Merge branch 'dev-warnings-cleanup' into dev

.psc-package/local/.set/packages.json

@@ -2729,7 +2729,7 @@
       "node-fs"
     ],
     "repo": "https://github.com/purescript-spec/purescript-spec-discovery",
-    "version": "v3.1.0"
+    "version": "v4.0.0"
   },
   "spec-quickcheck": {
     "dependencies": [

dist/styles/Graph.css

@@ -12,7 +12,7 @@
 }
 #graph-explorer #sp-container {
   position: absolute;
-  left: 63%;
+  left: 70%;
   top: 150px;
   z-index: 1;
   border: 1px white solid;

dist/styles/Graph.sass

@@ -12,7 +12,7 @@
 
   #sp-container
     position: absolute
-    left: 63%
+    left: 70%
     top: 150px
     z-index: 1
     border: 1px white solid

package.json

@@ -8,7 +8,8 @@
         "sass": "sass dist/styles/",
         "dev": "webpack-dev-server --env dev --mode development",
         "repl": "pulp --psc-package repl",
-        "clean": "rm -Rf output"
+        "clean": "rm -Rf output",
+        "test": "pulp test"
     },
     "dependencies": {
         "@babel/polyfill": "^7.0.0",

packages.dhall

@@ -156,7 +156,7 @@ let additions =
           mkPackage
           [ "prelude", "effect", "arrays", "spec", "node-fs" ]
           "https://github.com/purescript-spec/purescript-spec-discovery"
-          "v3.1.0"
+          "v4.0.0"
       , spec-quickcheck =
           mkPackage
           [ "prelude", "aff", "random", "quickcheck", "spec" ]

src/Gargantext/Components/App.purs

@@ -76,7 +76,8 @@ appCpt = R.hooksComponent "G.C.App.app" cpt where
               \session ->
                 simpleLayout $
                   explorerLayout { graphId, mCurrentRoute, session
-                                 , sessions: (fst sessions), treeId: Nothing, frontends}
+                                 , sessions: (fst sessions), frontends
+                                 , showLogin}
 
 forestLayout :: Frontends -> Sessions -> AppRoute -> R2.Setter Boolean -> R.Element -> R.Element
 forestLayout frontends sessions route showLogin child =

src/Gargantext/Components/FacetsTable.purs

@@ -5,17 +5,15 @@ module Gargantext.Components.FacetsTable where
 
 import Prelude
 import Data.Argonaut (class DecodeJson, class EncodeJson, decodeJson, jsonEmptyObject, (.:), (:=), (~>))
-import Data.Array (filter, (!!))
+import Data.Array (concat, filter)
 import Data.Generic.Rep (class Generic)
 import Data.Generic.Rep.Show (genericShow)
 import Data.Maybe (Maybe(..))
 import Data.Set (Set)
 import Data.Set as Set
-import Data.Tuple (fst)
+import Data.Tuple (fst, snd)
 import Data.Tuple.Nested ((/\))
-import DOM.Simple.Console (log)
 import Effect (Effect)
-import Effect.Class (liftEffect)
 import Effect.Aff (Aff, launchAff_)
 import Reactix as R
 import Reactix.DOM.HTML as H
@@ -28,7 +26,7 @@ import Gargantext.Routes (SessionRoute(Search, NodeAPI))
 import Gargantext.Routes as Routes
 import Gargantext.Sessions (Session, sessionId, post, deleteWithBody)
 import Gargantext.Types (NodeType(..), OrderBy(..), NodePath(..))
-import Gargantext.Utils (toggleSet)
+import Gargantext.Utils (toggleSet, zeroPad)
 import Gargantext.Utils.DecodeMaybe ((.|))
 ------------------------------------------------------------------------
 
@@ -44,7 +42,8 @@ newtype SearchQuery = SearchQuery { query :: TextQuery }
 
 instance encodeJsonSearchQuery :: EncodeJson SearchQuery where
   encodeJson (SearchQuery {query})
-     = "query"     := query !! 0 -- TODO anoe
+     -- = "query"     := query !! 0 -- TODO anoe
+    = "query" := concat query
     ~> jsonEmptyObject
 
 newtype SearchResults = SearchResults { results :: Array Response }
@@ -90,8 +89,15 @@ newtype DocumentsView =
   , pairs    :: Array Pair
   , delete   :: Boolean
   , category :: Category
+  , publication_year :: Int
+  , publication_month :: Int
+  , publication_day  :: Int
   }
 
+publicationDate :: DocumentsView -> String
+publicationDate (DocumentsView {publication_year, publication_month, publication_day}) =
+  (zeroPad 2 publication_year) <> "-" <> (zeroPad 2 publication_month) <> "-" <> (zeroPad 2 publication_day)
+
 derive instance genericDocumentsView :: Generic DocumentsView _
 
 instance showDocumentsView :: Show DocumentsView where
@@ -112,6 +118,9 @@ newtype Hyperdata = Hyperdata
   { authors :: String
   , title   :: String
   , source  :: String
+  , publication_year :: Int
+  , publication_month :: Int
+  , publication_day :: Int
   }
 
 --instance decodeHyperdata :: DecodeJson Hyperdata where
@@ -134,7 +143,10 @@ instance decodeHyperdata :: DecodeJson Hyperdata where
     authors <- obj .| "authors"
     title  <- obj .| "title"
     source <- obj .| "source"
-    pure $ Hyperdata { authors, title,source }
+    publication_year <- obj .: "publication_year"
+    publication_month <- obj .: "publication_month"
+    publication_day <- obj .: "publication_day"
+    pure $ Hyperdata { authors, title, source, publication_year, publication_month, publication_day }
 
 {-
 instance decodeResponse :: DecodeJson Response where
@@ -170,6 +182,14 @@ docViewCpt = R.hooksComponent "G.C.FacetsTable.DocView" cpt
     cpt {frontends, session, nodeId, listId, query, totalRecords, chart, container} _ = do
       deletions <- R.useState' initialDeletions
       path <- R.useState' $ initialPagePath {nodeId, listId, query, session}
+
+      R.useEffect' $ do
+        let ipp = initialPagePath {nodeId, listId, query, session}
+        if fst path == ipp then
+          pure unit
+        else
+          snd path $ const ipp
+
       pure $ H.div { className: "container1" }
         [ H.div { className: "row" }
           [ chart
@@ -237,15 +257,26 @@ initialPagePath {session, nodeId, listId, query} = {session, nodeId, listId, que
 
 loadPage :: PagePath -> Aff (Array DocumentsView)
 loadPage {session, nodeId, listId, query, params: {limit, offset, orderBy}} = do
-  liftEffect $ log "loading documents page: loadPage with Offset and limit"
   let p = Search { listId, offset, limit, orderBy: convOrderBy <$> orderBy } (Just nodeId)
   SearchResults res <- post session p $ SearchQuery {query}
   pure $ res2corpus <$> res.results
   where
     res2corpus :: Response -> DocumentsView
     res2corpus (Response { id, created: date, ngramCount: score, category
-                         , hyperdata: Hyperdata {authors, title, source} }) =
-      DocumentsView { id, date, title, source, score, authors, category, pairs: [], delete: false }
+                         , hyperdata: Hyperdata {authors, title, source, publication_year, publication_month, publication_day} }) =
+      DocumentsView { id
+                    , date
+                    , title
+                    , source
+                    , score
+                    , authors
+                    , category
+                    , pairs: []
+                    , delete: false
+                    , publication_year
+                    , publication_month
+                    , publication_day
+                    }
     convOrderBy (T.ASC  (T.ColumnName "Date")) = DateAsc
     convOrderBy (T.DESC (T.ColumnName "Date")) = DateDesc
     convOrderBy (T.ASC  (T.ColumnName "Title")) = TitleAsc
@@ -280,10 +311,10 @@ page :: Record PageProps -> R.Element
 page props = R.createElement pageCpt props []
 
