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clinicaltrials
Commit 8a351ffa authored by PkSM3's avatar PkSM3
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global variables changed

parent 9c9ca5c6
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Showing with 451 additions and 477 deletions
LOCALDB/parameters_details.php
View file @ 8a351ffa
......@@ -8,6 +8,8 @@ $gexf_db = array();
# $gexf_db["data/ClimateChange/ClimateChangeV1.gexf"] = "data/ClimateChange/wosclimatechange-61715-1-wosclimatechange-db(2).db";
$gexf_db["data/ClimateChange/Maps_S_800.gexf"] = "data/ClimateChange/wos_climate-change_title_2014-2015.db";
$gexf_db["data/AXA/EditedJan20151980 nodes V2 PageRank.gexf"] = "data/AXA/data.db";
$gexf= str_replace('"','',$_GET["gexf"]);
$mainpath=dirname(getcwd())."/";
......
db.json
View file @ 8a351ffa
{
"data/AXA": {
"dbname":"data.db",
"title":"ISITITLE",
"date":"ISIpubdate",
"abstract":"ISIABSTRACT",
"gexfs": {
"EditedJan20151980 nodes V2 PageRank.gexf": {
"social": { "table":"ISIAUTHOR" , "textCol":"data","forkeyCol":"id"},
"semantic": { "table":"ISItermsAsbestos" , "textCol":"data","forkeyCol":"id"}
},
"asbestos.gexf": {
"social": { "table":"ISIAUTHOR" , "textCol":"data","forkeyCol":"id"},
"semantic": { "table":"ISItermsAsbestos" , "textCol":"data","forkeyCol":"id"}
}
}
},
"data/ClimateChange": {
"dbname":"wos_climate-change_title_2014-2015.db",
"title":"ISITITLE",
......
extras_explorerjs.js
View file @ 8a351ffa
......@@ -13,8 +13,8 @@ function newPopup(url) {
// then, add the button in the html with the sigmaUtils.clustersBy(x) listener.
function ChangeGraphAppearanceByAtt( manualflag ) {
if ( !isUndef(manualflag) && !colorByAtt ) colorByAtt = manualflag;
if(!colorByAtt) return;
if ( !isUndef(manualflag) && !TW.colorByAtt ) TW.colorByAtt = manualflag;
if(!TW.colorByAtt) return;
// Seeing all the possible attributes!
var AttsDict = {}
......@@ -25,8 +25,8 @@ function ChangeGraphAppearanceByAtt( manualflag ) {
var id = v_nodes[i].id;
for(var a in Nodes[id].attributes) {
var someatt = Nodes[id].attributes[a]
for(var a in TW.Nodes[id].attributes) {
var someatt = TW.Nodes[id].attributes[a]
// Identifying the attribute datatype: exclude strings and objects
if ( ( typeof(someatt)=="string" && isNaN(Number(someatt)) ) || typeof(someatt)=="object" ) {
......@@ -36,8 +36,8 @@ function ChangeGraphAppearanceByAtt( manualflag ) {
}
var possible_atts = [];
if (!isUndef(Nodes[id].attributes))
possible_atts = Object.keys(Nodes[id].attributes)
if (!isUndef(TW.Nodes[id].attributes))
possible_atts = Object.keys(TW.Nodes[id].attributes)
if(!isUndef(v_nodes[i].degree))
possible_atts.push("degree")
......@@ -118,7 +118,7 @@ function RunLouvain() {
var community = jLouvain().nodes(node_realdata).edges(edge_realdata);
var results = community();
for(var i in results)
Nodes[i].attributes["clust_louvain"]=results[i]
TW.Nodes[i].attributes["clust_louvain"]=results[i]
}
......@@ -128,7 +128,7 @@ function SomeEffect( ClusterCode ) {
var raw = ClusterCode.split("||")
var Type=raw[0], Cluster=raw[1], clstID=Number(raw[2]);
var present = partialGraph.states.slice(-1)[0]; // Last
var present = TW.partialGraph.states.slice(-1)[0]; // Last
var type_t0 = present.type;
var str_type_t0 = type_t0.map(Number).join("|")
console.log( "\t"+str_type_t0)
......@@ -143,7 +143,7 @@ function SomeEffect( ClusterCode ) {
for(var i in nodesV) {
var n = nodesV[i]
n.forceLabel = false;
var node = Nodes[n.id]
var node = TW.Nodes[n.id]
if ( node.type==Type && !isUndef(node.attributes[Cluster]) && node.attributes[Cluster]==clstID ) {
// pr( n.id + " | " + Cluster + " : " + node.attributes[Cluster] )
nodes_2_colour[n.id] = n.degree;
......@@ -152,8 +152,8 @@ function SomeEffect( ClusterCode ) {
for(var s in nodes_2_colour) {
if(Relations[str_type_t0] && Relations[str_type_t0][s] ) {
neigh = Relations[str_type_t0][s]
if(TW.Relations[str_type_t0] && TW.Relations[str_type_t0][s] ) {
neigh = TW.Relations[str_type_t0][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -168,7 +168,7 @@ function SomeEffect( ClusterCode ) {
for(var i in nodes_2_colour) {
n = partialGraph._core.graph.nodesIndex[i]
n = TW.partialGraph._core.graph.nodesIndex[i]
if(n) {
n.color = n.attr['true_color'];
n.attr['grey'] = 0;
......@@ -177,7 +177,7 @@ function SomeEffect( ClusterCode ) {
for(var i in edges_2_colour) {
an_edge = partialGraph._core.graph.edgesIndex[i]
an_edge = TW.partialGraph._core.graph.edgesIndex[i]
if(!isUndef(an_edge) && !an_edge.hidden){
// pr(an_edge)
an_edge.color = an_edge.attr['true_color'];
......@@ -197,29 +197,30 @@ function SomeEffect( ClusterCode ) {
if(n==4)
break
var ID = nodes_2_label[n].key
partialGraph._core.graph.nodesIndex[ID].forceLabel = true;
TW.partialGraph._core.graph.nodesIndex[ID].forceLabel = true;
}
overNodes=true;
partialGraph.draw()
TW.partialGraph.draw()
}
function set_ClustersLegend ( daclass ) {
//partialGraph.states.slice(-1)[0].LouvainFait = true
//TW.partialGraph.states.slice(-1)[0].LouvainFait = true
$("#legend_for_clusters").removeClass( "my-legend" )
$("#legend_for_clusters").html("")
if(daclass==null) return;
var ClustNB_CurrentColor = {}
var nodesV = getVisibleNodes()
for(var i in nodesV) {
n = nodesV[i]
color = n.color
type = Nodes[n.id].type
clstNB = Nodes[n.id].attributes[daclass]
type = TW.Nodes[n.id].type
clstNB = TW.Nodes[n.id].attributes[daclass]
ClustNB_CurrentColor[type+"||"+daclass+"||"+clstNB] = color
}
......@@ -239,15 +240,15 @@ function set_ClustersLegend ( daclass ) {
var ClustType = raw[1]
var ClustID = raw[2]
var Color = ClustNB_CurrentColor[IDx]
pr ( Color+" : "+ Clusters[Type][ClustType][ClustID] )
pr ( Color+" : "+ TW.Clusters[Type][ClustType][ClustID] )
var ColorDiv = '<span style="background:'+Color+';"></span>'
LegendDiv += '<li onclick=\'SomeEffect("'+IDx+'")\'>'+ColorDiv+ Clusters[Type][ClustType][ClustID]+"</li>"+"\n"
LegendDiv += '<li onclick=\'SomeEffect("'+IDx+'")\'>'+ColorDiv+ TW.Clusters[Type][ClustType][ClustID]+"</li>"+"\n"
}
} else {
for(var i in OrderedClustDicts) {
var IDx = OrderedClustDicts[i]
var Color = ClustNB_CurrentColor[IDx]
// pr ( Color+" : "+ Clusters[Type][ClustType][ClustID] )
// pr ( Color+" : "+ TW.Clusters[Type][ClustType][ClustID] )
