Deterministic Phylo tests

test-data/phylo/187481.json

@@ -10,7 +10,7 @@
             "_csv_limit": 150000,
             "tag": "Csv"
         },
-        "corpusPath": "/Users/adinapoli/work/clients/CNRS/haskell-gargantext/adinapoli-wip2/./test-data/phylo/GarganText_DocsList-nodeId-187481.csv",
+        "corpusPath": "test-data/phylo/GarganText_DocsList-nodeId-187481.csv",
         "defaultMode": false,
         "exportFilter": [
             {
@@ -35,7 +35,7 @@
         },
         "findAncestors": true,
         "listParser": "V3",
-        "listPath": "/Users/adinapoli/work/clients/CNRS/haskell-gargantext/adinapoli-wip2/./test-data/phylo/GarganText_NgramsList-187482.csv",
+        "listPath": "test-data/phylo/GarganText_NgramsList-187482.csv",
         "outputPath": "data/",
         "phyloName": "Phylo Name",
         "phyloQuality": {
@@ -1640,4 +1640,4 @@
         "style": "filled"
     },
     "pd_listId": 187482
-}
\ No newline at end of file
+}

test-data/phylo/small-phylo.golden.json

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+      "pos": "138.12,713.38",
+      "shape": "box",
+      "strFrom": "\"2016-10-31\"",
+      "strTo": "\"2016-10-31\"",
+      "to": "24203",
+      "width": "3.8368"
+    },
+    {
+      "_gvid": 8,
+      "fontsize": "50",
+      "from": "24202",
+      "height": "0.89236",
+      "label": "24202 24204",
+      "name": "period2420224204",
+      "nodeType": "period",
+      "pos": "138.12,577.12",
+      "shape": "box",
+      "strFrom": "\"2017-01-01\"",
+      "strTo": "\"2017-01-03\"",
+      "to": "24204",
+      "width": "3.8368"
+    },
+    {
+      "_gvid": 9,
+      "fontsize": "50",
+      "from": "24203",
+      "height": "0.89236",
+      "label": "24203 24205",
+      "name": "period2420324205",
+      "nodeType": "period",
+      "pos": "138.12,440.88",
+      "shape": "box",
+      "strFrom": "\"\"",
+      "strTo": "\"\"",
+      "to": "24205",
+      "width": "3.8368"
+    },
+    {
+      "_gvid": 10,
+      "fontsize": "50",
+      "from": "24204",
+      "height": "0.89236",
+      "label": "24204 24206",
+      "name": "period2420424206",
+      "nodeType": "period",
+      "pos": "138.12,304.62",
+      "shape": "box",
+      "strFrom": "\"\"",
+      "strTo": "\"\"",
+      "to": "24206",
+      "width": "3.8368"
+    },
+    {
+      "_gvid": 11,
+      "fontsize": "50",
+      "from": "24205",
+      "height": "0.89236",
+      "label": "24205 24207",
+      "name": "period2420524207",
+      "nodeType": "period",
+      "pos": "138.12,168.38",
+      "shape": "box",
+      "strFrom": "\"\"",
+      "strTo": "\"\"",
+      "to": "24207",
+      "width": "3.8368"
+    },
+    {
+      "_gvid": 12,
+      "fontsize": "50",
+      "from": "24206",
+      "height": "0.89236",
+      "label": "24206 24208",
+      "name": "period2420624208",
+      "nodeType": "period",
+      "pos": "138.12,32.125",
+      "shape": "box",
+      "strFrom": "\"2017-05-01\"",
+      "strTo": "\"2017-05-25\"",
+      "to": "24208",
+      "width": "3.8368"
+    }
+  ],
+  "overlap": "scale",
+  "phyloBranches": "0",
+  "phyloDocs": "9.0",
+  "phyloFoundations": "67",
+  "phyloGroups": "0",
+  "phyloPeriods": "6",
+  "phyloQuality": "0.0",
+  "phyloSeaRiseStart": "0.0",
+  "phyloSeaRiseSteps": "0.1",
+  "phyloSources": "[]",
+  "phyloTerms": "0",
+  "phyloTimeScale": "week",
+  "rank": "same",
+  "ranksep": "1",
+  "ratio": "fill",
+  "splines": "spline",
+  "strict": false,
+  "style": "filled"
+}

test/Test/Offline/Phylo.hs

@@ -56,15 +56,15 @@ phyloConfig = PhyloConfig {
   , exportFilter = [ByBranchSize {_branch_size = 3.0}]
   }
 