 pageCpt :: R.Component PageProps
-pageCpt = R.staticComponent "G.C.FacetsTable.Page" cpt
+pageCpt = R.hooksComponent "G.C.FacetsTable.Page" cpt
   where
     cpt {frontends, totalRecords, container, deletions, documents, session, path: path@({nodeId, listId, query} /\ setPath)} _ = do
-      T.table { rows, container, colNames, totalRecords, params, wrapColElts}
+      pure $ T.table { rows, container, colNames, totalRecords, params, wrapColElts }
       where
         setParams f = setPath $ \p@{params: ps} -> p {params = f ps}
         params = (fst path).params /\ setParams
@@ -302,11 +333,11 @@ pageCpt = R.staticComponent "G.C.FacetsTable.Page" cpt
             url frontends $ Routes.CorpusDocument (sessionId session) nodeId listId id
         comma = H.span {} [ H.text ", " ]
         rows = row <$> filter (not <<< isDeleted) documents
-        row dv@(DocumentsView {id,score,title,source,date, authors,pairs,delete,category}) =
+        row dv@(DocumentsView {id, score, title, source, authors, pairs, delete, category}) =
           { row:
             [ H.div {} [ H.a { className: gi category, on: {click: markClick} } [] ]
               -- TODO show date: Year-Month-Day only
-            , maybeStricken delete [ H.text date ]
+            , maybeStricken delete [ H.text $ publicationDate dv ]
             , maybeStricken delete [ H.a {target: "_blank", href: documentUrl id} [ H.text title ] ]
             , maybeStricken delete [ H.text source ]
             , maybeStricken delete [ H.text authors ]

src/Gargantext/Components/Forest.purs

 module Gargantext.Components.Forest where
 
-import Prelude (const, ($), (<$>))
+import Prelude (const, pure, ($), (<$>))
 import Data.Array as A
 import Data.Maybe (Maybe(..))
+import Data.Tuple.Nested((/\))
 import Reactix as R
 import Reactix.DOM.HTML as H
 import Gargantext.Ends (Frontends)
@@ -12,9 +13,9 @@ import Gargantext.Components.Forest.Tree (treeView)
 import Gargantext.Utils.Reactix as R2
 
 type Props =
-  ( sessions  :: Sessions
+  ( frontends :: Frontends
   , route     :: AppRoute
-  , frontends :: Frontends
+  , sessions  :: Sessions
   , showLogin :: R2.Setter Boolean
   )
 
@@ -22,9 +23,10 @@ forest :: Record Props -> R.Element
 forest props = R.createElement forestCpt props []
 
 forestCpt :: R.Component Props
-forestCpt = R.staticComponent "G.C.Forest.forest" cpt where
-  cpt {sessions, route, frontends, showLogin} _ =
-    R.fragment $ A.cons (plus showLogin) trees
+forestCpt = R.hooksComponent "G.C.Forest.forest" cpt where
+  cpt {frontends, route, sessions, showLogin} _ = R2.useCache (frontends /\ route /\ sessions) (cpt' showLogin)
+  cpt' showLogin (frontends /\ route /\ sessions) =
+    pure $ R.fragment $ A.cons (plus showLogin) trees
     where
       trees = tree <$> unSessions sessions
       tree s@(Session {treeId}) =

src/Gargantext/Components/Forest/Tree/Node.purs

 module Gargantext.Components.Forest.Tree.Node where
 
-import Prelude
+import Prelude (class Eq, class Show, show, (&&), (<>), (==))
 import Data.Array (foldl)
 import Gargantext.Types
-import Effect.Uncurried (mkEffectFn1)
--- import Data.Set
-import Data.Array (filter)
-import Reactix.DOM.HTML as H
-import Effect.Aff (Aff, launchAff, runAff)
 
 ------------------------------------------------------------------------
 ------------------------------------------------------------------------

src/Gargantext/Components/Graph.purs

@@ -4,31 +4,28 @@ module Gargantext.Components.Graph
   -- , forceAtlas2Settings, ForceAtlas2Settings, ForceAtlas2OptionalSettings
   -- )
   where
-import Prelude (bind, discard, pure, ($), unit, map)
+import Prelude (bind, const, discard, pure, ($), unit)
 import Data.Either (Either(..))
-import Data.Map as Map
 import Data.Maybe (Maybe(..))
-import Data.Nullable (notNull, null, Nullable)
-import Data.Set as Set
-import Data.Tuple (fst, snd, Tuple(..))
+import Data.Nullable (Nullable)
+import Data.Tuple (fst)
 import Data.Tuple.Nested ((/\))
-import DOM.Simple (createElement, setAttr)
 import DOM.Simple.Console (log, log2)
 import DOM.Simple.Types (Element)
-import Effect.Timer (setTimeout)
-import FFI.Simple (delay, (..))
+import FFI.Simple (delay)
 import Reactix as R
 import Reactix.DOM.HTML as RH
 
 import Gargantext.Hooks.Sigmax as Sigmax
 import Gargantext.Hooks.Sigmax.Types as SigmaxTypes
 import Gargantext.Hooks.Sigmax.Sigma as Sigma
-import Gargantext.Utils.Reactix as R2
 
 type OnProps  = ()
 
 type Graph = SigmaxTypes.Graph SigmaxTypes.Node SigmaxTypes.Edge
 
+data Stage = Init | Ready | Cleanup
+
 type Props sigma forceatlas2 =
   ( elRef :: R.Ref (Nullable Element)
   , forceAtlas2Settings :: forceatlas2
@@ -36,6 +33,7 @@ type Props sigma forceatlas2 =
   , selectedNodeIds :: R.State SigmaxTypes.SelectedNodeIds
   , sigmaSettings :: sigma
   , sigmaRef :: R.Ref Sigmax.Sigma
+  , stage :: R.State Stage
   )
 
 graph :: forall s fa2. Record (Props s fa2) -> R.Element
@@ -45,14 +43,18 @@ graphCpt :: forall s fa2. R.Component (Props s fa2)
 graphCpt = R.hooksComponent "Graph" cpt
   where
     cpt props _ = do
-      let nodesMap = SigmaxTypes.nodesMap props.graph
-      let selectedNodeIds = props.selectedNodeIds
+      stageHooks props
 
-      R.useEffect' $ do
-        Sigmax.dependOnSigma (R.readRef props.sigmaRef) "[graphCpt] no sigma" $ \sigma ->
-          Sigmax.markSelectedNodes sigma (fst selectedNodeIds) nodesMap
+      -- NOTE: This div is not empty after sigma initializes.
+      -- When we change state, we make it empty though.
+      --pure $ RH.div { ref: props.elRef, style: {height: "95%"} } []
+      pure $ case R.readNullableRef props.elRef of
+        Nothing -> RH.div {} []
+        Just el -> R.createPortal [] el
 
+    stageHooks props@{stage: (Init /\ setStage)} = do
       R.useEffectOnce $ do
+        log "[graphCpt] effect once"
         let rSigma = R.readRef props.sigmaRef
 
         case Sigmax.readSigma rSigma of
@@ -76,20 +78,26 @@ graphCpt = R.hooksComponent "Graph" cpt
                 Sigma.startForceAtlas2 sig props.forceAtlas2Settings
 
                 -- bind the click event only initially, when ref was empty
-                Sigmax.bindSelectedNodesClick props.sigmaRef selectedNodeIds
+                Sigmax.bindSelectedNodesClick props.sigmaRef props.selectedNodeIds
           Just sig -> do
             pure unit
 
+        setStage $ const $ Ready
+
         delay unit $ \_ -> do
-          log "[GraphCpt] cleanup"
+          log "[graphCpt] cleanup"
           pure $ pure unit
 
-      -- NOTE: This div is not empty after sigma initializes.
-      -- When we change state, we make it empty though.
-      --pure $ RH.div { ref: props.elRef, style: {height: "95%"} } []
-      pure $ case R.readNullableRef props.elRef of
-        Nothing -> RH.div {} []
-        Just el -> R.createPortal [] el
+    stageHooks props@{stage: (Ready /\ setStage)} = do
+      let nodesMap = SigmaxTypes.nodesMap props.graph
+
+      -- TODO Probably this can be optimized to re-mark selected nodes only when they changed
+      R.useEffect' $ do
+        Sigmax.dependOnSigma (R.readRef props.sigmaRef) "[graphCpt] no sigma" $ \sigma ->
+          Sigmax.markSelectedNodes sigma (fst props.selectedNodeIds) nodesMap
+
+    stageHooks _ = pure unit
+
 
 type SigmaSettings =
   ( animationsTime :: Number

src/Gargantext/Components/GraphExplorer.purs

@@ -11,6 +11,7 @@ import Data.Sequence as Seq
 import Data.Set as Set
 import Data.Tuple (fst, snd, Tuple(..))
 import Data.Tuple.Nested ((/\))
+import DOM.Simple.Console (log2)
 import DOM.Simple.Types (Element)
 import Effect.Aff (Aff)
 import Reactix as R
@@ -18,6 +19,7 @@ import Reactix.DOM.HTML as RH
 
