[refactoring] more record syntax refactoring

src/Gargantext/Core/Text/Corpus/API/Hal.hs

@@ -31,23 +31,23 @@ get la q ml = do
 toDoc' :: Lang -> HAL.Corpus -> IO HyperdataDocument
 toDoc' la (HAL.Corpus i t ab d s aus affs struct_id) = do
   (utctime, (pub_year, pub_month, pub_day)) <- Date.dateSplit la (maybe (Just "2019") Just d)
-  pure $ HyperdataDocument (Just "Hal")
-                   (Just $ pack $ show i)
-                   Nothing
-                   Nothing
-                   Nothing
-                   Nothing
-                   (Just $ intercalate " " t)
-                   (Just $ foldl (\x y -> x <> ", " <> y) "" aus)
-                   (Just $ foldl (\x y -> x <> ", " <> y) "" $ affs <> map (cs . show) struct_id)
-                   (Just $ maybe "Nothing" identity s)
-                   (Just $ intercalate " " ab)
-                   (fmap (pack . show) utctime)
-                   pub_year
-                   pub_month
-                   pub_day
-                   Nothing
-                   Nothing
-                   Nothing
-                  (Just $ (pack . show) la)
+  pure $ HyperdataDocument { _hd_bdd = Just "Hal"
+                           , _hd_doi = Just $ pack $ show i
+                           , _hd_url = Nothing
+                           , _hd_uniqId = Nothing
+                           , _hd_uniqIdBdd = Nothing
+                           , _hd_page = Nothing
+                           , _hd_title = Just $ intercalate " " t
+                           , _hd_authors = Just $ foldl (\x y -> x <> ", " <> y) "" aus
+                           , _hd_institutes = Just $ foldl (\x y -> x <> ", " <> y) "" $ affs <> map (cs . show) struct_id
+                           , _hd_source = Just $ maybe "Nothing" identity s
+                           , _hd_abstract = Just $ intercalate " " ab
+                           , _hd_publication_date = fmap (pack . show) utctime
+                           , _hd_publication_year = pub_year
+                           , _hd_publication_month = pub_month
+                           , _hd_publication_day = pub_day
+                           , _hd_publication_hour = Nothing
+                           , _hd_publication_minute = Nothing
+                           , _hd_publication_second = Nothing
+                           , _hd_language_iso2 = Just $ (pack . show) la }
 

src/Gargantext/Core/Text/Corpus/API/Istex.hs

@@ -39,22 +39,23 @@ toDoc' la docs' = do
 toDoc :: Lang -> ISTEX.Document -> IO HyperdataDocument
 toDoc la (ISTEX.Document i t a ab d s) = do
   (utctime, (pub_year, pub_month, pub_day)) <- Date.dateSplit la (maybe (Just "2019") (Just . pack . show) d)
-  pure $ HyperdataDocument (Just "Istex")
-                   (Just i)
-                   Nothing
-                   Nothing
-                   Nothing
-                   Nothing
-                   t
-                   (Just $ foldl (\x y -> x <> ", " <> y) "" (map ISTEX._author_name a))
-                   (Just $ foldl (\x y -> x <> ", " <> y) "" (concat $ (map ISTEX._author_affiliations) a))
-                   (Just $ foldl (\x y -> x <> ", " <> y) "" (catMaybes $ map ISTEX._source_title s))
-                   ab
-                   (fmap (pack . show) utctime)
-                   pub_year
-                   pub_month
-                   pub_day
-                   Nothing
-                   Nothing
-                   Nothing
-                  (Just $ (pack . show) la)
+  pure $ HyperdataDocument { _hd_bdd = Just "Istex"
+                           , _hd_doi = Just i
+                           , _hd_url = Nothing
+                           , _hd_uniqId = Nothing
+                           , _hd_uniqIdBdd = Nothing
+                           , _hd_page = Nothing
+                           , _hd_title = t
+                           , _hd_authors = Just $ foldl (\x y -> x <> ", " <> y) "" (map ISTEX._author_name a)
+                           , _hd_institutes = Just $ foldl (\x y -> x <> ", " <> y) "" (concat $ (map ISTEX._author_affiliations) a)
+                           , _hd_source = Just $ foldl (\x y -> x <> ", " <> y) "" (catMaybes $ map ISTEX._source_title s)
+                           , _hd_abstract = ab
+                           , _hd_publication_date = fmap (pack . show) utctime
+                           , _hd_publication_year = pub_year
+                           , _hd_publication_month = pub_month
+                           , _hd_publication_day = pub_day
+                           , _hd_publication_hour = Nothing
+                           , _hd_publication_minute = Nothing
+                           , _hd_publication_second = Nothing
+                           , _hd_language_iso2 = Just $ (pack . show) la }
+                         