var ColorDiv = '<span style="background:'+Color+';"></span>'
LegendDiv += '<li onclick=\'SomeEffect("'+IDx+'")\'>'+ColorDiv+ IDx+"</li>"+"\n"
}
......@@ -264,25 +265,25 @@ function set_ClustersLegend ( daclass ) {
//For CNRS
function getTopPapers(type){
if(getAdditionalInfo){
if(TW.getAdditionalInfo){
jsonparams=JSON.stringify(getSelections());
bi=(Object.keys(categories).length==2)?1:0;
//jsonparams = jsonparams.replaceAll("&","__and__");
jsonparams = jsonparams.split('&').join('__and__');
//dbsPaths.push(getGlobalDBs());
thisgexf=JSON.stringify(decodeURIComponent(getUrlParam.file));
image='<img style="display:block; margin: 0px auto;" src="'+APINAME+'img/ajax-loader.gif"></img>';
image='<img style="display:block; margin: 0px auto;" src="'+TW.APINAME+'img/ajax-loader.gif"></img>';
$("#tab-container-top").show();
$("#topPapers").show();
$("#topPapers").html(image);
$.ajax({
type: 'GET',
url: APINAME+'info_div.php',
data: "type="+type+"&bi="+bi+"&query="+jsonparams+"&gexf="+thisgexf+"&index="+field[getUrlParam.file],
url: TW.APINAME+'info_div.php',
data: "type="+type+"&bi="+bi+"&query="+jsonparams+"&gexf="+thisgexf+"&index="+TW.field[getUrlParam.file],
//contentType: "application/json",
//dataType: 'json',
success : function(data){
pr(APINAME+'info_div.php?'+"type="+type+"&bi="+bi+"&query="+jsonparams+"&gexf="+thisgexf+"&index="+field[getUrlParam.file]);
pr(TW.APINAME+'info_div.php?'+"type="+type+"&bi="+bi+"&query="+jsonparams+"&gexf="+thisgexf+"&index="+TW.field[getUrlParam.file]);
$("#topPapers").html(data);
},
error: function(){
......@@ -300,7 +301,7 @@ function selectionUni(currentNode){
highlightSelectedNodes(false);
opossites = [];
selections = [];
partialGraph.refresh();
TW.partialGraph.refresh();
}
if((typeof selections[currentNode.id])=="undefined"){
......@@ -318,19 +319,19 @@ function selectionUni(currentNode){
//
partialGraph.zoomTo(partialGraph._core.width / 2, partialGraph._core.height / 2, 0.8);
partialGraph.refresh();
TW.partialGraph.zoomTo(TW.partialGraph._core.width / 2, TW.partialGraph._core.height / 2, 0.8);
TW.partialGraph.refresh();
}
//JUST ADEME
function camaraButton(){
$("#PhotoGraph").click(function (){
//canvas=partialGraph._core.domElements.nodes;
//canvas=TW.partialGraph._core.domElements.nodes;
var nodesCtx = partialGraph._core.domElements.nodes;
var nodesCtx = TW.partialGraph._core.domElements.nodes;
/*
var edgesCtx = document.getElementById("sigma_edges_1").getContext('2d');
......@@ -341,12 +342,12 @@ function camaraButton(){
//ctx.drawImage(partialGraph._core.domElements.edges,0,0)
//ctx.drawImage(TW.partialGraph._core.domElements.edges,0,0)
//var oCanvas = ctx;
*/
//div = document.getElementById("sigma_nodes_1").getContext('2d');
//ctx = div.getContext("2d");
//oCanvas.drawImage(partialGraph._core.domElements.edges,0,0);
//oCanvas.drawImage(TW.partialGraph._core.domElements.edges,0,0);
Canvas2Image.saveAsPNG(nodesCtx);
/*
......@@ -423,12 +424,12 @@ function draw1Circle(ctx , x , y , color) {
function trackMouse() {
if(!shift_key) {
// $.doTimeout(300,function (){
var ctx = partialGraph._core.domElements.mouse.getContext('2d');
var ctx = TW.partialGraph._core.domElements.mouse.getContext('2d');
ctx.globalCompositeOperation = "source-over";
ctx.clearRect(0, 0, partialGraph._core.domElements.nodes.width, partialGraph._core.domElements.nodes.height);
ctx.clearRect(0, 0, TW.partialGraph._core.domElements.nodes.width, TW.partialGraph._core.domElements.nodes.height);
x = partialGraph._core.mousecaptor.mouseX;
y = partialGraph._core.mousecaptor.mouseY;
x = TW.partialGraph._core.mousecaptor.mouseX;
y = TW.partialGraph._core.mousecaptor.mouseY;
ctx.strokeStyle = '#000';
ctx.lineWidth = 1;
......@@ -436,43 +437,43 @@ function trackMouse() {
ctx.globalAlpha = 0.5;
ctx.beginPath();
if(partialGraph._core.mousecaptor.ratio>showLabelsIfZoom){
for(var i in partialGraph._core.graph.nodesIndex){
n=partialGraph._core.graph.nodesIndex[i];
if(TW.partialGraph._core.mousecaptor.ratio>showLabelsIfZoom){
for(var i in TW.partialGraph._core.graph.nodesIndex){
n=TW.partialGraph._core.graph.nodesIndex[i];
if(n.hidden==false){
distance = Math.sqrt(
Math.pow((x-parseInt(n.displayX)),2) +
Math.pow((y-parseInt(n.displayY)),2)
);
if(parseInt(distance)<=cursor_size) {
partialGraph._core.graph.nodesIndex[i].forceLabel=true;
TW.partialGraph._core.graph.nodesIndex[i].forceLabel=true;
} else {
if(typeof(n.neighbour)!=="undefined") {
if(!n.neighbour) partialGraph._core.graph.nodesIndex[i].forceLabel=false;
} else partialGraph._core.graph.nodesIndex[i].forceLabel=false;
if(!n.neighbour) TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
} else TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
}
}
}
if(partialGraph.forceatlas2 && partialGraph.forceatlas2.count<=1) {
partialGraph.draw(2,2,2);
if(TW.partialGraph.forceatlas2 && TW.partialGraph.forceatlas2.count<=1) {
TW.partialGraph.draw(2,2,2);
}
} else {
for(var i in partialGraph._core.graph.nodesIndex){
n=partialGraph._core.graph.nodesIndex[i];
for(var i in TW.partialGraph._core.graph.nodesIndex){
n=TW.partialGraph._core.graph.nodesIndex[i];
if(!n.hidden){
partialGraph._core.graph.nodesIndex[i].forceLabel=false;
TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
if(typeof(n.neighbour)!=="undefined") {
if(!n.neighbour) partialGraph._core.graph.nodesIndex[i].forceLabel=false;
else partialGraph._core.graph.nodesIndex[i].forceLabel=true;
} else partialGraph._core.graph.nodesIndex[i].forceLabel=false;
if(!n.neighbour) TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
else TW.partialGraph._core.graph.nodesIndex[i].forceLabel=true;
} else TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
}
}
if(partialGraph.forceatlas2 && partialGraph.forceatlas2.count<=1) {
partialGraph.draw(2,2,2);
if(TW.partialGraph.forceatlas2 && TW.partialGraph.forceatlas2.count<=1) {
TW.partialGraph.draw(2,2,2);
}
}
ctx.arc(x, y, cursor_size, 0, Math.PI * 2, true);
//ctx.arc(partialGraph._core.width/2, partialGraph._core.height/2, 4, 0, 2 * Math.PI, true);/*todel*/
//ctx.arc(TW.partialGraph._core.width/2, TW.partialGraph._core.height/2, 4, 0, 2 * Math.PI, true);/*todel*/
ctx.closePath();
ctx.fill();
ctx.stroke();
......
