Commit adf09142 authored by qlobbe's avatar qlobbe

fix accuracy

parent 09db0b41
Pipeline #589 failed with stage
...@@ -125,7 +125,7 @@ defaultConfig = ...@@ -125,7 +125,7 @@ defaultConfig =
, phyloLevel = 2 , phyloLevel = 2
, phyloProximity = WeightedLogJaccard 10 0 0.1 , phyloProximity = WeightedLogJaccard 10 0 0.1
, phyloSynchrony = ByProximityDistribution 0 , phyloSynchrony = ByProximityDistribution 0
, phyloQuality = Quality 0.1 1 , phyloQuality = Quality 0.5 3
, timeUnit = Year 3 1 5 , timeUnit = Year 3 1 5
, contextualUnit = Fis 1 5 , contextualUnit = Fis 1 5
, exportLabel = [BranchLabel MostInclusive 2, GroupLabel MostEmergentInclusive 2] , exportLabel = [BranchLabel MostInclusive 2, GroupLabel MostEmergentInclusive 2]
......
...@@ -182,13 +182,15 @@ exportToDot phylo export = ...@@ -182,13 +182,15 @@ exportToDot phylo export =
graphAttrs [Rank SameRank] graphAttrs [Rank SameRank]
-- | 3) group the branches by hierarchy -- | 3) group the branches by hierarchy
mapM (\branches -> -- mapM (\branches ->
subgraph (Str "Branches clade") $ do -- subgraph (Str "Branches clade") $ do
graphAttrs [Rank SameRank] -- graphAttrs [Rank SameRank]
-- -- | 4) create a node for each branch
-- mapM branchToDotNode branches
-- ) $ elems $ fromListWith (++) $ map (\b -> ((init . snd) $ b ^. branch_id,[b])) $ export ^. export_branches
-- | 4) create a node for each branch mapM branchToDotNode $ export ^. export_branches
mapM branchToDotNode branches
) $ elems $ fromListWith (++) $ map (\b -> ((init . snd) $ b ^. branch_id,[b])) $ export ^. export_branches
-- | 5) create a layer for each period -- | 5) create a layer for each period
_ <- mapM (\period -> _ <- mapM (\period ->
......
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