.ui-widget-content .ui-state-error-text,
.ui-widget-header .ui-state-error-text {
color: #cd0a0a;
}
.ui-priority-primary,
.ui-widget-content .ui-priority-primary,
.ui-widget-header .ui-priority-primary {
font-weight: bold;
}
.ui-priority-secondary,
.ui-widget-content .ui-priority-secondary,
.ui-widget-header .ui-priority-secondary {
opacity: .7;
filter:Alpha(Opacity=70);
font-weight: normal;
}
.ui-state-disabled,
.ui-widget-content .ui-state-disabled,
.ui-widget-header .ui-state-disabled {
opacity: .35;
filter:Alpha(Opacity=35);
background-image: none;
}
.ui-state-disabled .ui-icon {
filter:Alpha(Opacity=35); /* For IE8 - See #6059 */
}
/* Icons
----------------------------------*/
/* states and images */
.ui-icon {
width: 16px;
height: 16px;
}
.ui-icon,
.ui-widget-content .ui-icon {
background-image: url(images/ui-icons_222222_256x240.png);
}
.ui-widget-header .ui-icon {
background-image: url(images/ui-icons_222222_256x240.png);
}
.ui-state-default .ui-icon {
background-image: url(images/ui-icons_888888_256x240.png);
}
.ui-state-hover .ui-icon,
.ui-state-focus .ui-icon {
background-image: url(images/ui-icons_454545_256x240.png);
}
.ui-state-active .ui-icon {
background-image: url(images/ui-icons_454545_256x240.png);
}
.ui-state-highlight .ui-icon {
background-image: url(images/ui-icons_2e83ff_256x240.png);
}
.ui-state-error .ui-icon,
.ui-state-error-text .ui-icon {
background-image: url(images/ui-icons_cd0a0a_256x240.png);
}
/* positioning */
.ui-icon-blank { background-position: 16px 16px; }
.ui-icon-carat-1-n { background-position: 0 0; }
.ui-icon-carat-1-ne { background-position: -16px 0; }
.ui-icon-carat-1-e { background-position: -32px 0; }
.ui-icon-carat-1-se { background-position: -48px 0; }
.ui-icon-carat-1-s { background-position: -64px 0; }
.ui-icon-carat-1-sw { background-position: -80px 0; }
.ui-icon-carat-1-w { background-position: -96px 0; }
.ui-icon-carat-1-nw { background-position: -112px 0; }
.ui-icon-carat-2-n-s { background-position: -128px 0; }
.ui-icon-carat-2-e-w { background-position: -144px 0; }
.ui-icon-triangle-1-n { background-position: 0 -16px; }
.ui-icon-triangle-1-ne { background-position: -16px -16px; }
.ui-icon-triangle-1-e { background-position: -32px -16px; }
.ui-icon-triangle-1-se { background-position: -48px -16px; }
.ui-icon-triangle-1-s { background-position: -64px -16px; }
.ui-icon-triangle-1-sw { background-position: -80px -16px; }
.ui-icon-triangle-1-w { background-position: -96px -16px; }
.ui-icon-triangle-1-nw { background-position: -112px -16px; }
.ui-icon-triangle-2-n-s { background-position: -128px -16px; }
.ui-icon-triangle-2-e-w { background-position: -144px -16px; }
.ui-icon-arrow-1-n { background-position: 0 -32px; }
.ui-icon-arrow-1-ne { background-position: -16px -32px; }
.ui-icon-arrow-1-e { background-position: -32px -32px; }
.ui-icon-arrow-1-se { background-position: -48px -32px; }
.ui-icon-arrow-1-s { background-position: -64px -32px; }
.ui-icon-arrow-1-sw { background-position: -80px -32px; }
.ui-icon-arrow-1-w { background-position: -96px -32px; }
.ui-icon-arrow-1-nw { background-position: -112px -32px; }
.ui-icon-arrow-2-n-s { background-position: -128px -32px; }
.ui-icon-arrow-2-ne-sw { background-position: -144px -32px; }