settings_explorerjs.js
View file @ 8a351ffa
/*
* Customize as you want ;)
*/
// ============ < DEVELOPER OPTIONS > ============
var geomap=false;
var colorByAtt = false;
var twittertimeline = false;
var minimap=false;
var getAdditionalInfo=false;//for topPapers div
var mainfile = ["db.json"];
// // var mainfile = "api.json";
// var mainfile = [
// "data/2-Terms-Authors-300nodes.gexf",
// "data/0-terms-terms-MainNodes.gexf",
// "data/maziyar2.json",
// "data/3-Terms-Countries-300nodes.gexf",
// // "data/noclimatechange_mnodes.gexf",
// "data/20150518t1052_phylograph.json",
// // "data/phylograph_6.json",
// // "data/maziyar.json",
// // "data/20141128_GPs_03_bi.gexf",
// // "data/example.json",
// // "data/Elisa__Omodei.gexf",
// ];
var APINAME = "LOCALDB/"
// getUrlParam.file = "data/testgraph.json";
var dataFolderTree = {};
var egonode = {}
var iwantograph = "";
var bridge={};
external="";
//external="http://tina.iscpif.fr/explorerjs/";//Just if you want to use the server-apps from tina.server
bridge["forFilteredQuery"] = external+"php/bridgeClientServer_filter.php";
bridge["forNormalQuery"] = external+"php/bridgeClientServer.php";
var gexfDict={};
// gexfDict["data/terrorism/terrorism_mono.gexf"] = "[2001-2014] TERRORISM (1-partite graph)";
// gexfDict["data/terrorism/terrorism_bi.gexf"] = "[2001-2014] TERRORISM (2-partite graph)";
var field = {}
// field["data/20141128_GPs_03_bi.gexf"] = "ISItermsfirstindexing";
// field["data/20141215_GPs_04.gexf"] = "ISItermsfirstindexing";
// field["data/medq2/20141128_MED_02_bi.gexf"] = "ISItermsBigWL";
// field["data/medq2/20141128_MED_03_bi.gexf"] = "ISItermsBigWL";
// field["data/medq2/20141208_MED_Author_name-ISItermsjulien_index.gexf"] = "ISItermsjulien_index";
// field["data/medq1/20141208_MED_01_bi.gexf"] = "ISItermsfirstindex";
// field["data/terrorism/terrorism_mono.gexf"] = "ISItermsListV1";
// field["data/terrorism/terrorism_bi.gexf"] = "ISItermsListV1";
var TW = {}
TW.geomap = false;
TW.colorByAtt = false;
TW.twittertimeline = false;
TW.minimap=false;
TW.getAdditionalInfo=false;// True: Activate TopPapers feature.
TW.mainfile = ["db.json"];
// // TW.mainfile = "api.json";
// TW.mainfile = [
// "data/2-Terms-Authors-300nodes.gexf",
// "data/0-terms-terms-MainNodes.gexf",
// "data/maziyar2.json",
// "data/3-Terms-Countries-300nodes.gexf",
// // "data/noclimatechange_mnodes.gexf",
// "data/20150518t1052_phylograph.json",
// // "data/phylograph_6.json",
// // "data/maziyar.json",
// // "data/20141128_GPs_03_bi.gexf",
// // "data/example.json",
// // "data/Elisa__Omodei.gexf",
// ];
TW.APINAME = "LOCALDB/";
TW.bridge={};
TW.bridge["forFilteredQuery"] = "php/bridgeClientServer_filter.php";
TW.bridge["forNormalQuery"] = "php/bridgeClientServer.php";
TW.gexfDict={};
TW.gexfDictReverse={}
for (var i in TW.gexfDict){
TW.gexfDictReverse[TW.gexfDict[i]]=i;
}
TW.field = {}
// field["data/20141128_GPs_03_bi.gexf"] = "ISItermsfirstindexing";
// field["data/20141215_GPs_04.gexf"] = "ISItermsfirstindexing";
TW.Relations = {}
TW.SystemStates = {}
TW.SystemStates.level = true;
TW.SystemStates.type = [ true ] //[ true , false ]; //social activated!
TW.SystemStates.selections = [];
TW.SystemStates.opposites = [];
TW.catSoc = "Document";
TW.catSem = "NGram";
var ParseCustom = function () {};
var SigmaUtils = function () {};
var TinaWebJS = function () {};
var Relations = {}
var SystemStates = {}
SystemStates.level = true;
SystemStates.type = [ true ] //[ true , false ]; //social activated!
SystemStates.selections = [];
SystemStates.opposites = [];
ircNick="";
ircCHN="";
var catSoc = "Document";
var catSem = "NGram";
var sizeMult = [];
sizeMult[catSoc] = 0.0;
sizeMult[catSem] = 0.0;
sizeMult[TW.catSoc] = 0.0;
sizeMult[TW.catSem] = 0.0;
var inactiveColor = '#666';
var startingNodeId = "1";
......@@ -155,10 +118,9 @@ var sigmaJsMouseProperties = {
// ============ < VARIABLES.JS > ============
//"http://webchat.freenode.net/?nick=Ademe&channels=#anoe"
var ircUrl="http://webchat.freenode.net/?nick="+ircNick+"&channels="+ircCHN;
var twjs="tinawebJS/";
var categories = {};
var categoriesIndex = [];
TW.categories = {};
TW.categoriesIndex = [];
var gexf;
//var zoom=0;
......@@ -183,7 +145,7 @@ var lastFilter = []
lastFilter["#slidercat0edgesweight"] = {"orig":"-" , "last":"-"}
lastFilter["#slidercat1edgesweight"] = {"orig":"-" , "last":"-"}
var Filters = {}
TW.Filters = {}
......@@ -193,11 +155,11 @@ var overviewScale = 0.25;
var overviewHover=false;
var moveDelay = 80, zoomDelay = 2;
//var Vecindad;
var partialGraph;
TW.partialGraph;
var otherGraph;
var Nodes = [];
var Edges = [];
var Clusters = [];
TW.Nodes = [];
TW.Edges = [];
TW.Clusters = [];
var nodeslength=0;
......@@ -232,10 +194,6 @@ var maxEdgeWeight=0.0;
//---------------------------------------------------
var bipartite=false;
var gexfDictReverse={}
for (var i in gexfDict){
gexfDictReverse[gexfDict[i]]=i;
}
var colorList = ["#000000", "#FFFF00", "#1CE6FF", "#FF34FF", "#FF4A46", "#008941", "#006FA6", "#A30059", "#FFDBE5", "#7A4900", "#0000A6", "#63FFAC", "#B79762", "#004D43", "#8FB0FF", "#997D87", "#5A0007", "#809693", "#FEFFE6", "#1B4400", "#4FC601", "#3B5DFF", "#4A3B53", "#FF2F80", "#61615A", "#BA0900", "#6B7900", "#00C2A0", "#FFAA92", "#FF90C9", "#B903AA", "#D16100", "#DDEFFF", "#000035", "#7B4F4B", "#A1C299", "#300018", "#0AA6D8", "#013349", "#00846F", "#372101", "#FFB500", "#C2FFED", "#A079BF", "#CC0744", "#C0B9B2", "#C2FF99", "#001E09", "#00489C", "#6F0062", "#0CBD66", "#EEC3FF", "#456D75", "#B77B68", "#7A87A1", "#788D66", "#885578", "#FAD09F", "#FF8A9A", "#D157A0", "#BEC459", "#456648", "#0086ED", "#886F4C","#34362D", "#B4A8BD", "#00A6AA", "#452C2C", "#636375", "#A3C8C9", "#FF913F", "#938A81", "#575329", "#00FECF", "#B05B6F", "#8CD0FF", "#3B9700", "#04F757", "#C8A1A1", "#1E6E00", "#7900D7", "#A77500", "#6367A9", "#A05837", "#6B002C", "#772600", "#D790FF", "#9B9700", "#549E79", "#FFF69F", "#201625", "#72418F", "#BC23FF", "#99ADC0", "#3A2465", "#922329", "#5B4534", "#FDE8DC", "#404E55", "#0089A3", "#CB7E98", "#A4E804", "#324E72", "#6A3A4C", "#83AB58", "#001C1E", "#D1F7CE", "#004B28", "#C8D0F6", "#A3A489", "#806C66", "#222800", "#BF5650", "#E83000", "#66796D", "#DA007C", "#FF1A59", "#8ADBB4", "#1E0200", "#5B4E51", "#C895C5", "#320033", "#FF6832", "#66E1D3", "#CFCDAC", "#D0AC94", "#7ED379", "#012C58"];
......
