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haskell-gargantext
haskell-gargantext
Verified Commit a059fd1c authored by Przemyslaw Kaminski's avatar Przemyslaw Kaminski
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[test] fix golden tests 

Also, fix README since we merged tasty/hspec tests recently.
parent 7c5ddfa4
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          README.md
          View file @ a059fd1c
          ...@@ -196,7 +196,7 @@ Here are some tips: ...@@ -196,7 +196,7 @@ Here are some tips:
          * Lock the hackage-index state in the `cabal.project`, so that the * Lock the hackage-index state in the `cabal.project`, so that the
          solver won't try to pull newer dependencies; solver won't try to pull newer dependencies;
          * Specify constraints you want directly when building like `cabal * Specify constraints you want directly when building like `cabal
          v2-build --constraint tasty==x.y.z.w` v2-build --constraint hspec==x.y.z.w`
          * Generate another `.freeze` with `cabal v2-freeze` once you got the * Generate another `.freeze` with `cabal v2-freeze` once you got the
          new build to compile (this is good for small, incremental upgrades) new build to compile (this is good for small, incremental upgrades)
          * Bounds in `.cabal` are definitely respected, but ofc the `.freeze` * Bounds in `.cabal` are definitely respected, but ofc the `.freeze`
          ...@@ -250,16 +250,9 @@ Or, from "outside": ...@@ -250,16 +250,9 @@ Or, from "outside":
          $ nix-shell --run "cabal v2-test --test-show-details=streaming" $ nix-shell --run "cabal v2-test --test-show-details=streaming"
          ``` ```
          If you want to run particular tests, use (for Tasty): If you want to run particular tests, use:
          ```shell
          cabal v2-test garg-test-tasty --test-show-details=streaming --test-option=--pattern='/job status update and tracking/
          ```
          or (for Hspec):
          ```shell ```shell
          cabal v2-test garg-test-hspec --test-show-details=streaming --test-option=--match='/Dispatcher, Central Exchange, WebSockets/' cabal v2-test garg-test --test-show-details=streaming --test-option=--match='/job status update and tracking/
          ``` ```
          ### CI ### CI
          ...@@ -447,7 +440,6 @@ a useful `:ggload` macro that imports all exposed modules from the ...@@ -447,7 +440,6 @@ a useful `:ggload` macro that imports all exposed modules from the
          ## Running the tests <a name="running-tests"></a> ## Running the tests <a name="running-tests"></a>
          Running the tests can be done via the following command: Running the tests can be done via the following command:
          ```shell ```shell
          cabal v2-test --test-show-details=streaming --flags 'test-crypto no-phylo-debug-logs' cabal v2-test --test-show-details=streaming --flags 'test-crypto no-phylo-debug-logs'
          ``` ```
          ...@@ -458,28 +450,22 @@ The flags have the following meaning: ...@@ -458,28 +450,22 @@ The flags have the following meaning:
          faster; faster;
          * `no-phylo-debug-logs`: Suppresses the debugging logs which would normally be present in phylo pure (!) code. * `no-phylo-debug-logs`: Suppresses the debugging logs which would normally be present in phylo pure (!) code.
          In order for some tests to run (like the phylo ones) is **required** to install the `gargantext-cli` via: **NOTE**: Using the above flags will cause rebuild, if you just build with `cabal v2-build`. Run with:
          ```shell
          cabal v2-install gargantext:exe:gargantext
          ```
          For tasty, if you want to run specific test (via patterns), use:
          ```shell ```shell
          cabal v2-run garg-test-tasty -- -p '/Ngrams/ cabal v2-test --test-show-details=streaming
          ``` ```
          so you don't rebuild.