src/Gargantext/Core/Text/Corpus/API/Pubmed.hs

@@ -38,25 +38,25 @@ get q l = either (\e -> panic $ "CRAWL: PubMed" <> e) (map (toDoc EN))
 toDoc :: Lang -> PubMedDoc.PubMed -> HyperdataDocument
 toDoc l (PubMedDoc.PubMed (PubMedDoc.PubMedArticle t j as aus)
                     (PubMedDoc.PubMedDate a y m d)
-          ) = HyperdataDocument (Just "PubMed")
-                                 Nothing
-                                 Nothing
-                                 Nothing
-                                 Nothing
-                                 Nothing
-                                 t
-                                 (authors aus)
-                                 (institutes aus)
-                                 j
-                                 (abstract as)
-                                 (Just $ Text.pack $ show a)
-                                 (Just $ fromIntegral y)
-                                 (Just m)
-                                 (Just d)
-                                 Nothing
-                                 Nothing
-                                 Nothing
-                                 (Just $ (Text.pack . show) l)
+          ) = HyperdataDocument { _hd_bdd = Just "PubMed"
+                                , _hd_doi = Nothing
+                                , _hd_url = Nothing
+                                , _hd_uniqId = Nothing
+                                , _hd_uniqIdBdd = Nothing
+                                , _hd_page = Nothing
+                                , _hd_title = t
+                                , _hd_authors = authors aus
+                                , _hd_institutes = institutes aus
+                                , _hd_source = j
+                                , _hd_abstract = abstract as
+                                , _hd_publication_date = Just $ Text.pack $ show a
+                                , _hd_publication_year = Just $ fromIntegral y
+                                , _hd_publication_month = Just m
+                                , _hd_publication_day = Just d
+                                , _hd_publication_hour = Nothing
+                                , _hd_publication_minute = Nothing
+                                , _hd_publication_second = Nothing
+                                , _hd_language_iso2 = Just $ (Text.pack . show) l }
       where
         authors :: Maybe [PubMedDoc.Author] -> Maybe Text
         authors aus' = case aus' of

src/Gargantext/Core/Text/Corpus/Parsers.hs

@@ -122,25 +122,25 @@ toDoc ff d = do
 
       (utcTime, (pub_year, pub_month, pub_day)) <- Date.dateSplit lang  dateToParse
 
-      pure $ HyperdataDocument (Just $ DT.pack $ show ff)
-                               (lookup "doi" d)
-                               (lookup "URL" d)
-                                Nothing
-                                Nothing
-                                Nothing
-                               (lookup "title" d)
-                                Nothing
-                               (lookup "authors" d)
-                               (lookup "source" d)
-                               (lookup "abstract" d)
-                               (fmap (DT.pack . show) utcTime)
-                               (pub_year)
-                               (pub_month)
-                               (pub_day)
-                               Nothing
-                               Nothing
-                               Nothing
-                               (Just $ (DT.pack . show) lang)
+      pure $ HyperdataDocument { _hd_bdd = Just $ DT.pack $ show ff
+                               , _hd_doi = lookup "doi" d
+                               , _hd_url = lookup "URL" d
+                               , _hd_uniqId = Nothing
+                               , _hd_uniqIdBdd = Nothing
+                               , _hd_page = Nothing
+                               , _hd_title = lookup "title" d
+                               , _hd_authors = Nothing
+                               , _hd_institutes = lookup "authors" d
+                               , _hd_source = lookup "source" d
+                               , _hd_abstract = lookup "abstract" d
+                               , _hd_publication_date = fmap (DT.pack . show) utcTime
+                               , _hd_publication_year = pub_year
+                               , _hd_publication_month = pub_month
+                               , _hd_publication_day = pub_day
+                               , _hd_publication_hour = Nothing
+                               , _hd_publication_minute = Nothing
+                               , _hd_publication_second = Nothing
+                               , _hd_language_iso2 = Just $ (DT.pack . show) lang }
 
 enrichWith :: FileFormat
            ->  (a, [[[(DB.ByteString, DB.ByteString)]]]) -> (a, [[(Text, Text)]])