tinawebJS/Tinaweb.js
View file @ 8a351ffa
......@@ -48,7 +48,7 @@ SelectionEngine = function() {
if(cursorsize>0) {
clickedNodes = this.SelectThis2( area )
} else {
clickedNodes = partialGraph._core.graph.nodes.filter(function(n) {
clickedNodes = TW.partialGraph._core.graph.nodes.filter(function(n) {
return !!n['hover'];
}).map(function(n) {
return n.id;
......@@ -122,7 +122,7 @@ SelectionEngine = function() {
if(cursorsize>0) {
targeted = this.SelectThis2( area )
} else {
targeted = partialGraph._core.graph.nodes.filter(function(n) {
targeted = TW.partialGraph._core.graph.nodes.filter(function(n) {
return !!n['hover'];
}).map(function(n) {
return n.id;
......@@ -203,7 +203,7 @@ SelectionEngine = function() {
cancelSelection(false);
MultipleSelection2(targeted);
}
partialGraph.draw();
TW.partialGraph.draw();
$("input#searchinput").val("");
$("input#searchinput").autocomplete( "close" );
......@@ -240,7 +240,7 @@ SelectionEngine = function() {
//Multiple selection
var counter=0;
var actualSel=[];
partialGraph.iterNodes(function(n){
TW.partialGraph.iterNodes(function(n){
if(!n.hidden){
distance = Math.sqrt(
Math.pow((x1-parseInt(n.displayX)),2) +
......@@ -263,7 +263,7 @@ SelectionEngine = function() {
greyEverything();
var typeNow = partialGraph.states.slice(-1)[0].type.map(Number).join("|")
var typeNow = TW.partialGraph.states.slice(-1)[0].type.map(Number).join("|")
console.log ("console.loging the Type:")
console.log (typeNow)
console.log (" - - - - - - ")
......@@ -280,8 +280,8 @@ SelectionEngine = function() {
else ndsids=nodes;
for(var i in ndsids) {
s = ndsids[i];
if(Relations[typeNow] && Relations[typeNow][s] ) {
neigh = Relations[typeNow][s]
if(TW.Relations[typeNow] && TW.Relations[typeNow][s] ) {
neigh = TW.Relations[typeNow][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -300,7 +300,7 @@ SelectionEngine = function() {
for(var i in nodes_2_colour) {
if(i) {
n = partialGraph._core.graph.nodesIndex[i]
n = TW.partialGraph._core.graph.nodesIndex[i]
if(n) {
n.color = n.attr['true_color'];
n.attr['grey'] = 0;
......@@ -312,7 +312,7 @@ SelectionEngine = function() {
}
}
for(var i in edges_2_colour) {
an_edge = partialGraph._core.graph.edgesIndex[i]
an_edge = TW.partialGraph._core.graph.edgesIndex[i]
if(!isUndef(an_edge) && !an_edge.hidden){
an_edge.color = an_edge.attr['true_color'];
an_edge.attr['grey'] = 0;
......@@ -321,13 +321,13 @@ SelectionEngine = function() {
var the_new_sels = Object.keys(selections).map(Number)
partialGraph.states.slice(-1)[0].selections = the_new_sels;
partialGraph.states.slice(-1)[0].setState( { sels: the_new_sels} )
TW.partialGraph.states.slice(-1)[0].selections = the_new_sels;
TW.partialGraph.states.slice(-1)[0].setState( { sels: the_new_sels} )
var neighsDict = {}
if(Relations["1|1"]) {
if(TW.Relations["1|1"]) {
for(var s in the_new_sels) {
var neighs = Relations["1|1"][the_new_sels[s]];
var neighs = TW.Relations["1|1"][the_new_sels[s]];
for(var n in neighs) {
if (!neighsDict[neighs[n]])
neighsDict[neighs[n]] = 0;
......@@ -343,7 +343,7 @@ SelectionEngine = function() {
overNodes=true;
partialGraph.draw();
TW.partialGraph.draw();
updateLeftPanel_fix( selections , oppos );
......@@ -452,7 +452,7 @@ TinaWebJS = function ( sigmacanvas ) {
SelInst.MultipleSelection2({nodes:targeted});
cursor_size = prev_cursor_size;
}
partialGraph.draw();
TW.partialGraph.draw();
$("input#searchinput").val("");
$("input#searchinput").autocomplete( "close" );
......@@ -481,7 +481,7 @@ TinaWebJS = function ( sigmacanvas ) {
cancelSelection(false);
SelInst.MultipleSelection2({nodes:targeted});
}
partialGraph.draw();
TW.partialGraph.draw();
$("input#searchinput").val("");
$("input#searchinput").autocomplete( "close" );
......@@ -743,10 +743,10 @@ TinaWebJS = function ( sigmacanvas ) {
onchange:function(value){
$.doTimeout(100,function (){
partialGraph.iterNodes(function (n) {
if(Nodes[n.id].type==catSoc) {
var newval = parseFloat(Nodes[n.id].size) + parseFloat((value-1))*0.3
if(TW.Nodes[n.id].type==TW.catSoc) {
var newval = parseFloat(TW.Nodes[n.id].size) + parseFloat((value-1))*0.3
n.size = (newval<1.0)?1:newval;
sizeMult[catSoc] = parseFloat(value-1)*0.3;
sizeMult[TW.catSoc] = parseFloat(value-1)*0.3;
}
});
partialGraph.draw();
......@@ -764,10 +764,10 @@ TinaWebJS = function ( sigmacanvas ) {
onchange:function(value){
$.doTimeout(100,function (){
partialGraph.iterNodes(function (n) {
if(Nodes[n.id].type==catSem) {
var newval = parseFloat(Nodes[n.id].size) + parseFloat((value-1))*0.3
if(TW.Nodes[n.id].type==TW.catSem) {
var newval = parseFloat(TW.Nodes[n.id].size) + parseFloat((value-1))*0.3
n.size = (newval<1.0)?1:newval;
sizeMult[catSem] = parseFloat(value-1)*0.3;
sizeMult[TW.catSem] = parseFloat(value-1)*0.3;
}
});
partialGraph.draw();
......
tinawebJS/enviroment.js
View file @ 8a351ffa
//============================ < NEW BUTTONS > =============================//
// Documentation Level: *****
function changeType() {
var present = partialGraph.states.slice(-1)[0]; // Last
var past = partialGraph.states.slice(-2)[0] // avant Last
var lastpos = partialGraph.states.length-1;
var present = TW.partialGraph.states.slice(-1)[0]; // Last
var past = TW.partialGraph.states.slice(-2)[0] // avant Last
var lastpos = TW.partialGraph.states.length-1;
var avantlastpos = lastpos-1;
......@@ -44,16 +46,16 @@ function changeType() {
var prevnodes = {}
var prevedges = {}
for(var i in partialGraph._core.graph.nodesIndex) {
anode = partialGraph._core.graph.nodesIndex[i];
for(var i in TW.partialGraph._core.graph.nodesIndex) {
anode = TW.partialGraph._core.graph.nodesIndex[i];
if(anode) {
prevnodes[i] = true
}
}
var links_sels = {}
for(var i in partialGraph._core.graph.edgesIndex) {
anedge = partialGraph._core.graph.edgesIndex[i];
for(var i in TW.partialGraph._core.graph.edgesIndex) {
anedge = TW.partialGraph._core.graph.edgesIndex[i];
if(anedge) {
prevedges[i] = true;
if(anedge.attr) {
......@@ -64,7 +66,7 @@ function changeType() {
}
}
partialGraph.emptyGraph();
TW.partialGraph.emptyGraph();
var nodes_2_colour = {}
var edges_2_colour = {}
......@@ -73,12 +75,12 @@ function changeType() {
if(present.level) { //If level=Global, fill all {X}-component
for(var n in Nodes) {
if(type_t1[catDict[Nodes[n].type]])
for(var n in TW.Nodes) {
if(type_t1[catDict[TW.Nodes[n].type]])
add1Elem(n)
}
for(var e in Edges) {
if(Edges[e].categ==str_type_t1)
for(var e in TW.Edges) {
if(TW.Edges[e].categ==str_type_t1)
add1Elem(e)
}
} else /* Local level, change to previous or alter component*/ {
......@@ -101,7 +103,7 @@ function changeType() {
if(sumpastcat==1) /* change to alter comp*/ {
for(var i in prevnodes) {
s = i;
neigh = Relations[str_nextState][s]
neigh = TW.Relations[str_nextState][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -112,7 +114,7 @@ function changeType() {
for(var i in nodes_2_colour) {
s = i;
neigh = Relations[str_type_t1][s]
neigh = TW.Relations[str_type_t1][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -164,7 +166,7 @@ function changeType() {
var newsels = {}
for(var i in sels) {
s = sels[i];
neigh = Relations[indexCat][s]
neigh = TW.Relations[indexCat][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -192,7 +194,7 @@ function changeType() {
// Saving all the nodes&edges to be highlighted.