          For integration tests, do: If you want to run specific test (via patterns), use:
          ```shell ```shell
          cabal v2-test garg-test-hspec --test-show-details=streaming --test-option=--match='/some pattern/' cabal v2-run garg-test --test-show-details=streaming --test-option=--match='/Ngrams/'
          ``` ```
          You could also use [ghciwatch](https://mercurytechnologies.github.io/ghciwatch/) for testsing: You could also use [ghciwatch](https://mercurytechnologies.github.io/ghciwatch/) for testsing:
          ```shell ```shell
          ghciwatch --command "cabal v2-repl garg-test-tasty" --after-startup-ghci ':set args "--pattern" "/Ngrams/"' --after-startup-ghci "Main.main" --after-reload-ghci "Main.main" --watch src --watch test ghciwatch --command "cabal v2-repl garg-test" --after-startup-ghci ':set args "--match" "/Ngrams/"' --after-startup-ghci "Main.main" --after-reload-ghci "Main.main" --watch src --watch test
          ``` ```
          ### Modifying a golden test to accept a new (expected) output ### Modifying a golden test to accept a new (expected) output
          ...@@ -487,11 +473,16 @@ ghciwatch --command "cabal v2-repl garg-test-tasty" --after-startup-ghci ':set a ...@@ -487,11 +473,16 @@ ghciwatch --command "cabal v2-repl garg-test-tasty" --after-startup-ghci ':set a
          Some tests, like the Phylo one, use golden testing to ensure that the JSON Phylo we generate is Some tests, like the Phylo one, use golden testing to ensure that the JSON Phylo we generate is
          the same as an expected one. This allows us to catch regressions in the serialisation or in the algorithm. the same as an expected one. This allows us to catch regressions in the serialisation or in the algorithm.
          Sometimes, however, we genuinely want to modify the output so that it's the new reference (i.e. the new Sometimes, however, we genuinely want to modify the output so that it's the new reference (i.e. the new
          golden reference). To do so, it's enough to run the testsuite passing the `--accept` flag, for example: golden reference).
          If you do want to update the output, go to `test/Test/Offline/Phylo.hs` and set `doUpdateGolden = True`.
          Run tests:
          ```shell ```shell
          cabal v2-test garg-test-tasty --test-show-details=streaming --flags 'test-crypto no-phylo-debug-logs' --test-option=--pattern='/Phylo/' --test-option=--accept cabal v2-test garg-test --test-show-details=streaming --test-option=--match='/Phylo/'
          ``` ```
          The second time you run tests, they should pass.
          **Don't forget to set `doUpdateGolden = False` after updating the golden files!**
          # Async workers <a name="async-workers"></a> # Async workers <a name="async-workers"></a>
          ......
          test-data/phylo/phylo2dot2json.golden.json
          View file @ a059fd1c
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          "color": "white", "color": "white",
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          "height": "0.92361", "height": "0.89236",
          "label": "52 54", "label": "52 54",
          "name": "period5254", "name": "period5254",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,1329.8", "pos": "1280.8,1325.2",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "54", "to": "54",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 114, "_gvid": 114,
          ...@@ -3443,7 +3443,7 @@ ...@@ -3443,7 +3443,7 @@
          "name": "group525421", "name": "group525421",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "887.75,1329.8", "pos": "887.75,1325.2",
          "role": "\"0.0 | 0.0\"", "role": "\"0.0 | 0.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3469,7 +3469,7 @@ ...@@ -3469,7 +3469,7 @@
          "name": "group525422", "name": "group525422",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "719.75,1329.8", "pos": "719.75,1325.2",
          "role": "\"0.0 | 0.0 | 0.0\"", "role": "\"0.0 | 0.0 | 0.0\"",
          "seaLvl": "[0.0,1.0]", "seaLvl": "[0.0,1.0]",
          "shape": "square", "shape": "square",
          ...@@ -3485,16 +3485,16 @@ ...@@ -3485,16 +3485,16 @@
          "_gvid": 116, "_gvid": 116,
          "fontsize": "50", "fontsize": "50",
          "from": "53", "from": "53",
          "height": "0.92361", "height": "0.89236",
          "label": "53 55", "label": "53 55",
          "name": "period5355", "name": "period5355",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,1162.2", "pos": "1280.8,1157.8",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "55", "to": "55",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 117, "_gvid": 117,