 import Gargantext.Hooks.Loader (useLoader)
 import Gargantext.Hooks.Sigmax (Sigma)
+import Gargantext.Hooks.Sigmax as Sigmax
 import Gargantext.Hooks.Sigmax.Types as SigmaxTypes
 import Gargantext.Components.GraphExplorer.Controls as Controls
 import Gargantext.Components.GraphExplorer.Sidebar as Sidebar
@@ -29,6 +31,7 @@ import Gargantext.Ends (Frontends)
 import Gargantext.Routes (SessionRoute(NodeAPI), AppRoute)
 import Gargantext.Sessions (Session, Sessions, get)
 import Gargantext.Types (NodeType(Graph))
+import Gargantext.Utils.Reactix as R2
 
 type GraphId = Int
 
@@ -38,7 +41,7 @@ type LayoutProps =
   , mCurrentRoute :: AppRoute
   , session :: Session
   , sessions :: Sessions
-  , treeId :: Maybe Int
+  , showLogin :: R.State Boolean
   )
 
 type Props = (
@@ -54,11 +57,12 @@ explorerLayout props = R.createElement explorerLayoutCpt props []
 explorerLayoutCpt :: R.Component LayoutProps
 explorerLayoutCpt = R.hooksComponent "G.C.GraphExplorer.explorerLayout" cpt
   where
-    cpt {graphId, mCurrentRoute, treeId, session, sessions, frontends} _ = do
+    cpt {graphId, mCurrentRoute, session, sessions, frontends, showLogin} _ = do
       useLoader graphId (getNodes session) handler
       where
         handler loaded =
-          explorer {graphId, mCurrentRoute, mMetaData, treeId, session, sessions, graph: Just graph, frontends}
+          explorer { graphId, mCurrentRoute, mMetaData
+                   , session, sessions, graph: Just graph, frontends, showLogin}
           where (Tuple mMetaData graph) = convert loaded
 
 --------------------------------------------------------------
@@ -68,13 +72,23 @@ explorer props = R.createElement explorerCpt props []
 explorerCpt :: R.Component Props
 explorerCpt = R.hooksComponent "G.C.GraphExplorer.explorer" cpt
   where
-    cpt {frontends, graph, graphId, mCurrentRoute, mMetaData, session, sessions, treeId} _ = do
+    cpt {frontends, graph, graphId, mCurrentRoute, mMetaData, session, sessions, showLogin} _ = do
+      dataRef <- R.useRef graph
       graphRef <- R.useRef null
       controls <- Controls.useGraphControls
-      state <- useExplorerState
-      showLogin <- snd <$> R.useState' true
       selectedNodeIds <- R.useState' $ Set.empty
 
+      R.useEffect' $ do
+        case Tuple (R.readRef dataRef) graph of
+          Tuple Nothing Nothing -> pure unit
+          Tuple (Just g1) (Just g2) | SigmaxTypes.eqGraph g1 g2 -> pure unit
+          _ -> do
+            let rSigma = R.readRef controls.sigmaRef
+            Sigmax.cleanupSigma rSigma "explorerCpt"
+            R.setRef dataRef graph
+            snd selectedNodeIds $ const Set.empty
+            snd controls.graphStage $ const Graph.Init
+
       R.useEffect' $ do
         if fst controls.showSidePanel == GET.InitialClosed && (not Set.isEmpty $ fst selectedNodeIds) then
           snd controls.showSidePanel $ \_ -> GET.Opened
@@ -93,9 +107,9 @@ explorerCpt = R.hooksComponent "G.C.GraphExplorer.explorer" cpt
                   , col [ pullRight [ Toggle.sidebarToggleButton controls.showSidePanel ] ]
                   ]
                 , row [ Controls.controls controls ]
-                , row [ tree {mCurrentRoute, treeId} controls showLogin
-                      , RH.div { ref: graphRef, id: "graph-view", className: "col-md-12", style: {height: "95%"} } []  -- graph container
-                      , mGraph graphRef controls.sigmaRef {graphId, graph, selectedNodeIds}
+                , row [ tree (fst controls.showTree) {sessions, mCurrentRoute, frontends} (snd showLogin)
+                      , RH.div { ref: graphRef, id: "graph-view", className: graphClassName controls, style: {height: "95%"} } []  -- graph container
+                      , mGraph graphRef controls.sigmaRef {graphId, graph, graphStage: controls.graphStage, selectedNodeIds}
                       , mSidebar graph mMetaData {frontends, session, selectedNodeIds, showSidePanel: fst controls.showSidePanel}
                       ]
                 , row [
@@ -104,12 +118,12 @@ explorerCpt = R.hooksComponent "G.C.GraphExplorer.explorer" cpt
               ]
             ]
           ]
-      where
-        -- tree {treeId: Nothing} _ _ = RH.div { id: "tree" } []
-        tree _ {showTree: false /\ _} _ = RH.div { id: "tree" } []
-        tree {mCurrentRoute: route, treeId: root} _ showLogin =
-          RH.div {className: "col-md-2", style: {paddingTop: "60px"}}
-          [forest {sessions, route, frontends, showLogin}]
+
+    graphClassName :: Record Controls.Controls -> String
+    graphClassName {showSidePanel: (GET.Opened /\ _), showTree: (true /\ _)} = "col-md-8"
+    graphClassName {showTree: (true /\ _)} = "col-md-10"
+    graphClassName {showSidePanel: (GET.Opened /\ _)} = "col-md-10"
+    graphClassName _ = "col-md-12"
 
     outer = RH.div { className: "col-md-12" }
     inner = RH.div { className: "container-fluid", style: { paddingTop: "90px" } }
@@ -119,14 +133,24 @@ explorerCpt = R.hooksComponent "G.C.GraphExplorer.explorer" cpt
     pullLeft  = RH.div { className: "pull-left" }
     pullRight = RH.div { className: "pull-right" }
 
+    tree :: Boolean
+         -> {sessions :: Sessions, mCurrentRoute :: AppRoute, frontends :: Frontends}
+         -> R2.Setter Boolean
+         -> R.Element
+    tree false _ _ = RH.div { id: "tree" } []
+    tree true {sessions, mCurrentRoute: route, frontends} showLogin =
+      RH.div {className: "col-md-2", style: {paddingTop: "60px"}}
+      [forest {sessions, route, frontends, showLogin}]
+
     mGraph :: R.Ref (Nullable Element)
            -> R.Ref Sigma
            -> { graphId :: GraphId
               , graph :: Maybe Graph.Graph
+              , graphStage :: R.State Graph.Stage
               , selectedNodeIds :: R.State SigmaxTypes.SelectedNodeIds}
            -> R.Element
     mGraph _ _ {graph: Nothing} = RH.div {} []
-    mGraph graphRef sigmaRef {graphId, graph: Just graph, selectedNodeIds} = graphView graphRef sigmaRef {graphId, graph, selectedNodeIds}
+    mGraph graphRef sigmaRef r@{graph: Just graph} = graphView graphRef sigmaRef $ r { graph = graph }
 
     mSidebar :: Maybe Graph.Graph
              -> Maybe GET.MetaData
@@ -146,27 +170,10 @@ explorerCpt = R.hooksComponent "G.C.GraphExplorer.explorer" cpt
                       , showSidePanel
                       }
 
-useExplorerState :: R.Hooks (Record GET.State)
-useExplorerState = do pure {}
-{-   corpusId <- R.useState' 0
-  cursorSize <- R.useState' 0.0
-  filePath <- R.useState' ""
-  graphData <- R.useState' initialGraphData
-  legendData <- R.useState' []
-  multiNodeSelection <- R.useState' false
-  selectedNodes <- R.useState' Set.empty
-  showControls <- R.useState' false
-  showSidePanel <- R.useState' false
-  showTree <- R.useState' false
-  sigmaGraphData <- R.useState' (Nothing :: Maybe Graph.Graph)
-  sigmaSettings <- R.useState' Graph.sigmaSettings
-  treeId <- R.useState' (Nothing :: Maybe TreeId) -}
-
-  --treeId : Nothing
-
 type GraphProps = (
     graphId :: GraphId
   , graph :: Graph.Graph
+  , graphStage :: R.State Graph.Stage
   , selectedNodeIds :: R.State SigmaxTypes.SelectedNodeIds
 )
 