for(var i in sels) {
s = sels[i];
neigh = Relations[str_nextState][s]
neigh = TW.Relations[str_nextState][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -208,7 +210,7 @@ function changeType() {
}
if(sumNextState==2) { // we're moving to bipartite subgraph
for(var i in Edges) {
for(var i in TW.Edges) {
n = i.split(";").map(Number)
if( selDict[ n[0] ] || selDict[ n[1] ] ) {
nodes_2_colour[n[0]]=false;
......@@ -236,36 +238,37 @@ function changeType() {
overNodes=true;
}
partialGraph.states[avantlastpos] = {};
partialGraph.states[avantlastpos].LouvainFait = false;
partialGraph.states[avantlastpos].level = present.level;
partialGraph.states[avantlastpos].selections = selsbackup;
partialGraph.states[avantlastpos].type = present.type;
partialGraph.states[avantlastpos].opposites = present.opposites;
partialGraph.states[avantlastpos].categories = present.categories;//to_del
partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
TW.partialGraph.states[avantlastpos] = {};
TW.partialGraph.states[avantlastpos].LouvainFait = false;
TW.partialGraph.states[avantlastpos].level = present.level;
TW.partialGraph.states[avantlastpos].selections = selsbackup;
TW.partialGraph.states[avantlastpos].type = present.type;
TW.partialGraph.states[avantlastpos].opposites = present.opposites;
TW.partialGraph.states[avantlastpos].categories = present.categories;//to_del
TW.partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
partialGraph.states[lastpos].setState({
TW.partialGraph.states[lastpos].setState({
type: nextState,
level: level,
sels: Object.keys(selections).map(Number),
oppos: []
})
partialGraph.states[lastpos].categories = present.categories;//to_del
partialGraph.states[lastpos].categoriesDict = catDict;//to_del
TW.partialGraph.states[lastpos].categories = present.categories;//to_del
TW.partialGraph.states[lastpos].categoriesDict = catDict;//to_del
fa2enabled=true; partialGraph.zoomTo(partialGraph._core.width / 2, partialGraph._core.height / 2, 0.8).draw();//.startForceAtlas2();
fa2enabled=true; TW.partialGraph.zoomTo(TW.partialGraph._core.width / 2, TW.partialGraph._core.height / 2, 0.8).draw();//.startForceAtlas2();
}
// Documentation Level: *****
function changeLevel() {
var present = partialGraph.states.slice(-1)[0]; // Last
var past = partialGraph.states.slice(-2)[0] // avant Last
var lastpos = partialGraph.states.length-1;
var present = TW.partialGraph.states.slice(-1)[0]; // Last
var past = TW.partialGraph.states.slice(-2)[0] // avant Last
var lastpos = TW.partialGraph.states.length-1;
var avantlastpos = lastpos-1;
var level = present.level;
var sels = present.selections;//[144, 384, 543]//partialGraph.states.selections;
var sels = present.selections;//[144, 384, 543]//TW.partialGraph.states.selections;
var catDict = present.categoriesDict;
var type_t0 = present.type;
......@@ -293,7 +296,7 @@ function changeLevel() {
}
var str_nextState = nextState.map(Number).join("|")
partialGraph.emptyGraph();
TW.partialGraph.emptyGraph();
var voisinage = {}
// Dictionaries of: selection+neighbors
......@@ -301,7 +304,7 @@ function changeLevel() {
var edges_2_colour = {}
for(var i in sels) {
s = sels[i];
neigh = Relations[str_type_t0][s]
neigh = TW.Relations[str_type_t0][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -340,12 +343,12 @@ function changeLevel() {
futurelevel = false;
} else { // [Change to Global] when level=Local(0)
for(var n in Nodes) {
if(type_t0[catDict[Nodes[n].type]])
for(var n in TW.Nodes) {
if(type_t0[catDict[TW.Nodes[n].type]])
add1Elem(n)
}
for(var e in Edges) {
if(Edges[e].categ==str_type_t0)
for(var e in TW.Edges) {
if(TW.Edges[e].categ==str_type_t0)
add1Elem(e)
}
futurelevel = true;
......@@ -364,24 +367,24 @@ function changeLevel() {
overNodes=true;
}
partialGraph.states[avantlastpos] = {};
partialGraph.states[avantlastpos].level = present.level;
partialGraph.states[avantlastpos].selections = present.selections;
partialGraph.states[avantlastpos].type = present.type;
partialGraph.states[avantlastpos].opposites = present.opposites;
partialGraph.states[avantlastpos].categories = present.categories;//to_del
partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
TW.partialGraph.states[avantlastpos] = {};
TW.partialGraph.states[avantlastpos].level = present.level;
TW.partialGraph.states[avantlastpos].selections = present.selections;
TW.partialGraph.states[avantlastpos].type = present.type;
TW.partialGraph.states[avantlastpos].opposites = present.opposites;
TW.partialGraph.states[avantlastpos].categories = present.categories;//to_del
TW.partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
partialGraph.states[lastpos].setState({
TW.partialGraph.states[lastpos].setState({
type: present.type,
level: futurelevel,
sels: Object.keys(selections).map(Number),
oppos: []
})
partialGraph.states[lastpos].categories = present.categories;//to_del
partialGraph.states[lastpos].categoriesDict = catDict;//to_del
TW.partialGraph.states[lastpos].categories = present.categories;//to_del
TW.partialGraph.states[lastpos].categoriesDict = catDict;//to_del
fa2enabled=true; partialGraph.zoomTo(partialGraph._core.width / 2, partialGraph._core.height / 2, 0.8).draw().startForceAtlas2();
fa2enabled=true; TW.partialGraph.zoomTo(TW.partialGraph._core.width / 2, TW.partialGraph._core.height / 2, 0.8).draw().startForceAtlas2();
}
//============================= </ NEW BUTTONS > =============================//
......@@ -407,7 +410,7 @@ function EdgeWeightFilter(sliderDivID , type_attrb , type , criteria) {
// type_attrb = "type"
// criteria = "size"
if(partialGraph._core.graph.edges.length<3) {
if(TW.partialGraph._core.graph.edges.length<3) {
$(sliderDivID).freshslider({
range: true,
step:1,
......@@ -420,7 +423,7 @@ function EdgeWeightFilter(sliderDivID , type_attrb , type , criteria) {
return;
}
var filterparams = AlgorithmForSliders ( Edges , type_attrb , type , criteria) //OK
var filterparams = AlgorithmForSliders ( TW.Edges , type_attrb , type , criteria) //OK
pr("EdgeWeightFilter: "+type)
pr(filterparams)
var steps = filterparams["steps"]
......@@ -443,7 +446,7 @@ function EdgeWeightFilter(sliderDivID , type_attrb , type , criteria) {
pushFilterValue( sliderDivID , lastvalue )
var present = partialGraph.states.slice(-1)[0];
var present = TW.partialGraph.states.slice(-1)[0];
//finished
$(sliderDivID).freshslider({