.ui-icon-arrow-2-e-w { background-position: -160px -32px; }
.ui-icon-arrow-2-se-nw { background-position: -176px -32px; }
.ui-icon-arrowstop-1-n { background-position: -192px -32px; }
.ui-icon-arrowstop-1-e { background-position: -208px -32px; }
.ui-icon-arrowstop-1-s { background-position: -224px -32px; }
.ui-icon-arrowstop-1-w { background-position: -240px -32px; }
.ui-icon-arrowthick-1-n { background-position: 0 -48px; }
.ui-icon-arrowthick-1-ne { background-position: -16px -48px; }
.ui-icon-arrowthick-1-e { background-position: -32px -48px; }
.ui-icon-arrowthick-1-se { background-position: -48px -48px; }
.ui-icon-arrowthick-1-s { background-position: -64px -48px; }
.ui-icon-arrowthick-1-sw { background-position: -80px -48px; }
.ui-icon-arrowthick-1-w { background-position: -96px -48px; }
.ui-icon-arrowthick-1-nw { background-position: -112px -48px; }
.ui-icon-arrowthick-2-n-s { background-position: -128px -48px; }
.ui-icon-arrowthick-2-ne-sw { background-position: -144px -48px; }
.ui-icon-arrowthick-2-e-w { background-position: -160px -48px; }
.ui-icon-arrowthick-2-se-nw { background-position: -176px -48px; }
.ui-icon-arrowthickstop-1-n { background-position: -192px -48px; }
.ui-icon-arrowthickstop-1-e { background-position: -208px -48px; }
.ui-icon-arrowthickstop-1-s { background-position: -224px -48px; }
.ui-icon-arrowthickstop-1-w { background-position: -240px -48px; }
.ui-icon-arrowreturnthick-1-w { background-position: 0 -64px; }
.ui-icon-arrowreturnthick-1-n { background-position: -16px -64px; }
.ui-icon-arrowreturnthick-1-e { background-position: -32px -64px; }
.ui-icon-arrowreturnthick-1-s { background-position: -48px -64px; }
.ui-icon-arrowreturn-1-w { background-position: -64px -64px; }
.ui-icon-arrowreturn-1-n { background-position: -80px -64px; }
.ui-icon-arrowreturn-1-e { background-position: -96px -64px; }
.ui-icon-arrowreturn-1-s { background-position: -112px -64px; }
.ui-icon-arrowrefresh-1-w { background-position: -128px -64px; }
.ui-icon-arrowrefresh-1-n { background-position: -144px -64px; }
.ui-icon-arrowrefresh-1-e { background-position: -160px -64px; }
.ui-icon-arrowrefresh-1-s { background-position: -176px -64px; }
.ui-icon-arrow-4 { background-position: 0 -80px; }
.ui-icon-arrow-4-diag { background-position: -16px -80px; }
.ui-icon-extlink { background-position: -32px -80px; }
.ui-icon-newwin { background-position: -48px -80px; }
.ui-icon-refresh { background-position: -64px -80px; }
.ui-icon-shuffle { background-position: -80px -80px; }
.ui-icon-transfer-e-w { background-position: -96px -80px; }
.ui-icon-transferthick-e-w { background-position: -112px -80px; }
.ui-icon-folder-collapsed { background-position: 0 -96px; }
.ui-icon-folder-open { background-position: -16px -96px; }
.ui-icon-document { background-position: -32px -96px; }
.ui-icon-document-b { background-position: -48px -96px; }
.ui-icon-note { background-position: -64px -96px; }
.ui-icon-mail-closed { background-position: -80px -96px; }
.ui-icon-mail-open { background-position: -96px -96px; }
.ui-icon-suitcase { background-position: -112px -96px; }
.ui-icon-comment { background-position: -128px -96px; }
.ui-icon-person { background-position: -144px -96px; }