@@ -184,6 +191,7 @@ graphView elRef sigmaRef props = R.createElement el props []
         , selectedNodeIds
         , sigmaSettings: Graph.sigmaSettings
         , sigmaRef: sigmaRef
+        , stage: props.graphStage
         }
 
 convert :: GET.GraphData -> Tuple (Maybe GET.MetaData) Graph.Graph

src/Gargantext/Components/GraphExplorer/Button.purs

@@ -5,8 +5,6 @@ module Gargantext.Components.GraphExplorer.Button
   ) where
 
 import Prelude
-import Data.Maybe (Maybe(..))
-import DOM.Simple.Console (log2)
 import Effect (Effect)
 import Reactix as R
 import Reactix.DOM.HTML as H

src/Gargantext/Components/GraphExplorer/Controls.purs

@@ -11,10 +11,10 @@ module Gargantext.Components.GraphExplorer.Controls
  ) where
 
 import Data.Maybe (Maybe(..))
-import DOM.Simple.Console (log, log2)
+import Data.Tuple (fst)
 import Data.Tuple.Nested ((/\), get1)
 import Effect (Effect)
-import Effect.Timer (clearTimeout, setTimeout)
+import Effect.Timer (setTimeout)
 import Prelude
 import Reactix as R
 import Reactix.DOM.HTML as RH
@@ -26,12 +26,12 @@ import Gargantext.Components.GraphExplorer.SlideButton (cursorSizeButton, labelS
 import Gargantext.Components.GraphExplorer.ToggleButton (edgesToggleButton, pauseForceAtlasButton)
 import Gargantext.Components.GraphExplorer.Types as GET
 import Gargantext.Hooks.Sigmax as Sigmax
-import Gargantext.Hooks.Sigmax.Sigma as Sigma
 import Gargantext.Utils.Range as Range
 import Gargantext.Utils.Reactix as R2
 
 type Controls =
   ( cursorSize      :: R.State Number
+  , graphStage      :: R.State Graph.Stage
   , multiNodeSelect :: R.Ref Boolean
   , showControls    :: R.State Boolean
   , showSidePanel   :: R.State GET.SidePanelState
@@ -76,15 +76,18 @@ controlsCpt = R.hooksComponent "GraphControls" cpt
       localControls <- initialLocalControls
       -- ref to track automatic FA pausing
       -- If user pauses FA before auto is triggered, clear the timeoutId
-      -- TODO: mFAPauseRef needs to be set higher up the tree
       mFAPauseRef <- R.useRef Nothing
 
-      --R.useEffect $ handleForceAtlasPause props.sigmaRef localControls.pauseForceAtlas mFAPauseRef
+      -- when graph is changed, cleanup the mFAPauseRef
+      R.useEffect' $ do
+        case fst props.graphStage of
+          Graph.Init -> R.setRef mFAPauseRef Nothing
+          _          -> pure unit
+
       R.useEffect' $ Sigmax.handleForceAtlas2Pause props.sigmaRef localControls.pauseForceAtlas (get1 localControls.showEdges) mFAPauseRef
 
       R.useEffectOnce' $ do
         timeoutId <- setTimeout 2000 $ do
-          --R.setRef mFAPauseRef Nothing
           let (toggled /\ setToggled) = localControls.pauseForceAtlas
           if toggled then
             setToggled $ const false
@@ -122,6 +125,7 @@ controlsCpt = R.hooksComponent "GraphControls" cpt
 useGraphControls :: R.Hooks (Record Controls)
 useGraphControls = do
   cursorSize      <- R.useState' 10.0
+  graphStage      <- R.useState' Graph.Init
   multiNodeSelect <- R.useRef false
   showControls    <- R.useState' false
   showSidePanel   <- R.useState' GET.InitialClosed
@@ -130,6 +134,7 @@ useGraphControls = do
   sigmaRef <- R.useRef sigma
 
   pure { cursorSize
+       , graphStage
        , multiNodeSelect
        , showControls
        , showSidePanel

src/Gargantext/Components/GraphExplorer/RangeControl.purs

@@ -6,7 +6,6 @@ module Gargantext.Components.GraphExplorer.RangeControl
   ) where
 
 import Prelude
-import Data.Maybe (Maybe(..))
 import Data.Tuple.Nested ((/\))
 import Reactix as R
 import Reactix.DOM.HTML as H

src/Gargantext/Components/GraphExplorer/SlideButton.purs

@@ -7,7 +7,6 @@ module Gargantext.Components.GraphExplorer.SlideButton
 
 import Global (readFloat)
 import Prelude
-import Data.Maybe (Maybe(..))
 import Data.Tuple (snd)
 import Data.Tuple.Nested ((/\))
 import Effect (Effect)

src/Gargantext/Components/GraphExplorer/ToggleButton.purs

@@ -9,7 +9,6 @@ module Gargantext.Components.GraphExplorer.ToggleButton
 
 import Prelude
 
-import Data.Maybe (Maybe(..))
 import Data.Tuple (snd)
 import Data.Tuple.Nested ((/\))
 import Effect (Effect)
@@ -18,7 +17,6 @@ import Reactix.DOM.HTML as H
 
 import Gargantext.Components.GraphExplorer.Types as GET
 import Gargantext.Hooks.Sigmax as Sigmax
-import Gargantext.Hooks.Sigmax.Sigma as Sigma
 
 type Props = (
     state :: R.State Boolean

src/Gargantext/Components/GraphExplorer/Types.purs

@@ -6,7 +6,6 @@ import Data.Array ((!!), length)
 import Data.Maybe (Maybe(..), fromJust)
 import Data.Newtype (class Newtype)
 import Partial.Unsafe (unsafePartial)
-import Reactix as R
 
 newtype Node = Node
   { id_ :: String

src/Gargantext/Components/Loader.purs

 module Gargantext.Components.Loader where
 
 import Prelude
-import Data.Maybe (Maybe(..), isNothing, maybe, maybe')
+import Data.Maybe (Maybe(..), maybe')
 import Data.Tuple.Nested ((/\))
 import Effect.Aff (Aff)
 import Effect.Class (liftEffect)

src/Gargantext/Components/Login/Types.purs

@@ -2,7 +2,7 @@ module Gargantext.Components.Login.Types where
 
 import Prelude
 import Data.Argonaut ( class DecodeJson, class EncodeJson, decodeJson, jsonEmptyObject
-                      , (.:), (.??), (:=), (~>)
+                      , (.:), (.:!), (:=), (~>)
                       )
 import Data.Generic.Rep (class Generic)
 import Data.Generic.Rep.Eq (genericEq)
@@ -52,8 +52,8 @@ instance decodeAuthInvalid :: DecodeJson AuthInvalid where
 instance decodeAuthResponse :: DecodeJson AuthResponse where
   decodeJson json = do
     obj   <- decodeJson json
-    valid <- obj .?? "valid"
-    inval <- obj .?? "inval"
+    valid <- obj .:! "valid"
+    inval <- obj .:! "inval"
     pure $ AuthResponse {valid, inval}
 
 instance decodeAuthData :: DecodeJson AuthData where

src/Gargantext/Components/NgramsTable.purs

@@ -19,7 +19,7 @@ import Data.Lens.Record (prop)
 import Data.List as List
 import Data.Map (Map)
 import Data.Map as Map
-import Data.Maybe (Maybe(..), maybe, fromJust)
+import Data.Maybe (Maybe(..), maybe)
 import Data.Monoid.Additive (Additive(..))
 import Data.Ord.Down (Down(..))
 import Data.Set (Set)

src/Gargantext/Components/NgramsTable/Core.purs

@@ -50,14 +50,14 @@ import Control.Monad.Cont.Trans (lift)
 import Data.Array (head)
 import Data.Array as A
 import Data.Argonaut ( class DecodeJson, decodeJson, class EncodeJson, encodeJson
-                     , jsonEmptyObject, (:=), (~>), (.:), (.??) )
+                     , jsonEmptyObject, (:=), (~>), (.:), (.:!) )
 import Data.Bifunctor (lmap)
 import Data.Either (Either(..))
 import Data.Foldable (class Foldable, foldMap, foldl, foldr)
 import Data.FoldableWithIndex (class FoldableWithIndex, foldMapWithIndex, foldlWithIndex, foldrWithIndex)
 import Data.FunctorWithIndex (class FunctorWithIndex, mapWithIndex)
 import Data.Newtype (class Newtype)
-import Data.Lens (Iso', Lens', use, view, (%=), (.~), (?=), (^.), (^?))
+import Data.Lens (Iso', Lens', use, view, (%=), (.~), (?=), (^?))
 import Data.Lens.Common (_Just)
 import Data.Lens.At (class At, at)
 import Data.Lens.Index (class Index, ix)
@@ -184,8 +184,8 @@ instance decodeJsonNgramsElement :: DecodeJson NgramsElement where
     ngrams      <- obj .:  "ngrams"
     list        <- obj .:  "list"
     occurrences <- obj .:  "occurrences"
-    parent      <- obj .?? "parent"
-    root        <- obj .?? "root"
+    parent      <- obj .:! "parent"
+    root        <- obj .:! "root"
     children'   <- obj .:  "children"
     let children = Set.fromFoldable (children' :: Array NgramsTerm)
     pure $ NgramsElement {ngrams, list, occurrences, parent, root, children}
@@ -354,8 +354,8 @@ instance encodeJsonReplace :: EncodeJson a => EncodeJson (Replace a) where
 instance decodeJsonReplace :: (DecodeJson a, Eq a) => DecodeJson (Replace a) where
   decodeJson json = do
     obj  <- decodeJson json
-    mold <- obj .?? "old"
-    mnew <- obj .?? "new"
+    mold <- obj .:! "old"
+    mnew <- obj .:! "new"
     case Tuple mold mnew of
       Tuple (Just old) (Just new) -> pure $ replace old new
       Tuple Nothing Nothing       -> pure Keep