......@@ -466,7 +469,7 @@ function EdgeWeightFilter(sliderDivID , type_attrb , type , criteria) {
pr("\nprevious value "+lastvalue+" | current value "+filtervalue)
// [ Stopping FA2 ]
partialGraph.stopForceAtlas2();
TW.partialGraph.stopForceAtlas2();
// [ / Stopping FA2 ]
var t0 = lastvalue.split("-")
......@@ -512,18 +515,18 @@ function EdgeWeightFilter(sliderDivID , type_attrb , type , criteria) {
// pr("adding "+ids.join())
for(var id in ids) {
ID = ids[id]
Edges[ID].lock = false;
TW.Edges[ID].lock = false;
if(present.level) {
// pr("\tADD "+ID)
// n = ID.split(";")
// if(n.length>1)
// pr("\t\tsource:("+Nodes[n[0]].x+","+Nodes[n[0]].y+") ||| target:("+Nodes[n[1]].x+","+Nodes[n[1]].y+")")
// pr("\t\tsource:("+TW.Nodes[n[0]].x+","+TW.Nodes[n[0]].y+") ||| target:("+TW.Nodes[n[1]].x+","+TW.Nodes[n[1]].y+")")
add1Elem(ID)
} else {
for (var n in partialGraph._core.graph.nodesIndex) {
sid = Edges[ID].sourceID
tid = Edges[ID].targetID
for (var n in TW.partialGraph._core.graph.nodesIndex) {
sid = TW.Edges[ID].sourceID
tid = TW.Edges[ID].targetID
if (sid==n || tid==n) {
if(isUndef(getn(sid))) unHide(sid)
if(isUndef(getn(tid))) unHide(tid)
......@@ -542,28 +545,28 @@ function EdgeWeightFilter(sliderDivID , type_attrb , type , criteria) {
for(var id in ids) {
ID = ids[id]
if(!isUndef(gete(ID))) {
partialGraph.dropEdge(ID)
Edges[ID].lock = true;
TW.partialGraph.dropEdge(ID)
TW.Edges[ID].lock = true;
// pr("\tDEL "+ID)
// n = ID.split(";")
// if(n.length>1)
// pr("\t\tsource:("+Nodes[n[0]].x+","+Nodes[n[0]].y+") ||| target:("+Nodes[n[1]].x+","+Nodes[n[1]].y+")")
// pr("\t\tsource:("+TW.Nodes[n[0]].x+","+TW.Nodes[n[0]].y+") ||| target:("+TW.Nodes[n[1]].x+","+TW.Nodes[n[1]].y+")")
}
}
}
}
}
partialGraph.refresh()
partialGraph.draw()
TW.partialGraph.refresh()
TW.partialGraph.draw()
// console.log("\t\tedgesfilter:")
// console.log("\t\t[ Starting FA2 ]")
// [ Starting FA2 ]
$.doTimeout(10,function(){
fa2enabled=true; partialGraph.startForceAtlas2();
fa2enabled=true; TW.partialGraph.startForceAtlas2();
// $.doTimeout(10,function(){
// partialGraph.stopForceAtlas2();
// TW.partialGraph.stopForceAtlas2();
// });
});
// [ / Starting FA2 ]
......@@ -597,7 +600,7 @@ function NodeWeightFilter( categories , sliderDivID , type_attrb , type , crit
// type_attrb = "type"
// criteria = "size"
if(partialGraph._core.graph.nodes.length<3) {
if(TW.partialGraph._core.graph.nodes.length<3) {
$(sliderDivID).freshslider({
range: true,
......@@ -612,7 +615,7 @@ function NodeWeightFilter( categories , sliderDivID , type_attrb , type , crit
return;
}
var filterparams = AlgorithmForSliders ( Nodes , type , type_attrb , criteria)
var filterparams = AlgorithmForSliders ( TW.Nodes , type , type_attrb , criteria)
pr("NodeWeightFilter: "+type)
pr(filterparams)
......@@ -649,7 +652,7 @@ function NodeWeightFilter( categories , sliderDivID , type_attrb , type , crit
}
// [ Stopping FA2 ]
partialGraph.stopForceAtlas2();
TW.partialGraph.stopForceAtlas2();
// [ / Stopping FA2 ]
for(var i in finalarray) {
......@@ -657,29 +660,29 @@ function NodeWeightFilter( categories , sliderDivID , type_attrb , type , crit
if(i>=low && i<=high){
for(var id in ids) {
ID = ids[id]
Nodes[ID].lock = false;
if(partialGraph._core.graph.nodesIndex[ID])
partialGraph._core.graph.nodesIndex[ID].hidden = false;
TW.Nodes[ID].lock = false;
if(TW.partialGraph._core.graph.nodesIndex[ID])
TW.partialGraph._core.graph.nodesIndex[ID].hidden = false;
}
} else {
for(var id in ids) {
ID = ids[id]
Nodes[ID].lock = true;
if(partialGraph._core.graph.nodesIndex[ID])
partialGraph._core.graph.nodesIndex[ID].hidden = true;
TW.Nodes[ID].lock = true;
if(TW.partialGraph._core.graph.nodesIndex[ID])
TW.partialGraph._core.graph.nodesIndex[ID].hidden = true;
}
}
}
pushFilterValue(sliderDivID,filtervalue)
partialGraph.refresh()
partialGraph.draw()
TW.partialGraph.refresh()
TW.partialGraph.draw()
// [ Starting FA2 ]
$.doTimeout(10,function(){
fa2enabled=true; partialGraph.startForceAtlas2();
fa2enabled=true; TW.partialGraph.startForceAtlas2();
// $.doTimeout(10,function(){
// partialGraph.stopForceAtlas2();
// TW.partialGraph.stopForceAtlas2();
// });
});
// [ / Starting FA2 ]
......@@ -690,23 +693,20 @@ function NodeWeightFilter( categories , sliderDivID , type_attrb , type , crit
}
function getGraphElement(elem) {
if(elem.split(";").length==1) return partialGraph._core.graph.nodesIndex[elem];
else return partialGraph._core.graph.edgesIndex[elem]
if(elem.split(";").length==1) return TW.partialGraph._core.graph.nodesIndex[elem];
else return TW.partialGraph._core.graph.edgesIndex[elem]
}
// Execution modes:
// AlgorithmForSliders ( partialGraph._core.graph.edges , "label" , "nodes1" , "weight")
// AlgorithmForSliders ( partialGraph._core.graph.edges , "label" , "nodes2" , "weight")
// AlgorithmForSliders ( partialGraph._core.graph.nodes , "type" , "Document" , "size")
// AlgorithmForSliders ( partialGraph._core.graph.nodes , "type" , "NGram" , "size")
// AlgorithmForSliders ( TW.partialGraph._core.graph.edges , "label" , "nodes1" , "weight")
// AlgorithmForSliders ( TW.partialGraph._core.graph.edges , "label" , "nodes2" , "weight")
// AlgorithmForSliders ( TW.partialGraph._core.graph.nodes , "type" , "Document" , "size")
// AlgorithmForSliders ( TW.partialGraph._core.graph.nodes , "type" , "NGram" , "size")
function AlgorithmForSliders( elements , type_attrb , type , criteria) {
// // ( 1 )
// // get visible sigma nodes|edges
if(isUndef(elements)) return {"steps":0 , "finalarray":[]};
var elems = [];/*=elements.filter(function(e) {
return e[type_attrb]==type;
});*/
var elems = [];
for(var e in elements) {
if( elements[e][type_attrb]==type ) {
if(getGraphElement(e)) {
......@@ -714,7 +714,8 @@ function AlgorithmForSliders( elements , type_attrb , type , criteria) {
}
}
}
if(elems.length==0) return {"steps":0 , "finalarray":[]};
if(elems.length==0)
return { "steps":0 , "finalarray":[] };
// identifying if you received nodes or edges
var edgeflag = ( !isNaN(elems.slice(-1)[0].id) || elems.slice(-1)[0].id.split(";").length>1)? true : false;
......@@ -836,7 +837,7 @@ function searchLabel(string){
var id_node = '';
var n;
nds = partialGraph._core.graph.nodes.filter(function(x){return !x["hidden"]});
nds = TW.partialGraph._core.graph.nodes.filter(function(x){return !x["hidden"]});
for(var i in nds){
n = nds[i]
if (n.label == string) {
......