.ui-icon-print { background-position: -160px -96px; }
.ui-icon-trash { background-position: -176px -96px; }
.ui-icon-locked { background-position: -192px -96px; }
.ui-icon-unlocked { background-position: -208px -96px; }
.ui-icon-bookmark { background-position: -224px -96px; }
.ui-icon-tag { background-position: -240px -96px; }
.ui-icon-home { background-position: 0 -112px; }
.ui-icon-flag { background-position: -16px -112px; }
.ui-icon-calendar { background-position: -32px -112px; }
.ui-icon-cart { background-position: -48px -112px; }
.ui-icon-pencil { background-position: -64px -112px; }
.ui-icon-clock { background-position: -80px -112px; }
.ui-icon-disk { background-position: -96px -112px; }
.ui-icon-calculator { background-position: -112px -112px; }
.ui-icon-zoomin { background-position: -128px -112px; }
.ui-icon-zoomout { background-position: -144px -112px; }
.ui-icon-search { background-position: -160px -112px; }
.ui-icon-wrench { background-position: -176px -112px; }
.ui-icon-gear { background-position: -192px -112px; }
.ui-icon-heart { background-position: -208px -112px; }
.ui-icon-star { background-position: -224px -112px; }
.ui-icon-link { background-position: -240px -112px; }
.ui-icon-cancel { background-position: 0 -128px; }
.ui-icon-plus { background-position: -16px -128px; }
.ui-icon-plusthick { background-position: -32px -128px; }
.ui-icon-minus { background-position: -48px -128px; }
.ui-icon-minusthick { background-position: -64px -128px; }
.ui-icon-close { background-position: -80px -128px; }
.ui-icon-closethick { background-position: -96px -128px; }
.ui-icon-key { background-position: -112px -128px; }
.ui-icon-lightbulb { background-position: -128px -128px; }
.ui-icon-scissors { background-position: -144px -128px; }
.ui-icon-clipboard { background-position: -160px -128px; }
.ui-icon-copy { background-position: -176px -128px; }
.ui-icon-contact { background-position: -192px -128px; }
.ui-icon-image { background-position: -208px -128px; }
.ui-icon-video { background-position: -224px -128px; }
.ui-icon-script { background-position: -240px -128px; }
.ui-icon-alert { background-position: 0 -144px; }
.ui-icon-info { background-position: -16px -144px; }
.ui-icon-notice { background-position: -32px -144px; }
.ui-icon-help { background-position: -48px -144px; }
.ui-icon-check { background-position: -64px -144px; }
.ui-icon-bullet { background-position: -80px -144px; }
.ui-icon-radio-on { background-position: -96px -144px; }
.ui-icon-radio-off { background-position: -112px -144px; }
.ui-icon-pin-w { background-position: -128px -144px; }
.ui-icon-pin-s { background-position: -144px -144px; }
.ui-icon-play { background-position: 0 -160px; }
.ui-icon-pause { background-position: -16px -160px; }
.ui-icon-seek-next { background-position: -32px -160px; }
.ui-icon-seek-prev { background-position: -48px -160px; }
.ui-icon-seek-end { background-position: -64px -160px; }
.ui-icon-seek-start { background-position: -80px -160px; }
/* ui-icon-seek-first is deprecated, use ui-icon-seek-start instead */
.ui-icon-seek-first { background-position: -80px -160px; }
.ui-icon-stop { background-position: -96px -160px; }
.ui-icon-eject { background-position: -112px -160px; }