          ...@@ -3510,7 +3510,7 @@ ...@@ -3510,7 +3510,7 @@
          "name": "group535520", "name": "group535520",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "1055.8,1162.2", "pos": "1055.8,1157.8",
          "role": "\"1.0 | 0.0\"", "role": "\"1.0 | 0.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3536,7 +3536,7 @@ ...@@ -3536,7 +3536,7 @@
          "name": "group535521", "name": "group535521",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "887.75,1162.2", "pos": "887.75,1157.8",
          "role": "\"3.0 | 3.0\"", "role": "\"3.0 | 3.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3562,7 +3562,7 @@ ...@@ -3562,7 +3562,7 @@
          "name": "group535522", "name": "group535522",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "551.75,1162.2", "pos": "551.75,1157.8",
          "role": "\"1.0 | 3.0 | 0.0\"", "role": "\"1.0 | 3.0 | 0.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3588,7 +3588,7 @@ ...@@ -3588,7 +3588,7 @@
          "name": "group535523", "name": "group535523",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "719.75,1162.2", "pos": "719.75,1157.8",
          "role": "\"3.0 | 3.0 | 3.0\"", "role": "\"3.0 | 3.0 | 3.0\"",
          "seaLvl": "[0.0,1.0]", "seaLvl": "[0.0,1.0]",
          "shape": "square", "shape": "square",
          ...@@ -3604,16 +3604,16 @@ ...@@ -3604,16 +3604,16 @@
          "_gvid": 121, "_gvid": 121,
          "fontsize": "50", "fontsize": "50",
          "from": "54", "from": "54",
          "height": "0.92361", "height": "0.89236",
          "label": "54 56", "label": "54 56",
          "name": "period5456", "name": "period5456",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,994.75", "pos": "1280.8,990.25",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "56", "to": "56",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 122, "_gvid": 122,
          ...@@ -3629,7 +3629,7 @@ ...@@ -3629,7 +3629,7 @@
          "name": "group545620", "name": "group545620",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "887.75,994.75", "pos": "887.75,990.25",
          "role": "\"3.0 | 2.0\"", "role": "\"3.0 | 2.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3655,7 +3655,7 @@ ...@@ -3655,7 +3655,7 @@
          "name": "group545621", "name": "group545621",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "719.75,994.75", "pos": "719.75,990.25",
          "role": "\"3.0 | 3.0 | 2.0\"", "role": "\"3.0 | 3.0 | 2.0\"",
          "seaLvl": "[0.0,1.0]", "seaLvl": "[0.0,1.0]",
          "shape": "square", "shape": "square",
          ...@@ -3681,7 +3681,7 @@ ...@@ -3681,7 +3681,7 @@
          "name": "group545622", "name": "group545622",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "551.75,994.75", "pos": "551.75,990.25",
          "role": "\"3.0 | 3.0 | 2.0\"", "role": "\"3.0 | 3.0 | 2.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3707,7 +3707,7 @@ ...@@ -3707,7 +3707,7 @@
          "name": "group545623", "name": "group545623",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "383.75,994.75", "pos": "383.75,990.25",
          "role": "\"3.0 | 3.0 | 0.0 | 3.0\"", "role": "\"3.0 | 3.0 | 0.0 | 3.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3723,16 +3723,16 @@ ...@@ -3723,16 +3723,16 @@
          "_gvid": 126, "_gvid": 126,
          "fontsize": "50", "fontsize": "50",
          "from": "55", "from": "55",
          "height": "0.92361", "height": "0.89236",
          "label": "55 57", "label": "55 57",
          "name": "period5557", "name": "period5557",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,827.25", "pos": "1280.8,822.75",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "57", "to": "57",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 127, "_gvid": 127,
          ...@@ -3748,7 +3748,7 @@ ...@@ -3748,7 +3748,7 @@
          "name": "group555720", "name": "group555720",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "215.75,827.25", "pos": "215.75,822.75",
          "role": "\"3.0 | 3.0 | 3.0\"", "role": "\"3.0 | 3.0 | 3.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3774,7 +3774,7 @@ ...@@ -3774,7 +3774,7 @@
          "name": "group555721", "name": "group555721",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "383.75,827.25", "pos": "383.75,822.75",
          "role": "\"3.0 | 3.0 | 2.0 | 3.0\"", "role": "\"3.0 | 3.0 | 2.0 | 3.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3790,16 +3790,16 @@ ...@@ -3790,16 +3790,16 @@
          "_gvid": 129, "_gvid": 129,
          "fontsize": "50", "fontsize": "50",
          "from": "56", "from": "56",
          "height": "0.92361", "height": "0.89236",
