Commit b98b6d02 authored by qlobbe's avatar qlobbe

change from the epique workshop

parent 0225091d
......@@ -133,8 +133,8 @@ defaultConfig =
, phyloName = pack "Default Phylo"
, phyloLevel = 2
, phyloProximity = WeightedLogJaccard 10 0 0.1
, phyloSynchrony = ByProximityThreshold 0.2 0 SiblingBranches MergeAllGroups
, phyloQuality = Quality 10 1
, phyloSynchrony = ByProximityThreshold 1 0 SiblingBranches MergeAllGroups
, phyloQuality = Quality 1 1
, timeUnit = Year 3 1 5
, clique = Fis 1 5
, exportLabel = [BranchLabel MostInclusive 2, GroupLabel MostEmergentInclusive 2]
......
......@@ -38,6 +38,9 @@ import Data.GraphViz.Types.Generalised (DotGraph)
import qualified Data.Vector as Vector
---------------------------------
-- | STEP 5 | -- Export the phylo
---------------------------------
phyloExport :: IO ()
phyloExport = dotToFile "/home/qlobbe/data/phylo/output/cesar_cleopatre_V2.dot" phyloDot
......@@ -45,6 +48,10 @@ phyloExport = dotToFile "/home/qlobbe/data/phylo/output/cesar_cleopatre_V2.dot"
phyloDot :: DotGraph DotId
phyloDot = toPhyloExport phylo2
--------------------------------------------------
-- | STEP 4 | -- Process the synchronic clustering
--------------------------------------------------
phylo2 :: Phylo
phylo2 = synchronicClustering phylo1
......
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