.ui-icon-volume-off { background-position: -128px -160px; }
.ui-icon-volume-on { background-position: -144px -160px; }
.ui-icon-power { background-position: 0 -176px; }
.ui-icon-signal-diag { background-position: -16px -176px; }
.ui-icon-signal { background-position: -32px -176px; }
.ui-icon-battery-0 { background-position: -48px -176px; }
.ui-icon-battery-1 { background-position: -64px -176px; }
.ui-icon-battery-2 { background-position: -80px -176px; }
.ui-icon-battery-3 { background-position: -96px -176px; }
.ui-icon-circle-plus { background-position: 0 -192px; }
.ui-icon-circle-minus { background-position: -16px -192px; }
.ui-icon-circle-close { background-position: -32px -192px; }
.ui-icon-circle-triangle-e { background-position: -48px -192px; }
.ui-icon-circle-triangle-s { background-position: -64px -192px; }
.ui-icon-circle-triangle-w { background-position: -80px -192px; }
.ui-icon-circle-triangle-n { background-position: -96px -192px; }
.ui-icon-circle-arrow-e { background-position: -112px -192px; }
.ui-icon-circle-arrow-s { background-position: -128px -192px; }
.ui-icon-circle-arrow-w { background-position: -144px -192px; }
.ui-icon-circle-arrow-n { background-position: -160px -192px; }
.ui-icon-circle-zoomin { background-position: -176px -192px; }
.ui-icon-circle-zoomout { background-position: -192px -192px; }
.ui-icon-circle-check { background-position: -208px -192px; }
.ui-icon-circlesmall-plus { background-position: 0 -208px; }
.ui-icon-circlesmall-minus { background-position: -16px -208px; }
.ui-icon-circlesmall-close { background-position: -32px -208px; }
.ui-icon-squaresmall-plus { background-position: -48px -208px; }
.ui-icon-squaresmall-minus { background-position: -64px -208px; }
.ui-icon-squaresmall-close { background-position: -80px -208px; }
.ui-icon-grip-dotted-vertical { background-position: 0 -224px; }
.ui-icon-grip-dotted-horizontal { background-position: -16px -224px; }
.ui-icon-grip-solid-vertical { background-position: -32px -224px; }
.ui-icon-grip-solid-horizontal { background-position: -48px -224px; }
.ui-icon-gripsmall-diagonal-se { background-position: -64px -224px; }
.ui-icon-grip-diagonal-se { background-position: -80px -224px; }
/* Misc visuals
----------------------------------*/
/* Corner radius */
.ui-corner-all,
.ui-corner-top,
.ui-corner-left,
.ui-corner-tl {
border-top-left-radius: 4px;
}
.ui-corner-all,
.ui-corner-top,
.ui-corner-right,
.ui-corner-tr {
border-top-right-radius: 4px;
}
.ui-corner-all,
.ui-corner-bottom,
.ui-corner-left,
.ui-corner-bl {
border-bottom-left-radius: 4px;
}
.ui-corner-all,
.ui-corner-bottom,
.ui-corner-right,
.ui-corner-br {
border-bottom-right-radius: 4px;
}
/* Overlays */
.ui-widget-overlay {
background: #aaaaaa url(images/ui-bg_flat_0_aaaaaa_40x100.png) 50% 50% repeat-x;
opacity: .3;
filter: Alpha(Opacity=30);
}
.ui-widget-shadow {
margin: -8px 0 0 -8px;
padding: 8px;
background: #aaaaaa url(images/ui-bg_flat_0_aaaaaa_40x100.png) 50% 50% repeat-x;
opacity: .3;
filter: Alpha(Opacity=30);
border-radius: 8px;
}
LOCALDB/js/jquery-ui.js deleted 100755 → 0
View file @ d9bdd0dd
This source diff could not be displayed because it is too large. You can view the blob instead.