          "label": "56 58", "label": "56 58",
          "name": "period5658", "name": "period5658",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,659.75", "pos": "1280.8,655.25",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "58", "to": "58",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 130, "_gvid": 130,
          ...@@ -3815,7 +3815,7 @@ ...@@ -3815,7 +3815,7 @@
          "name": "group565820", "name": "group565820",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "383.75,659.75", "pos": "383.75,655.25",
          "role": "\"3.0 | 3.0 | 2.0\"", "role": "\"3.0 | 3.0 | 2.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3841,7 +3841,7 @@ ...@@ -3841,7 +3841,7 @@
          "name": "group565821", "name": "group565821",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "47.75,659.75", "pos": "47.75,655.25",
          "role": "\"3.0 | 3.0 | 0.0\"", "role": "\"3.0 | 3.0 | 0.0\"",
          "seaLvl": "[0.0,1.0]", "seaLvl": "[0.0,1.0]",
          "shape": "square", "shape": "square",
          ...@@ -3867,7 +3867,7 @@ ...@@ -3867,7 +3867,7 @@
          "name": "group565822", "name": "group565822",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "215.75,659.75", "pos": "215.75,655.25",
          "role": "\"3.0 | 3.0 | 2.0\"", "role": "\"3.0 | 3.0 | 2.0\"",
          "seaLvl": "[0.0]", "seaLvl": "[0.0]",
          "shape": "square", "shape": "square",
          ...@@ -3883,16 +3883,16 @@ ...@@ -3883,16 +3883,16 @@
          "_gvid": 133, "_gvid": 133,
          "fontsize": "50", "fontsize": "50",
          "from": "57", "from": "57",
          "height": "0.92361", "height": "0.89236",
          "label": "57 59", "label": "57 59",
          "name": "period5759", "name": "period5759",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,492.25", "pos": "1280.8,487.75",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "59", "to": "59",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 134, "_gvid": 134,
          ...@@ -3908,7 +3908,7 @@ ...@@ -3908,7 +3908,7 @@
          "name": "group575920", "name": "group575920",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "47.75,492.25", "pos": "47.75,487.75",
          "role": "\"3.0 | 3.0 | 3.0\"", "role": "\"3.0 | 3.0 | 3.0\"",
          "seaLvl": "[0.0,1.0]", "seaLvl": "[0.0,1.0]",
          "shape": "square", "shape": "square",
          ...@@ -3924,16 +3924,16 @@ ...@@ -3924,16 +3924,16 @@
          "_gvid": 135, "_gvid": 135,
          "fontsize": "50", "fontsize": "50",
          "from": "58", "from": "58",
          "height": "0.92361", "height": "0.89236",
          "label": "58 60", "label": "58 60",
          "name": "period5860", "name": "period5860",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,324.75", "pos": "1280.8,320.25",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "60", "to": "60",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 136, "_gvid": 136,
          ...@@ -3949,7 +3949,7 @@ ...@@ -3949,7 +3949,7 @@
          "name": "group586021", "name": "group586021",
          "nodeType": "group", "nodeType": "group",
          "penwidth": "4", "penwidth": "4",
          "pos": "47.75,324.75", "pos": "47.75,320.25",
          "role": "\"2.0 | 3.0 | 2.0\"", "role": "\"2.0 | 3.0 | 2.0\"",
          "seaLvl": "[0.0,1.0]", "seaLvl": "[0.0,1.0]",
          "shape": "square", "shape": "square",
          ...@@ -3965,31 +3965,31 @@ ...@@ -3965,31 +3965,31 @@
          "_gvid": 137, "_gvid": 137,
          "fontsize": "50", "fontsize": "50",
          "from": "59", "from": "59",
          "height": "0.92361", "height": "0.89236",
          "label": "59 61", "label": "59 61",
          "name": "period5961", "name": "period5961",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,171.75", "pos": "1280.8,168.38",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "61", "to": "61",
          "width": "2.191" "width": "1.7743"
          }, },
          { {
          "_gvid": 138, "_gvid": 138,
          "fontsize": "50", "fontsize": "50",
          "from": "60", "from": "60",
          "height": "0.92361", "height": "0.89236",
          "label": "60 62", "label": "60 62",
          "name": "period6062", "name": "period6062",
          "nodeType": "period", "nodeType": "period",
          "pos": "1295.8,33.25", "pos": "1280.8,32.125",
          "shape": "box", "shape": "box",
          "strFrom": "\"\"", "strFrom": "\"\"",
          "strTo": "\"\"", "strTo": "\"\"",
          "to": "62", "to": "62",
          "width": "2.191" "width": "1.7743"
          } }
          ], ],
          "overlap": "scale", "overlap": "scale",
          ......