src/Gargantext/Components/Nodes/Annuaire.purs

@@ -15,7 +15,7 @@ import Gargantext.Ends (url, Frontends)
 import Gargantext.Routes (SessionRoute(..))
 import Gargantext.Routes as Routes
 import Gargantext.Sessions (Session, sessionId, get)
-import Gargantext.Types (NodePath(..), NodeType(..))
+import Gargantext.Types (NodeType(..))
 import Gargantext.Hooks.Loader (useLoader)
 
 newtype IndividuView =

src/Gargantext/Components/Nodes/Annuaire/User/Contacts.purs

@@ -4,14 +4,13 @@ module Gargantext.Components.Nodes.Annuaire.User.Contacts
   , userLayout )
   where
 
-import Prelude (bind, pure, ($), (<<<), (<>), (<$>), show, discard)
+import Prelude (bind, pure, ($), (<<<), (<>), (<$>), show)
 import Data.Array (head)
 import Data.Maybe (Maybe(..), fromMaybe, maybe)
 import Data.Tuple (Tuple(..))
 import Data.Tuple.Nested ((/\))
 import Data.Newtype (unwrap)
 import Data.String (joinWith)
-import DOM.Simple.Console (log2)
 import Effect.Aff (Aff)
 import Reactix as R
 import Reactix.DOM.HTML as H
@@ -21,7 +20,7 @@ import Gargantext.Components.Nodes.Annuaire.User.Contacts.Types
   , ContactWho(..), HyperData(..), HyperdataContact(..) )
 import Gargantext.Components.Nodes.Annuaire.User.Contacts.Tabs as Tabs
 import Gargantext.Hooks.Loader (useLoader)
-import Gargantext.Routes
+import Gargantext.Routes as Routes
 import Gargantext.Ends (Frontends)
 import Gargantext.Sessions (Session, get)
 import Gargantext.Types (NodeType(..))
@@ -144,7 +143,7 @@ userLayoutCpt = R.staticComponent "G.C.Nodes.Annuaire.User.Contacts.userLayout"
 -- | toUrl to get data
 getContact :: Session -> Int -> Aff ContactData
 getContact session id = do
-  contactNode <- get session $ NodeAPI NodeContact (Just id) ""
+  contactNode <- get session $ Routes.NodeAPI NodeContact (Just id) ""
   -- TODO: we need a default list for the pairings
   --defaultListIds <- get $ toUrl endConfigStateful Back (Children NodeList 0 1 Nothing) $ Just id
   --case (head defaultListIds :: Maybe (NodePoly HyperdataList)) of
@@ -175,7 +174,7 @@ annuaireUserLayoutCpt = R.hooksComponent "G.C.Nodes.Annuaire.User.Contacts.annua
 
 getAnnuaireContact :: Session -> Int -> Int -> Aff ContactData
 getAnnuaireContact session annuaireId id = do
-  contactNode <- get session $ NodeAPI Annuaire (Just annuaireId) $ "contact/" <> (show id)
+  contactNode <- get session $ Routes.NodeAPI Annuaire (Just annuaireId) $ "contact/" <> (show id)
   -- TODO: we need a default list for the pairings
   --defaultListIds <- get $ toUrl endConfigStateful Back (Children NodeList 0 1 Nothing) $ Just id
   --case (head defaultListIds :: Maybe (NodePoly HyperdataList)) of

src/Gargantext/Components/Nodes/Annuaire/User/Contacts/Tabs.purs

@@ -13,7 +13,6 @@ import Gargantext.Components.NgramsTable as NT
 import Gargantext.Components.Tab as Tab
 import Gargantext.Components.Nodes.Annuaire.User.Contacts.Types (ContactData)
 import Gargantext.Ends (Frontends)
-import Gargantext.Routes (AppRoute)
 import Gargantext.Sessions (Session)
 import Gargantext.Types (TabType(..), TabSubType(..), CTabNgramType(..), PTabNgramType(..))
 

src/Gargantext/Components/Nodes/Annuaire/User/Contacts/Types.purs

@@ -2,7 +2,7 @@ module Gargantext.Components.Nodes.Annuaire.User.Contacts.Types where
 
 import Prelude
 
-import Data.Argonaut (class DecodeJson, decodeJson, (.:), (.??))
+import Data.Argonaut (class DecodeJson, decodeJson, (.:), (.:!))
 import Data.Maybe (Maybe, fromMaybe)
 import Data.Map (Map)
 import Gargantext.Utils.DecodeMaybe ((.?|))
@@ -36,11 +36,11 @@ instance decodeContactWho :: DecodeJson ContactWho
   where
     decodeJson json = do
       obj <- decodeJson json
-      idWho  <- obj .?? "id"
-      firstName <- obj .?? "firstName"
-      lastName  <- obj .?? "lastName"
-      keywords  <- obj .?? "keywords"
-      freetags  <- obj .?? "freetags"
+      idWho  <- obj .:! "id"
+      firstName <- obj .:! "firstName"
+      lastName  <- obj .:! "lastName"
+      keywords  <- obj .:! "keywords"
+      freetags  <- obj .:! "freetags"
 
       let k = fromMaybe [] keywords
       let f = fromMaybe [] freetags
@@ -69,15 +69,15 @@ instance decodeContactWhere :: DecodeJson ContactWhere
   where
     decodeJson json = do
       obj <- decodeJson json
-      organization  <- obj .?? "organization"
-      labTeamDepts  <- obj .?? "labTeamDepts"
-      role          <- obj .?? "role"
-      office        <- obj .?? "office"
-      country       <- obj .?? "country"
-      city          <- obj .?? "city"
-      touch         <- obj .?? "touch"
-      entry         <- obj .?? "entry"
-      exit          <- obj .?? "exit"
+      organization  <- obj .:! "organization"
+      labTeamDepts  <- obj .:! "labTeamDepts"
+      role          <- obj .:! "role"
+      office        <- obj .:! "office"
+      country       <- obj .:! "country"
+      city          <- obj .:! "city"
+      touch         <- obj .:! "touch"
+      entry         <- obj .:! "entry"
+      exit          <- obj .:! "exit"
 
       let o = fromMaybe [] organization
       let l = fromMaybe [] labTeamDepts
@@ -96,9 +96,9 @@ instance decodeContactTouch :: DecodeJson ContactTouch
   where
     decodeJson json = do
       obj <- decodeJson json
-      mail  <- obj .?? "mail"
-      phone <- obj .?? "phone"
-      url   <- obj .?? "url"
+      mail  <- obj .:! "mail"
+      phone <- obj .:! "phone"
+      url   <- obj .:! "url"
       pure $ ContactTouch {mail, phone, url}
 
 
@@ -118,14 +118,14 @@ instance decodeHyperdataContact :: DecodeJson HyperdataContact
   where
     decodeJson json = do
       obj <- decodeJson json
-      bdd            <- obj .?? "bdd"
-      who            <- obj .?? "who"
-      ou             <- obj .?? "where"
-      title          <- obj .?? "title"
-      source         <- obj .?? "source"
-      lastValidation <- obj .?? "lastValidation"
-      uniqId         <- obj .?? "uniqId"
-      uniqIdBdd      <- obj .?? "uniqIdBdd"
+      bdd            <- obj .:! "bdd"
+      who            <- obj .:! "who"
+      ou             <- obj .:! "where"
+      title          <- obj .:! "title"
+      source         <- obj .:! "source"
+      lastValidation <- obj .:! "lastValidation"
+      uniqId         <- obj .:! "uniqId"
+      uniqIdBdd      <- obj .:! "uniqIdBdd"
       
       let ou' = fromMaybe [] ou
 
@@ -152,9 +152,9 @@ instance decodeUser :: DecodeJson Contact where
     obj <- decodeJson json
     id <- obj .: "id"
     typename <- obj .?| "typename"
-    userId <- obj .?? "userId"
+    userId <- obj .:! "userId"
     parentId <- obj .?| "parentId"
-    name <- obj .?? "name"
+    name <- obj .:! "name"
     date <- obj .?| "date"
     hyperdata <- obj .: "hyperdata"
     pure $ Contact { id, typename, userId

src/Gargantext/Components/Nodes/Corpus/Chart/Histo.purs

@@ -11,7 +11,6 @@ import Gargantext.Components.Charts.Options.Series (seriesBarD1)
 import Gargantext.Components.Charts.Options.Color (grey)
 import Gargantext.Components.Charts.Options.Font (itemStyle, mkTooltip, templateFormatter)
 import Gargantext.Components.Charts.Options.Data (dataSerie)
-import Gargantext.Ends (url)
 import Gargantext.Hooks.Loader (useLoader)
 import Gargantext.Components.Nodes.Corpus.Chart.Utils as U
 import Gargantext.Routes (SessionRoute(..))