tinawebJS/main.js
View file @ 8a351ffa
......@@ -21,6 +21,7 @@
/\(([\s\S]*?)\)/,
/[$\w]+/g
);
var AjaxSync = (function(TYPE, URL, DATA, CT , DT) {
var Result = []
TYPE = (!TYPE)?"GET":"POST"
......@@ -46,7 +47,7 @@ var AjaxSync = (function(TYPE, URL, DATA, CT , DT) {
}).index();
function getGexfPath(v){
gexfpath=(gexfDictReverse[v])?gexfDictReverse[v]:v;
var gexfpath=(TW.gexfDictReverse[v])?TW.gexfDictReverse[v]:v;
return gexfpath;
}
......@@ -57,30 +58,27 @@ function jsActionOnGexfSelector(gexfLegend){
window.location=window.location.origin+window.location.pathname+"?file="+encodeURIComponent( gexfLegend );
}
var urlfile_override = (isUndef(getUrlParam.file))?false:true;
var files_selector = ""
if(urlfile_override)
mainfile.unshift( getUrlParam.file );
if( !isUndef(getUrlParam.file) )
TW.mainfile.unshift( getUrlParam.file );
unique_mainfile = mainfile.filter(function(item, pos) {
return mainfile.indexOf(item) == pos;
var unique_mainfile = TW.mainfile.filter(function(item, pos) {
return TW.mainfile.indexOf(item) == pos;
});
mainfile = unique_mainfile;
TW.mainfile = unique_mainfile;
console.log("THE URL.FILE PARAM:")
console.log(mainfile)
console.log(TW.mainfile)
files_selector += '<select onchange="jsActionOnGexfSelector(this.value);">'
for(var i in mainfile) {
var gotoURL = window.location.origin+window.location.pathname+"?file="+mainfile[i];
files_selector += '<option>'+mainfile[i]+'</option>'
for(var i in TW.mainfile) {
var gotoURL = window.location.origin+window.location.pathname+"?file="+TW.mainfile[i];
files_selector += '<option>'+TW.mainfile[i]+'</option>'
}
files_selector += "</select>"
$("#network").html(files_selector)
var file = (Array.isArray(mainfile))?mainfile[0]:mainfile;
var file = (Array.isArray(TW.mainfile))?TW.mainfile[0]:TW.mainfile;
var RES = AjaxSync({ URL: file });
......@@ -91,7 +89,7 @@ if(RES["OK"]) {
if(file=="db.json") {
getAdditionalInfo = true;
TW.getAdditionalInfo = true;
fileparam = file;
......@@ -103,8 +101,8 @@ if(RES["OK"]) {
for(var gexf in the_gexfs) {
pr("\t\t\t"+gexf)
pr("\t\t\t\t"+ the_gexfs[gexf]["semantic"]["table"] )
field[path+"/"+gexf] = the_gexfs[gexf]["semantic"]["table"]
gexfDict[path+"/"+gexf] = "A "+gexf
TW.field[path+"/"+gexf] = the_gexfs[gexf]["semantic"]["table"]
TW.gexfDict[path+"/"+gexf] = "A "+gexf
getUrlParam.file = path+"/"+gexf
break
}
......@@ -112,8 +110,8 @@ if(RES["OK"]) {
}
pr("\n============================\n")
pr(field)
pr(gexfDict)
pr(TW.field)
pr(TW.gexfDict)
var sub_RES = AjaxSync({ URL: getUrlParam.file });
the_data = sub_RES["data"]
fileparam = sub_RES["format"]
......@@ -139,23 +137,23 @@ if(RES["OK"]) {
var possibleStates = makeSystemStates( categories )
var initialState = buildInitialState( categories ) //[true,false]//
dicts = start.makeDicts(categories);
Nodes = dicts.nodes;
Edges = dicts.edges;
if (the_data.clusters) Clusters = the_data.clusters
var dicts = start.makeDicts(categories);
TW.Nodes = dicts.nodes;
TW.Edges = dicts.edges;
if (the_data.clusters) TW.Clusters = the_data.clusters
nodes1 = dicts.n1;//not used
TW.nodes1 = dicts.n1;//not used
var catDict = dicts.catDict
pr("CategoriesDict: ")
pr(catDict)
categoriesIndex = categories;//to_remove
catSoc = categories[0];//to_remove
catSem = (categories[1])?categories[1]:false;//to_remove
TW.categoriesIndex = categories;//to_remove
TW.catSoc = categories[0];//to_remove
TW.catSem = (categories[1])?categories[1]:false;//to_remove
for(var i in categories) {
Filters[i] = {}
Filters[i]["#slidercat"+i+"edgesweight"] = true;
TW.Filters[i] = {}
TW.Filters[i]["#slidercat"+i+"edgesweight"] = true;
}
// [ Initiating Sigma-Canvas ]
......@@ -169,21 +167,21 @@ if(RES["OK"]) {
// [ Poblating the Sigma-Graph ]
var sigma_utils = new SigmaUtils();
partialGraph = sigma.init(document.getElementById('sigma-example'))
TW.partialGraph = sigma.init(document.getElementById('sigma-example'))
.drawingProperties(sigmaJsDrawingProperties)
.graphProperties(sigmaJsGraphProperties)
.mouseProperties(sigmaJsMouseProperties);
partialGraph = sigma_utils.FillGraph( initialState , catDict , dicts.nodes , dicts.edges , partialGraph );
partialGraph.states = []
partialGraph.states[0] = false;
partialGraph.states[1] = SystemStates;
partialGraph.states[1].categories = categories
partialGraph.states[1].categoriesDict = catDict;
partialGraph.states[1].type = initialState;
partialGraph.states[1].LouvainFait = false;
TW.partialGraph = sigma_utils.FillGraph( initialState , catDict , dicts.nodes , dicts.edges , TW.partialGraph );
TW.partialGraph.states = []
TW.partialGraph.states[0] = false;
TW.partialGraph.states[1] = TW.SystemStates;
TW.partialGraph.states[1].categories = categories
TW.partialGraph.states[1].categoriesDict = catDict;
TW.partialGraph.states[1].type = initialState;
TW.partialGraph.states[1].LouvainFait = false;
// [ / Poblating the Sigma-Graph ]
partialGraph.states[1].setState = (function( type , level , sels , oppos ) {
TW.partialGraph.states[1].setState = (function( type , level , sels , oppos ) {
var bistate=false, typestring=false;
console.log("IN THE SET STATE METHOD:")
if(!isUndef(type)) {
......@@ -207,8 +205,8 @@ if(RES["OK"]) {
console.log("opposites: ");
console.log(oppos)
var present = partialGraph.states.slice(-1)[0]; // Last
var past = partialGraph.states.slice(-2)[0] // avant Last
var present = TW.partialGraph.states.slice(-1)[0]; // Last
var past = TW.partialGraph.states.slice(-2)[0] // avant Last
console.log("previous level: "+past.level)
console.log("new level: "+present.level)
......@@ -224,7 +222,7 @@ if(RES["OK"]) {
LevelButtonDisable(true)
// console.log("printing the first state:")
// first_state = partialGraph.states.slice(-1)[0].type;
// first_state = TW.partialGraph.states.slice(-1)[0].type;
// for(var i in first_state) {
// if(first_state[i]) {
// for(var j in Filters[i])
......@@ -279,14 +277,14 @@ if(RES["OK"]) {
bgcolor:"#FFA500",
onchange:function(value){
$.doTimeout(100,function (){
partialGraph.iterNodes(function (n) {
if(Nodes[n.id].type==catSem) {
var newval = parseFloat(Nodes[n.id].size) + parseFloat((value-1))*0.3
TW.partialGraph.iterNodes(function (n) {
if(TW.Nodes[n.id].type==TW.catSem) {
var newval = parseFloat(TW.Nodes[n.id].size) + parseFloat((value-1))*0.3
n.size = (newval<1.0)?1:newval;
sizeMult[catSem] = parseFloat(value-1)*0.3;
sizeMult[TW.catSem] = parseFloat(value-1)*0.3;
}
});
partialGraph.draw();
TW.partialGraph.draw();
});
}
});
......@@ -305,17 +303,17 @@ if(RES["OK"]) {
}
}).index();
partialGraph.zoomTo(partialGraph._core.width / 2, partialGraph._core.height / 2, 0.8).draw();
TW.partialGraph.zoomTo(TW.partialGraph._core.width / 2, TW.partialGraph._core.height / 2, 0.8).draw();
// fa2enabled=true; partialGraph.zoomTo(partialGraph._core.width / 2, partialGraph._core.height / 2, 0.8).draw();
// fa2enabled=true; TW.partialGraph.zoomTo(TW.partialGraph._core.width / 2, TW.partialGraph._core.height / 2, 0.8).draw();
// $.doTimeout(1,function(){
// fa2enabled=true; partialGraph.startForceAtlas2();
// fa2enabled=true; TW.partialGraph.startForceAtlas2();
// $.doTimeout(10,function(){
// partialGraph.stopForceAtlas2();
// TW.partialGraph.stopForceAtlas2();
// });
// });
twjs_.initListeners( categories , partialGraph);
twjs_.initListeners( categories , TW.partialGraph);
if( categories.length==1 ) {
$("#changetype").hide();
......