src/Gargantext/Core/Text/Corpus/Parsers/GrandDebat.hs

@@ -75,18 +75,26 @@ instance ToJSON GrandDebatReference
 
 instance ToHyperdataDocument GrandDebatReference
   where
-    toHyperdataDocument (GrandDebatReference id' _ref title'
-                                   _createdAt' publishedAt' _updatedAt
-                                   _trashed _trashedStatus
-                                   _authorId authorType' authorZipCode'
-                                   responses') =
-      HyperdataDocument (Just "GrandDebat") id'
-                         Nothing Nothing Nothing Nothing
-                         title' authorType' authorType' authorZipCode'
-                        (toAbstract <$> responses')
-                         publishedAt'
-                         Nothing Nothing Nothing Nothing Nothing Nothing
-                        (Just $ Text.pack $ show FR)
+    toHyperdataDocument (GrandDebatReference { id, title, publishedAt, authorType, authorZipCode, responses }) =
+      HyperdataDocument { _hd_bdd = Just "GrandDebat"
+                        , _hd_doi = id
+                        , _hd_url = Nothing
+                        , _hd_uniqId = Nothing
+                        , _hd_uniqIdBdd = Nothing
+                        , _hd_page = Nothing
+                        , _hd_title = title
+                        , _hd_authors = authorType
+                        , _hd_institutes = authorType
+                        , _hd_source = authorZipCode
+                        , _hd_abstract = toAbstract <$> responses
+                        , _hd_publication_date = publishedAt
+                        , _hd_publication_year = Nothing
+                        , _hd_publication_month = Nothing
+                        , _hd_publication_day = Nothing
+                        , _hd_publication_hour = Nothing
+                        , _hd_publication_minute = Nothing
+                        , _hd_publication_second = Nothing
+                        , _hd_language_iso2 = Just $ Text.pack $ show FR }
         where
           toAbstract = (Text.intercalate " . ") . ((filter (/= "")) . (map toSentence))
           toSentence (GrandDebatResponse _id _qtitle _qvalue r) = case r of

src/Gargantext/Core/Text/Corpus/Parsers/Isidore.hs

@@ -119,17 +119,24 @@ unbound _ _ = Nothing
 
 bind2doc :: Lang -> [BindingValue] -> HyperdataDocument
 bind2doc l [ link, date, langDoc, authors, _source, publisher, title, abstract ] =
-  HyperdataDocument (Just "Isidore")
-                      Nothing
-                      (unbound l link)
-                      Nothing Nothing Nothing
-                      (unbound l title)
-                      (unbound l authors)
-                      Nothing
-                      (unbound l publisher)
-                      (unbound l abstract)
-                      (unbound l date)
-                      Nothing Nothing Nothing Nothing Nothing Nothing
-                      (unbound l langDoc)
+  HyperdataDocument { _hd_bdd = Just "Isidore"
+                    , _hd_doi = Nothing
+                    , _hd_url = unbound l link
+                    , _hd_uniqId = Nothing
+                    , _hd_uniqIdBdd = Nothing
+                    , _hd_page = Nothing
+                    , _hd_title = unbound l title
+                    , _hd_authors = unbound l authors
+                    , _hd_institutes = Nothing
+                    , _hd_source = unbound l publisher
+                    , _hd_abstract = unbound l abstract
+                    , _hd_publication_date = unbound l date
+                    , _hd_publication_year = Nothing
+                    , _hd_publication_month = Nothing
+                    , _hd_publication_day = Nothing
+                    , _hd_publication_hour = Nothing
+                    , _hd_publication_minute = Nothing
+                    , _hd_publication_second = Nothing
+                    , _hd_language_iso2 = unbound l langDoc }
 
 bind2doc _ _  = undefined

src/Gargantext/Core/Text/Corpus/Parsers/Json2Csv.hs

@@ -48,8 +48,14 @@ json2csv fin fout = do
   writeFile fout (headerCsvGargV3, fromList $ map patent2csvDoc patents)
 
 patent2csvDoc :: Patent -> CsvDoc
-patent2csvDoc (Patent title abstract year _) =
-  CsvDoc title "Source" (Just $ read (unpack year)) (Just 1) (Just 1) abstract "Authors"
+patent2csvDoc (Patent { .. }) =
+  CsvDoc { csv_title = _patent_title
+         , csv_source = "Source"
+         , csv_publication_year = Just $ read (unpack _patent_year)
+         , csv_publication_month = Just 1
+         , csv_publication_day = Just 1
+         , csv_abstract = _patent_abstract
+         , csv_authors = "Authors" }
 
 
 

src/Gargantext/Core/Text/Corpus/Parsers/RIS.hs

@@ -70,3 +70,5 @@ onField :: ByteString -> (ByteString -> [(ByteString, ByteString)])
        -> [(ByteString, ByteString)] -> [(ByteString, ByteString)]
 onField k f m = m <> ( maybe [] f (lookup k m) )
 