src/Gargantext/Components/Nodes/Corpus/Chart/Metrics.purs

@@ -15,7 +15,6 @@ import Gargantext.Components.Charts.Options.Series (Series, seriesScatterD2)
 import Gargantext.Components.Charts.Options.Color (green, grey, red)
 import Gargantext.Components.Charts.Options.Font (itemStyle, mkTooltip, templateFormatter)
 import Gargantext.Components.Charts.Options.Data (dataSerie)
-import Gargantext.Ends (url)
 import Gargantext.Hooks.Loader (useLoader)
 import Gargantext.Components.Nodes.Corpus.Chart.Utils as U
 import Gargantext.Routes (SessionRoute(..))

src/Gargantext/Components/Nodes/Corpus/Chart/Pie.purs

@@ -15,7 +15,6 @@ import Gargantext.Components.Charts.Options.Series (seriesBarD1, seriesPieD1)
 import Gargantext.Components.Charts.Options.Color (blue)
 import Gargantext.Components.Charts.Options.Font (itemStyle, mkTooltip, templateFormatter)
 import Gargantext.Components.Charts.Options.Data (dataSerie)
-import Gargantext.Ends (url)
 import Gargantext.Hooks.Loader (useLoader)
 import Gargantext.Components.Nodes.Corpus.Chart.Utils as U
 import Gargantext.Routes (SessionRoute(..))

src/Gargantext/Components/Nodes/Corpus/Chart/Tree.purs

@@ -10,7 +10,6 @@ import Reactix.DOM.HTML as H
 import Gargantext.Components.Charts.Options.ECharts (Options(..), chart, xAxis', yAxis')
 import Gargantext.Components.Charts.Options.Series (TreeNode, Trees(..), mkTree)
 import Gargantext.Components.Charts.Options.Font (mkTooltip, templateFormatter)
-import Gargantext.Ends (url)
 import Gargantext.Hooks.Loader (useLoader)
 import Gargantext.Components.Nodes.Corpus.Chart.Utils as U
 import Gargantext.Routes (SessionRoute(..))

src/Gargantext/Components/Nodes/Corpus/Document.purs

 module Gargantext.Components.Nodes.Corpus.Document where
 
-import Prelude (class Show, bind, identity, mempty, pure, ($))
+import Prelude (class Show, bind, identity, mempty, pure, ($), (<>))
 import Data.Argonaut (class DecodeJson, decodeJson, (.:), (.:?))
 import Data.Generic.Rep (class Generic)
 import Data.Generic.Rep.Show (genericShow)
@@ -23,6 +23,7 @@ import Gargantext.Hooks.Loader (useLoader)
 import Gargantext.Routes (SessionRoute(..))
 import Gargantext.Sessions (Session, get)
 import Gargantext.Types (CTabNgramType(..), NodeType(..), TabSubType(..), TabType(..), TermList, ScoreType(..))
+import Gargantext.Utils as U
 import Gargantext.Utils.Reactix as R2
 
 type DocPath =
@@ -143,6 +144,12 @@ data Document
     --, text               :: Maybe String
     }
 
+publicationDate :: Document -> String
+publicationDate (Document doc@{publication_year: Nothing}) = ""
+publicationDate (Document doc@{publication_year: Just py, publication_month: Nothing}) = U.zeroPad 2 py
+publicationDate (Document doc@{publication_year: Just py, publication_month: Just pm, publication_day: Nothing}) = (U.zeroPad 2 py) <> "-" <> (U.zeroPad 2 pm)
+publicationDate (Document doc@{publication_year: Just py, publication_month: Just pm, publication_day: Just pd}) = (U.zeroPad 2 py) <> "-" <> (U.zeroPad 2 pm) <> "-" <> (U.zeroPad 2 pd)
+
 defaultNodeDocument :: NodeDocument
 defaultNodeDocument =
   NodePoly { id : 0
@@ -322,7 +329,7 @@ docViewSpec = simpleSpec performAction render
               , li' [ span [] [text' doc.authors]
                     , badge "authors"
                     ]
-              , li' [ span [] [text' doc.publication_date]
+              , li' [ span [] [text $ publicationDate $ Document doc]
                     , badge "date"
                     ]
               ]

src/Gargantext/Components/Search/SearchBar.purs

@@ -2,9 +2,8 @@ module Gargantext.Components.Search.SearchBar
   ( Props, searchBar, searchBarCpt
   ) where
 
-import Prelude (Unit, bind, discard, not, pure, show, ($), (<>), map)
+import Prelude (Unit, bind, discard, pure, ($))
 import Data.Maybe (Maybe(..))
-import Data.Array (nub, concat)
 import Data.Newtype (over)
 import Data.Tuple.Nested ((/\))
 import Effect (Effect)

src/Gargantext/Components/Search/Types.purs

 module Gargantext.Components.Search.Types where
 
-import Prelude (class Eq, class Show, show, ($), (<>), map, (&&), (==))
+import Prelude (class Eq, class Show, show, ($), (<>), map)
 import Data.Set (Set)
 import Data.Ord
 import Data.Set as Set
 import Data.Array (concat)
 import Data.Argonaut (class EncodeJson, class DecodeJson, jsonEmptyObject, (:=), (~>), encodeJson)
-import Data.Generic.Rep (class Generic)
-import Data.Generic.Rep.Eq (genericEq)
-import Data.Generic.Rep.Show (genericShow)
 import Data.Maybe (Maybe(..), fromMaybe, maybe)
 import Data.Newtype (class Newtype)
 import Data.Tuple (Tuple)
 import Data.Tuple.Nested ((/\))
 import Effect.Aff (Aff)
 import Gargantext.Ends (class ToUrl, backendUrl)
-import Gargantext.Routes (SessionRoute(..))
-import Gargantext.Sessions (Session(..), post, put)
-import Gargantext.Types (class ToQuery, toQuery, NodeType(..))
+import Gargantext.Sessions (Session(..), post)
+import Gargantext.Types (class ToQuery, toQuery)
 import Gargantext.Utils (id)
 import URI.Extra.QueryPairs as QP
 import URI.Query as Q

src/Gargantext/Components/Tab.purs

@@ -30,7 +30,7 @@ tabsCpt = R.hooksComponent "G.C.Tab.tabs" cpt
         eq = index == selected
         className = "nav-item nav-link" <> (if eq then " active" else "")
         click e = setActiveTab (const index)
-    item selected index (_ /\ cpt) = tab { selected, index } [ cpt ]
+    item selected index (_ /\ cpt') = tab { selected, index } [ cpt' ]
 
 -- TODO: document what these are (selection, item indices)
 type TabProps = ( selected :: Int, index :: Int )

src/Gargantext/Components/Table.purs

@@ -7,8 +7,6 @@ import Data.Generic.Rep.Show (genericShow)
 import Data.Maybe (Maybe(..))
 import Data.Tuple (fst, snd)
 import Data.Tuple.Nested ((/\))
-import DOM.Simple.Console (log2)
-import Effect (Effect)
 import Reactix as R
 import Reactix.DOM.HTML as H
 import Gargantext.Utils.Reactix as R2

src/Gargantext/Data/Array.purs

@@ -4,7 +4,6 @@ module Gargantext.Data.Array
 
 import Data.Tuple (Tuple(..))
 import Data.Array as DA
-import Data.Maybe as DM
 import Data.Sequence as DS
 
 

src/Gargantext/Ends.purs

@@ -99,6 +99,8 @@ instance toUrlFrontendAppRoute :: ToUrl Frontend R.AppRoute where
 -- | The currently selected App and Static configurations
 newtype Frontends = Frontends { app :: Frontend, static :: Frontend }
 