LOCALDB/listFiles.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
header ("Content-Type:application/json");
//$string = getcwd();
//$string = str_replace("/php","",$string);
$string=dirname(dirname(getcwd())); // ProjectExplorer folder name: /var/www/ademe
//$files = getDirectoryList($string."/data");
include("DirectoryScanner.php");
$projectFolderPat = dirname(dirname(getcwd())) . "/";
$instance = new scanTree($projectFolderPat);
$instance->getDirectoryTree("data");
$gexfs=$instance->gexf_folder;
$files=array();
foreach($gexfs as $key => $value){
array_push($files,$key);
}
$filesSorted=array();
foreach($files as $file){
array_push($filesSorted,$file);
}
sort($filesSorted);
echo json_encode($filesSorted);
function getDirectoryList ($directory) {
$results = array();
$handler = opendir($directory);
while ($file = readdir($handler)) {
if ($file != "." && $file != ".." &&
(strpos($file,'.gexf~'))==false &&
(strpos($file,'.gexf'))==true) {
$results[] = $file;
}
}
closedir($handler);
return $results;
}
?>
LOCALDB/parameters_details.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
# £TODO WTF ??? => move params to settings_explorerjs ???
$gexf_db = array();
# $gexf_db["data/terrorism/terrorism_bi.gexf"] = "data/terrorism/data.db";
# $gexf_db["data/ClimateChange/ClimateChangeV1.gexf"] = "data/ClimateChange/wosclimatechange-61715-1-wosclimatechange-db(2).db";
$gexf_db["data/ClimateChange/Maps_S_800.gexf"] = "data/ClimateChange/wos_climate-change_title_2014-2015.db";
$gexf_db["data/AXA/RiskV2PageRank1000.gexf"] = "data/AXA/data.db";
$gexf_db["data/AXA/RiskV2PageRank2500.gexf"] = "data/AXA/data.db";
$gexf_db["data/AXA/RiskV2PageRank5000.gexf"] = "data/AXA/data.db";
// TESTS
$gexf_db["data/ProgrammeDesCandidats.gexf"] = "foobar";
$gexf= str_replace('"','',$_GET["gexf"]);
$mainpath=dirname(getcwd())."/";
$graphdb = $gexf_db[$gexf];
?>
LOCALDB/tfidf.php deleted 100755 → 0
View file @ d9bdd0dd
<?php
echo '<meta http-equiv="Content-type" content="text/html; charset=UTF-8"/>';
// compute the tfidf score for each terms for each document for cortext like databases and store them in a specific table
//include('parameters_details.php');
$db = new PDO("sqlite:graph.db");
$database_name='echoing.sqlite';
$project_base = new PDO("sqlite:" .$database_name);
// Table creation
// efface la base existante
$project_base->exec("DROP TABLE IF EXIST tfidf");
pt("creation of tfidf table");
//on crée un table pour les infos de clusters
$project_base->exec("CREATE TABLE tfidf (id NUMERIC,term TEXT,tfidf NUMERIC)");
//generating number of mention of terms in the corpora
$terms_freq=array();
pt('processing terms frequency');
$sql='SELECT count(*),data FROM ISItermsListV1 group by data';
foreach ($db->query($sql) as $term) {
$terms_freq[$term['data']]=$term['count(*)'];
}
pt('processing number of doc');
// nombre d'iterator_apply(iterator, function)em dans les tables
$sql='SELECT COUNT(*) FROM ISIABSTRACT';
foreach ($db->query($sql) as $row) {
$table_size=$row['COUNT(*)'];
}
pt($table_size.' documents in database');
// select all the doc
$sql='SELECT * FROM ISIABSTRACT';
foreach ($db->query($sql) as $doc) {
$id=$doc['id'];
pt($id);
//select all the terms of that document with their occurrences
$sql2="SELECT count(*),data FROM ISItermsListV1 where id='".$id."' group by data";
// for each term we compute the tfidf
foreach ($db->query($sql2) as $term_data) {
$term=$term_data['data'];
$term_occ_in_doc=$term_data['count(*)'];
$terms_tfidf=log(1+$term_occ_in_doc)*log($table_size/$terms_freq[$term]);
$query='INSERT INTO tfidf (id,term,tfidf) VALUES ('.$id.',"'.$term.'",'.$terms_tfidf.')';
$project_base->query($query);
}
}
function pt ($string) {
echo $string.'<br/>';
}
?>
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