-tests :: HasCallStack => TestTree
+tests :: TestTree
 tests = testGroup "Phylo" [
   testGroup "Export" [
       testCase "ngramsToLabel respects encoding" test_ngramsToLabel_01
     , testCase "ngramsToLabel is rendered correctly in CustomAttribute" test_ngramsToLabel_02
   ]
   , testGroup "toPhyloWithoutLink" [
-    testProperty "returns expected data" testSmallPhyloWithoutLinkExpectedOutput
-  , testProperty "phyloCleopatre returns expected data" testCleopatreWithoutLinkExpectedOutput
+    testCase "returns expected data" testSmallPhyloWithoutLinkExpectedOutput
+  , testCase "phyloCleopatre returns expected data" testCleopatreWithoutLinkExpectedOutput
   ]
   , testGroup "phylo2dot2json" [
     testCase "is deterministic" testPhylo2dot2json
@@ -78,28 +78,31 @@ tests = testGroup "Phylo" [
   ]
   ]
 
-testCleopatreWithoutLinkExpectedOutput :: HasCallStack => Property
-testCleopatreWithoutLinkExpectedOutput = monadicIO $ do
-  actual   <- pure $ toPhyloWithoutLink Cleopatre.docs Cleopatre.config
-  expected <- run $ readPhylo =<< getDataFileName "test-data/phylo/cleopatre.golden.json"
-  pure $ counterexample (show $ ansiWlEditExpr $ ediff' expected actual) (expected === actual)
+testCleopatreWithoutLinkExpectedOutput :: Assertion
+testCleopatreWithoutLinkExpectedOutput = do
+  let actual = toPhyloWithoutLink Cleopatre.docs Cleopatre.config
+  expected <- readPhylo =<< getDataFileName "test-data/phylo/cleopatre.golden.json"
+  assertBool (show $ ansiWlEditExpr $ ediff' expected actual) (expected == actual)
 
-testSmallPhyloWithoutLinkExpectedOutput :: Property
-testSmallPhyloWithoutLinkExpectedOutput = monadicIO $ do
-  bpaConfig      <- run $ getDataFileName "bench-data/phylo/bpa-config.json"
-  corpusPath'    <- run $ getDataFileName "test-data/phylo/small_phylo_docslist.csv"
-  listPath'      <- run $ getDataFileName "test-data/phylo/small_phylo_ngramslist.csv"
+testSmallPhyloWithoutLinkExpectedOutput :: Assertion
+testSmallPhyloWithoutLinkExpectedOutput = do
+  bpaConfig      <- getDataFileName "bench-data/phylo/bpa-config.json"
+  corpusPath'    <- getDataFileName "test-data/phylo/small_phylo_docslist.csv"
+  listPath'      <- getDataFileName "test-data/phylo/small_phylo_ngramslist.csv"
   (Right config) <- fmap (\pcfg -> pcfg { corpusPath = corpusPath'
                                         , listPath   = listPath'
-                                        }) <$> (run $ eitherDecodeFileStrict' bpaConfig)
-  mapList <- run $ fileToList (listParser config) (listPath config)
-  corpus <- run $ fileToDocsDefault (corpusParser config)
-                              (corpusPath config)
-                              [Year 3 1 5,Month 3 1 5,Week 4 2 5]
-                              mapList
-  actual   <- pure $ toPhyloWithoutLink corpus config
-  expected <- run $ readPhylo =<< getDataFileName "test-data/phylo/small-phylo.golden.json"
-  pure $ counterexample (show $ ansiWlEditExpr $ ediff' expected actual) (expected === actual)
+                                        }) <$> (eitherDecodeFileStrict' bpaConfig)
+  mapList <- fileToList (listParser config) (listPath config)
+  corpus <- fileToDocsDefault (corpusParser config)
+                        (corpusPath config)
+                        [Year 3 1 5,Month 3 1 5,Week 4 2 5]
+                        mapList
+  actual <- phylo2dot2json (toPhyloWithoutLink corpus config)
+  expected_e <- JSON.eitherDecodeFileStrict' =<< getDataFileName "test-data/phylo/small-phylo.golden.json"
+  case expected_e of
+    Left err -> fail err
+    Right (expected :: JSON.Value) -> do
+      assertBool (show $ ansiWlEditExpr $ ediff' expected actual) (expected == actual)
 
 testPhylo2dot2json :: Assertion
 testPhylo2dot2json = do

test/drivers/tasty/Main.hs

@@ -29,7 +29,7 @@ import qualified Test.Core.Similarity         as Similarity
 import Test.Tasty
 import Test.Tasty.Hspec
 
-main :: HasCallStack => IO ()
+main :: IO ()
 main = do
   utilSpec         <- testSpec "Utils" Utils.test
   clusteringSpec   <- testSpec "Graph Clustering" Graph.test