+
+

src/Gargantext/Core/Text/Corpus/Parsers/RIS/Presse.hs

@@ -68,5 +68,3 @@ fixFields ns = map (first fixFields'') ns
                 | champs == "UR" = "url"
                 | champs == "N2" = abstract
                 | otherwise  = champs
-
-

src/Gargantext/Core/Text/Corpus/Parsers/Wikimedia.hs

@@ -95,7 +95,9 @@ parsePage =
   revision <-
     parseRevision
   many_ $ ignoreAnyTreeContent
-  return $ Page Mediawiki title revision
+  return $ Page { _markupFormat = Mediawiki
+                , _title = title
+                , _text = revision }
 
 parseMediawiki :: MonadThrow m => ConduitT Event Page m (Maybe ())
 parseMediawiki =
@@ -108,7 +110,7 @@ mediawikiPageToPlain :: Page -> IO Page
 mediawikiPageToPlain page = do
   title <- mediaToPlain $ _title page
   revision <- mediaToPlain $ _text page
-  return $ Page Plaintext title revision
+  return $ Page { _markupFormat = Plaintext, _title = title, _text = revision }
   where mediaToPlain media =
           case media of
             (Nothing) -> return Nothing

src/Gargantext/Core/Text/List.hs

@@ -86,7 +86,7 @@ buildNgramsLists user uCid mCid mfslw gp = do
 
 data MapListSize = MapListSize { unMapListSize :: !Int }
 
-buildNgramsOthersList ::( HasNodeError err
+buildNgramsOthersList :: ( HasNodeError err
                          , CmdM     env err m
                          , HasNodeStory env err m
                          , HasTreeError err

src/Gargantext/Core/Text/List/Group/WithStem.hs

@@ -72,7 +72,7 @@ groupWith :: GroupParams
             -> NgramsTerm
             -> NgramsTerm
 groupWith GroupIdentity  t = identity t
-groupWith (GroupParams l _m _n _) t =
+groupWith (GroupParams { unGroupParams_lang = l }) t =
                     NgramsTerm
                   $ Text.intercalate " "
                   $ map (stem l)
@@ -86,7 +86,7 @@ groupWith (GroupParams l _m _n _) t =
                   $ unNgramsTerm t
 
 -- | This lemmatization group done with CoreNLP algo (or others)
-groupWith (GroupWithPosTag _ _ m) t = 
+groupWith (GroupWithPosTag { _gwl_map = m }) t = 
   case HashMap.lookup (unNgramsTerm t) m of
       Nothing -> clean t
       Just t' -> clean $ NgramsTerm t'

src/Gargantext/Core/Text/Terms.hs

@@ -82,11 +82,11 @@ makeLenses ''TermType
 --extractTerms :: Traversable t => TermType Lang -> t Text -> IO (t [Terms])
 extractTerms :: TermType Lang -> [Text] -> IO [[Terms]]
 
-extractTerms (Unsupervised l n s m) xs = mapM (terms (Unsupervised l n s (Just m'))) xs
+extractTerms (Unsupervised {..}) xs = mapM (terms (Unsupervised { _tt_model = Just m', .. })) xs
   where
-    m' = case m of
+    m' = case _tt_model of
       Just m''-> m''
-      Nothing -> newTries n (Text.intercalate " " xs)
+      Nothing -> newTries _tt_windowSize (Text.intercalate " " xs)
 
 extractTerms termTypeLang xs = mapM (terms termTypeLang) xs
 
@@ -96,11 +96,12 @@ withLang :: (Foldable t, Functor t, HasText h)
          => TermType Lang
          -> t h
          -> TermType Lang
-withLang (Unsupervised l n s m) ns = Unsupervised l n s m'
+withLang (Unsupervised {..}) ns = Unsupervised { _tt_model = m', .. }
   where
-    m' = case m of
+    m' = case _tt_model of
       Nothing -> -- trace ("buildTries here" :: String)
-               Just $ buildTries n $ fmap toToken
+               Just $ buildTries _tt_ngramsSize
+                    $ fmap toToken
                     $ uniText
                     $ Text.intercalate " . "
                     $ List.concat
@@ -171,9 +172,9 @@ terms :: TermType Lang -> Text -> IO [Terms]
 terms (Mono      lang) txt = pure $ monoTerms lang txt
 terms (Multi     lang) txt = multiterms lang txt
 terms (MonoMulti lang) txt = terms (Multi lang) txt
-terms (Unsupervised lang n s m) txt = termsUnsupervised (Unsupervised lang n s (Just m')) txt
+terms (Unsupervised { .. }) txt = termsUnsupervised (Unsupervised { _tt_model = Just m', .. }) txt
   where
-    m' = maybe (newTries n txt) identity m
+    m' = maybe (newTries _tt_ngramsSize txt) identity _tt_model
 -- terms (WithList  list) txt = pure . concat $ extractTermsWithList list txt