          test-data/phylo/small-phylo.golden.json
          View file @ a059fd1c
          This source diff could not be displayed because it is too large. You can view the blob instead.
          test/Test/Offline/Phylo.hs
          View file @ a059fd1c
          ...@@ -5,6 +5,7 @@ ...@@ -5,6 +5,7 @@
          module Test.Offline.Phylo (tests) where module Test.Offline.Phylo (tests) where
          import CLI.Phylo.Common ( fileToList, fileToDocsDefault ) import CLI.Phylo.Common ( fileToList, fileToDocsDefault )
          import Control.Monad (when)
          import Data.Aeson as JSON import Data.Aeson as JSON
          import Data.Aeson.Encode.Pretty qualified as JSON import Data.Aeson.Encode.Pretty qualified as JSON
          import Data.Aeson.Types qualified as JSON import Data.Aeson.Types qualified as JSON
          ...@@ -29,6 +30,12 @@ import Test.HUnit ...@@ -29,6 +30,12 @@ import Test.HUnit
          import Test.Hspec import Test.Hspec
          import Test.Hspec.Golden import Test.Hspec.Golden
          -- | Switch to 'True' if you want to update golden tests
          doUpdateGolden :: Bool
          doUpdateGolden = False
          phyloTestConfig :: PhyloConfig phyloTestConfig :: PhyloConfig
          phyloTestConfig = PhyloConfig { phyloTestConfig = PhyloConfig {
          corpusPath = "corpus.csv" corpusPath = "corpus.csv"
          ...@@ -58,7 +65,7 @@ phyloGolden (fp, actualOutput) = ...@@ -58,7 +65,7 @@ phyloGolden (fp, actualOutput) =
          Golden { Golden {
          output = actualOutput output = actualOutput
          , encodePretty = C8.unpack . BIO.toStrict , encodePretty = C8.unpack . BIO.toStrict
          , writeToFile = \_ _ -> pure () , writeToFile = if doUpdateGolden then \_ new' -> BL.writeFile fp new' else (\_ _ -> pure ())
          , readFromFile = BIO.readFile , readFromFile = BIO.readFile
          , goldenFile = fp , goldenFile = fp
          , actualFile = Nothing , actualFile = Nothing
          ...@@ -156,6 +163,7 @@ testSmallPhyloWithoutLinkExpectedOutput = do ...@@ -156,6 +163,7 @@ testSmallPhyloWithoutLinkExpectedOutput = do
          mapList mapList
          let actual = setConfig phyloTestConfig $ toPhyloWithoutLink corpus config let actual = setConfig phyloTestConfig $ toPhyloWithoutLink corpus config
          expected <- setConfig phyloTestConfig <$> (readPhylo =<< getDataFileName "test-data/phylo/small-phylo.golden.json") expected <- setConfig phyloTestConfig <$> (readPhylo =<< getDataFileName "test-data/phylo/small-phylo.golden.json")
          when doUpdateGolden $ BL.writeFile "test-data/phylo/small-phylo.golden.json" (JSON.encodePretty actual)
          assertBool (show $ ansiWlEditExprCompact $ ediff expected actual) (expected == actual) assertBool (show $ ansiWlEditExprCompact $ ediff expected actual) (expected == actual)
          testPhylo2dot2json :: IO (FilePath, GraphDataFuzzy) testPhylo2dot2json :: IO (FilePath, GraphDataFuzzy)
          ......
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