+derive instance eqFrontends :: Eq Frontends
+
 instance toUrlFrontendsRoutes :: ToUrl Frontends R.AppRoute where
   toUrl f r = appUrl f (R.appPath r)
 

src/Gargantext/Hooks/Loader.purs

 module Gargantext.Hooks.Loader where
 
 import Gargantext.Prelude
-import Data.Maybe (Maybe(..), isNothing, maybe, maybe')
+import Data.Maybe (Maybe(..), isJust, maybe)
 import Data.Tuple (fst)
 import Data.Tuple.Nested ((/\))
 import Effect.Aff (Aff)
@@ -10,55 +10,26 @@ import Reactix as R
 import Gargantext.Utils.Reactix as R2
 import Gargantext.Components.LoadingSpinner (loadingSpinner)
 
-useAff :: forall st.
-          Aff st -> R.Hooks (Maybe st)
-useAff loader = do
-  (loaded /\ setLoaded) <- R.useState' Nothing
-  R.useEffect1 loader $ do
-    if isNothing loaded then
-      R2.affEffect "G.H.Loader.useAff" $
-        loader >>= (liftEffect <<< setLoaded <<< const <<< Just)
-    else pure R.nothing
-  pure loaded
-
-useLoader :: forall path st.
-             path -> (path -> Aff st) -> (st -> R.Element) -> R.Hooks R.Element
-useLoader path loader render
-  =   maybe' (\_ -> loadingSpinner {}) render
-  <$> (useAff =<< R.useMemo2 path loader (\_ -> loader path))
-
-useLoader2 :: forall path st.
-              R.State path -> (path -> Aff st) 
+useLoader :: forall path st. Eq path =>
+             path -> (path -> Aff st)
              -> (st -> R.Element) -> R.Hooks R.Element
-useLoader2 path loader render = do
+useLoader path loader render = do
   state <- R.useState' Nothing
-  useLoaderEffect2 path state loader
+  useLoaderEffect path state loader
   pure $ maybe (loadingSpinner {}) render (fst state)
 
-useLoaderEffect :: forall state.
-                   Aff state -> R.State (Maybe state) -> R.Hooks Unit
-useLoaderEffect loader (state /\ setState) = do
-  R.useEffect2 state loader $ do
-    if isNothing state then
-      R2.affEffect "G.H.Loader.useLoader" $ loader >>= (liftEffect <<< setState <<< const <<< Just)
-    else pure R.nothing
-
-useLoaderEffect' :: forall state.
-                    Aff state -> R.Hooks (R.State (Maybe state))
-useLoaderEffect' aff = do
-  state <- R.useState' Nothing
-  useLoaderEffect aff state
-  pure state
-
-useLoaderEffect2 :: forall st path.
-                    R.State path -> R.State (Maybe st)
+useLoaderEffect :: forall st path. Eq path =>
+                   path -> R.State (Maybe st)
                    -> (path -> Aff st) -> R.Hooks Unit
-useLoaderEffect2 path state loader = do
-  aff <- useRepointer path loader
-  useLoaderEffect aff state
-
-useRepointer :: forall path st.
-                R.State path -> (path -> Aff st) -> R.Hooks (Aff st)
-useRepointer path@(path' /\ _) loader = R.useMemo2 loader path' (\_ -> loader path')
-
-
+useLoaderEffect path state@(state' /\ setState) loader = do
+  oPath <- R.useRef path
+
+  R.useEffect' $ do
+    if (R.readRef oPath == path) && (isJust state') then
+      pure $ pure unit
+    else do
+      R.setRef oPath path
+
+      R2.affEffect "G.H.Loader.useLoaderEffect2" $ do
+        l <- loader path
+        liftEffect $ setState $ const $ Just l

src/Gargantext/Hooks/Sigmax.purs

 module Gargantext.Hooks.Sigmax
-  -- (
-  -- )
   where
 
 import DOM.Simple.Console (log, log2)
 import DOM.Simple.Types (Element)
 import Data.Array as A
-import Data.Either (Either(..), either)
+import Data.Either (either)
 import Data.Foldable (sequence_)
 import Data.Map as Map
 import Data.Maybe (Maybe(..))
@@ -20,11 +18,11 @@ import Data.Tuple.Nested((/\))
 import Effect (Effect)
 import Effect.Class.Console (error)
 import Effect.Timer (TimeoutId, clearTimeout)
-import FFI.Simple (delay, (.=))
+import FFI.Simple ((.=))
 import Gargantext.Hooks.Sigmax.Sigma as Sigma
-import Gargantext.Hooks.Sigmax.Types (Graph(..), Node(..), NodesMap, SelectedNodeIds)
+import Gargantext.Hooks.Sigmax.Types (Graph(..), NodesMap, SelectedNodeIds)
 import Gargantext.Utils.Reactix as R2
-import Prelude (Unit, bind, const, discard, flip, pure, unit, ($), (*>), (<$), (<$>), (<<<), (<>), (>>=), not)
+import Prelude (Unit, bind, discard, flip, pure, unit, ($), (*>), (<<<), (<>), (>>=), not)
 import Reactix as R
 
 type Sigma =

src/Gargantext/Hooks/Sigmax/Sigma.purs

@@ -3,9 +3,9 @@ module Gargantext.Hooks.Sigmax.Sigma where
 import Prelude
 import Data.Either (Either(..))
 import Data.Nullable (notNull, null, Nullable)
-import DOM.Simple.Console (log, log2)
+import DOM.Simple.Console (log2)
 import DOM.Simple.Types (Element)
-import FFI.Simple (delay, (..))
+import FFI.Simple ((..))
 import Effect (Effect, foreachE)
 import Effect.Timer (setTimeout)
 import Effect.Uncurried (EffectFn1, mkEffectFn1, runEffectFn1, EffectFn2, runEffectFn2, EffectFn3, runEffectFn3, EffectFn4, runEffectFn4)
@@ -82,19 +82,19 @@ foreign import _killRenderer
             (Either err Unit)
 
 getRendererContainer :: Sigma -> Effect Element
-getRendererContainer sigma = runEffectFn1 _getRendererContainer sigma
+getRendererContainer = runEffectFn1 _getRendererContainer
 
 foreign import _getRendererContainer
   :: EffectFn1 Sigma Element
 
 swapRendererContainer :: R.Ref (Nullable Element) -> Sigma -> Effect Unit
-swapRendererContainer ref sigma = do
-  el <- getRendererContainer sigma
+swapRendererContainer ref s = do
+  el <- getRendererContainer s
   log2 "[swapRendererContainer] el" el
   R.setRef ref $ notNull el
 
 setRendererContainer :: Sigma -> Element -> Effect Unit
-setRendererContainer sigma el = runEffectFn2 _setRendererContainer sigma el
+setRendererContainer = runEffectFn2 _setRendererContainer
 
 foreign import _setRendererContainer
   :: EffectFn2 Sigma Element Unit
@@ -119,10 +119,10 @@ bind_ s e h = runEffectFn3 _bind s e (mkEffectFn1 h)
 
 foreign import _bind :: forall e. EffectFn3 Sigma String (EffectFn1 e Unit) Unit
 
-unbind_ :: forall e. Sigma -> String -> Effect Unit
+unbind_ :: Sigma -> String -> Effect Unit
 unbind_ s e = runEffectFn2 _unbind s e
 
-foreign import _unbind :: forall e. EffectFn2 Sigma String Unit
+foreign import _unbind :: EffectFn2 Sigma String Unit
 
 forEachNode :: Sigma -> (Record Types.Node -> Effect Unit) -> Effect Unit
 forEachNode s f = runEffectFn2 _forEachNode s (mkEffectFn1 f)
@@ -135,17 +135,17 @@ forEachEdge s f = runEffectFn2 _forEachEdge s (mkEffectFn1 f)
 foreign import _forEachEdge :: EffectFn2 Sigma (EffectFn1 (Record Types.Edge) Unit) Unit
 
 bindClickNode :: Sigma -> (Record Types.Node -> Effect Unit) -> Effect Unit
-bindClickNode sigma f = bind_ sigma "clickNode" $ \e -> do
+bindClickNode s f = bind_ s "clickNode" $ \e -> do
   let node = e .. "data" .. "node" :: Record Types.Node
   f node
 
 unbindClickNode :: Sigma -> Effect Unit
-unbindClickNode sigma = unbind_ sigma "clickNode"
+unbindClickNode s = unbind_ s "clickNode"
 
 setSettings :: forall settings. Sigma -> settings -> Effect Unit
-setSettings sigma settings = do
-  runEffectFn2 _setSettings sigma settings
-  refresh sigma
+setSettings s settings = do
+  runEffectFn2 _setSettings s settings
+  refresh s
 
 foreign import _setSettings :: forall settings. EffectFn2 Sigma settings Unit
 
@@ -153,7 +153,7 @@ startForceAtlas2 :: forall settings. Sigma -> settings -> Effect Unit
 startForceAtlas2 = runEffectFn2 _startForceAtlas2
 
 restartForceAtlas2 :: Sigma -> Effect Unit
-restartForceAtlas2 sigma = runEffectFn2 _startForceAtlas2 sigma null
+restartForceAtlas2 s = runEffectFn2 _startForceAtlas2 s null
 
 stopForceAtlas2 :: Sigma -> Effect Unit
 stopForceAtlas2 = runEffectFn1 _stopForceAtlas2
@@ -170,15 +170,15 @@ foreign import _killForceAtlas2 :: EffectFn1 Sigma Unit
 foreign import _isForceAtlas2Running :: EffectFn1 Sigma Boolean
 
 refreshForceAtlas :: Sigma -> Effect Unit
-refreshForceAtlas sigma = do
-  isRunning <- isForceAtlas2Running sigma
+refreshForceAtlas s = do
+  isRunning <- isForceAtlas2Running s
   if isRunning then
     pure unit
   else do
     _ <- setTimeout 100 $ do
-      restartForceAtlas2 sigma
+      restartForceAtlas2 s
       _ <- setTimeout 100 $
-        stopForceAtlas2 sigma
+        stopForceAtlas2 s
       pure unit
     pure unit
 
@@ -224,6 +224,6 @@ goTo props cam = do
 foreign import _goTo :: EffectFn2 CameraInstance (Record CameraProps) Unit
 
 goToAllCameras :: Sigma -> Record CameraProps -> Effect Unit
-goToAllCameras sigma props = do
-  cs <- cameras sigma
+goToAllCameras s props = do
+  cs <- cameras s
   foreachE cs (goTo props)

src/Gargantext/Hooks/Sigmax/Types.purs

 module Gargantext.Hooks.Sigmax.Types where
 
-import Prelude (map, ($))
+import Prelude (map, ($), (&&), (==))
 import Data.Map as Map
 import Data.Sequence (Seq)
 import Data.Set as Set
@@ -35,3 +35,6 @@ nodesMap :: Graph Node Edge -> NodesMap
 nodesMap graph = do
   let (Graph {nodes}) = graph
   Map.fromFoldable $ map (\n -> Tuple n.id n) nodes
+
+eqGraph :: (Graph Node Edge) -> (Graph Node Edge) -> Boolean
+eqGraph (Graph {nodes: n1, edges: e1}) (Graph {nodes: n2, edges: e2}) = (n1 == n2) && (e1 == e2)

src/Gargantext/Routes.purs

@@ -19,6 +19,8 @@ data AppRoute
     | UserPage       SessionId Int
     | ContactPage    SessionId Int Int
 
+derive instance eqAppRoute :: Eq AppRoute
+
 type AnnuaireId = Int
 type ContactId = Int
 

src/Gargantext/Utils.purs

@@ -5,6 +5,8 @@ import Data.Lens (Lens', lens)
 import Data.Newtype (class Newtype, unwrap, wrap)
 import Data.Set as Set
 import Data.Set (Set)
+import Data.String (length)
+import Math (log)
 
 -- | Astonishingly, not in the prelude
 id :: forall a. a -> a
@@ -57,5 +59,18 @@ glyphicon t = "btn glyphitem glyphicon glyphicon-" <> t
 glyphiconActive :: String -> Boolean -> String
 glyphiconActive icon b = glyphicon icon <> if b then " active" else ""
 
+-- | Logarithm with given base
+logb :: Number -> Number -> Number
+logb base n = (log n) / (log base)
 
+log10 :: Number -> Number
+log10 = logb 10.0
 
+-- | Format a number with specified amount of zero-padding
+zeroPad :: Int -> Int -> String
+zeroPad pad num = zeros <> (show num)
+  where
+    numDigits = length $ show num
+    zeros = if numDigits < pad then zeros' (pad - numDigits) else ""
+    zeros' 0 = ""
+    zeros' n = "0" <> (zeros' (n - 1))

src/Gargantext/Utils/Reactix.purs

 module Gargantext.Utils.Reactix where
 
 import Prelude
-import Data.Maybe (Maybe(..))
-import Data.Nullable (Nullable, null, toMaybe)
-import Data.Tuple (Tuple)
-import Data.Tuple.Nested ((/\))
+
 import DOM.Simple as DOM
-import DOM.Simple.Console (log, log2)
+import DOM.Simple.Console (log2)
 import DOM.Simple.Document (document)
-import DOM.Simple.Event as DE
 import DOM.Simple.Element as Element
+import DOM.Simple.Event as DE
 import DOM.Simple.Types (class IsNode)
+import Data.Maybe (Maybe(..))
+import Data.Nullable (Nullable, null, toMaybe)
+import Data.Tuple (Tuple)
+import Data.Tuple.Nested ((/\))
 import Effect (Effect)
-import Effect.Class (liftEffect)
 import Effect.Aff (Aff, launchAff, launchAff_, killFiber)
+import Effect.Class (liftEffect)
 import Effect.Exception (error)
 import Effect.Uncurried (EffectFn1, runEffectFn1, mkEffectFn1, mkEffectFn2)
 import FFI.Simple ((...), defineProperty, delay, args2, args3)
@@ -191,3 +192,19 @@ appendChildToParentId ps c = delay unit $ \_ -> do
 
 effectLink :: Effect Unit -> String -> R.Element
 effectLink eff msg = H.a {on: {click: const eff}} [H.text msg]
+
+useCache :: forall i o. Eq i => i -> (i -> R.Hooks o) -> R.Hooks o
+useCache i f = do
+  iRef <- R.useRef Nothing
+  oRef <- R.useRef Nothing
+  let currI = R.readRef iRef
+  let currO = R.readRef oRef
+  if currI == Just i then
+    case currO of
+      Nothing -> f i -- this one shouldn't happen, but purescript
+      Just v -> pure v
+  else do
+    new <- f i
+    R.unsafeHooksEffect (R.setRef iRef $ Just i)
+    R.unsafeHooksEffect (R.setRef oRef $ Just new)
+    pure new

test/Gargantext/Utils/Spec.purs

+module Gargantext.Utils.Spec where
+
+import Prelude
+import Data.Array (index)
+import Data.Foldable (all)
+import Data.Maybe (Maybe(..), isJust)
+import Data.String (drop, stripPrefix, Pattern(..))
+import Data.Tuple (Tuple(..))
+import Gargantext.Utils as U
+-- import Test.QuickCheck ((===), (/==), (<?>), Result(..))
+import Test.Spec (Spec, describe, it)
+import Test.Spec.Assertions (shouldEqual)
+import Test.Spec.QuickCheck (quickCheck')
+
+spec :: Spec Unit
+spec =
+  describe "G.Utils" do
+    it "zeroPad 1 works" do
+      U.zeroPad 1 0 `shouldEqual` "0"
+      U.zeroPad 1 1 `shouldEqual` "1"
+      U.zeroPad 1 10 `shouldEqual` "10"
+    it "zeroPad 2 works" do
+      U.zeroPad 2 0 `shouldEqual` "00"
+      U.zeroPad 2 1 `shouldEqual` "01"
+      U.zeroPad 2 10 `shouldEqual` "10"
+      U.zeroPad 2 100 `shouldEqual` "100"
+    it "zeroPad 3 works" do
+      U.zeroPad 3 0 `shouldEqual` "000"
+      U.zeroPad 3 1 `shouldEqual` "001"
+      U.zeroPad 3 10 `shouldEqual` "010"
+      U.zeroPad 3 99 `shouldEqual` "099"
+      U.zeroPad 3 100 `shouldEqual` "100"
+      U.zeroPad 3 101 `shouldEqual` "101"
+      U.zeroPad 3 1000 `shouldEqual` "1000"
+    it "log10 10" do
+      U.log10 10.0 `shouldEqual` 1.0

test/Main.purs

@@ -5,7 +5,9 @@ import Effect (Effect)
 import Effect.Aff (launchAff_)
 import Test.Spec.Discovery (discover)
 import Test.Spec.Reporter.Console (consoleReporter)
-import Test.Spec.Runner (run)
+import Test.Spec.Runner (runSpec)
 
 main :: Effect Unit
-main = discover "Gargantext\\..*Spec" >>= run [consoleReporter] >>> launchAff_
+main = launchAff_ do
+  specs <- discover "Gargantext\\..*Spec"
+  runSpec [consoleReporter] specs