tinawebJS/methods.js
View file @ 8a351ffa
......@@ -7,21 +7,21 @@ function cancelSelection (fromTagCloud) {
selections = [];
//selections.length = 0;
selections.splice(0, selections.length);
partialGraph.refresh();
TW.partialGraph.refresh();
partialGraph.states.slice(-1)[0].selections=[]
TW.partialGraph.states.slice(-1)[0].selections=[]
//Nodes colors go back to normal
overNodes=false;
e = partialGraph._core.graph.edges;
e = TW.partialGraph._core.graph.edges;
for(i=0;i<e.length;i++){
e[i].color = e[i].attr['grey'] ? e[i].attr['true_color'] : e[i].color;
e[i].attr['grey'] = 0;
}
partialGraph.draw(2,1,2);
TW.partialGraph.draw(2,1,2);
partialGraph.iterNodes(function(n){
TW.partialGraph.iterNodes(function(n){
n.active=false;
n.color = n.attr['grey'] ? n.attr['true_color'] : n.color;
n.attr['grey'] = 0;
......@@ -39,33 +39,33 @@ function cancelSelection (fromTagCloud) {
$("#tips").html(getTips());
}
for(var i in deselections){
if( !isUndef(partialGraph._core.graph.nodesIndex[i]) ) {
partialGraph._core.graph.nodesIndex[i].forceLabel=false;
partialGraph._core.graph.nodesIndex[i].neighbour=false;
if( !isUndef(TW.partialGraph._core.graph.nodesIndex[i]) ) {
TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
TW.partialGraph._core.graph.nodesIndex[i].neighbour=false;
}
}
deselections={};
// leftPanel("close");
if(partialGraph.states.slice(-1)[0].level)
if(TW.partialGraph.states.slice(-1)[0].level)
LevelButtonDisable(true);
partialGraph.draw();
TW.partialGraph.draw();
}
function highlightSelectedNodes(flag){
pr("\t***methods.js:highlightSelectedNodes(flag)"+flag+" selEmpty:"+is_empty(selections))
if(!is_empty(selections)){
for(var i in selections) {
if(Nodes[i].type==catSoc && swclickActual=="social"){
node = partialGraph._core.graph.nodesIndex[i];
if(TW.Nodes[i].type==TW.catSoc && swclickActual=="social"){
node = TW.partialGraph._core.graph.nodesIndex[i];
node.active = flag;
}
else if(Nodes[i].type==catSem && swclickActual=="semantic") {
node = partialGraph._core.graph.nodesIndex[i];
else if(TW.Nodes[i].type==TW.catSem && swclickActual=="semantic") {
node = TW.partialGraph._core.graph.nodesIndex[i];
node.active = flag;
}
else if(swclickActual=="sociosemantic") {
node = partialGraph._core.graph.nodesIndex[i];
node = TW.partialGraph._core.graph.nodesIndex[i];
node.active = flag;
}
else break;
......@@ -114,7 +114,7 @@ function RefreshState(newNOW){
// N : number of nodes
// k : number of ( selected nodes + their neighbors )
// s : number of selections
var N=( Object.keys(Nodes).filter(function(n){return Nodes[n].type==catSoc}) ).length
var N=( Object.keys(TW.Nodes).filter(function(n){return TW.Nodes[n].type==TW.catSoc}) ).length
var k=Object.keys(getNeighs(Object.keys(selections),nodes1)).length
var s=Object.keys(selections).length
pr("in social N: "+N+" - k: "+k+" - s: "+s)
......@@ -135,7 +135,7 @@ function RefreshState(newNOW){
}
if(NOW=="B" || NOW=="b") {
var N=( Object.keys(Nodes).filter(function(n){return Nodes[n].type==catSem}) ).length
var N=( Object.keys(TW.Nodes).filter(function(n){return TW.Nodes[n].type==TW.catSem}) ).length
var k=Object.keys(getNeighs(Object.keys(selections),nodes2)).length
var s=Object.keys(selections).length
pr("in semantic N: "+N+" - k: "+k+" - s: "+s)
......@@ -169,7 +169,7 @@ function RefreshState(newNOW){
$("#category-B").show();
}
partialGraph.draw();
TW.partialGraph.draw();
}
......@@ -194,10 +194,10 @@ function htmlfied_alternodes(elems) {
(frec-1)*
((desirableTagCloudFont_MAX-desirableTagCloudFont_MIN)/(frecMAX-1));
}
if(!isUndef(Nodes[id])){
if(!isUndef(TW.Nodes[id])){
// js1 js2
// onclick="graphTagCloudElem(' ');
htmlfied_alternode = '<span class="tagcloud-item" style="font-size:'+fontSize+'px;" '+js1+id+js2+'>'+ Nodes[id].label+ '</span>';
htmlfied_alternode = '<span class="tagcloud-item" style="font-size:'+fontSize+'px;" '+js1+id+js2+'>'+ TW.Nodes[id].label+ '</span>';
oppositesNodes.push(htmlfied_alternode)
}
}
......@@ -206,8 +206,8 @@ function htmlfied_alternodes(elems) {
function manualForceLabel(nodeid,active) {
// pr("manual|"+nodeid+"|"+active)
partialGraph._core.graph.nodesIndex[nodeid].active=active;
partialGraph.draw();
TW.partialGraph._core.graph.nodesIndex[nodeid].active=active;
TW.partialGraph.draw();
}
function htmlfied_samenodes(elems) {
......@@ -236,9 +236,9 @@ function htmlfied_nodesatts(elems){
information=[]
var id=elems[i]
var node = Nodes[id]
var node = TW.Nodes[id]
if (mainfile) {
if (TW.mainfile) {
var addname = (node.attributes["name"])?node.attributes["name"]:"";
google='<a target="_blank" href="http://www.google.com/search?q='+addname+"+"+node.label.replace(" ","+")+'">';
information += '<li><b>'+ google + node.label + '</a></b></li>';
......@@ -248,7 +248,7 @@ function htmlfied_nodesatts(elems){
}
socnodes.push(information);
} else {
if(node.type==catSoc){
if(node.type==TW.catSoc){
information += '<li><b>' + node.label + '</b></li>';
if(node.htmlCont==""){
if (!isUndef(node.level)) {
......@@ -260,7 +260,7 @@ function htmlfied_nodesatts(elems){
socnodes.push(information)
}
if(node.type==catSem){
if(node.type==TW.catSem){
information += '<li><b>' + node.label + '</b></li>';
google='<a href=http://www.google.com/#hl=en&source=hp&q=%20'+node.label.replace(" ","+")+'%20><img src="'+'img/google.png"></img></a>';
wiki = '<a href=http://en.wikipedia.org/wiki/'+node.label.replace(" ","_")+'><img src="'+'img/wikipedia.png"></img></a>';
......@@ -318,7 +318,7 @@ function updateLeftPanel_fix( sels , oppos ) {
$("#information").html(informationDIV);
$("#tips").html("");
if(categoriesIndex.length==1) getTopPapers("semantic");
if(TW.categoriesIndex.length==1) getTopPapers("semantic");
else getTopPapers(swclickActual);
}
......@@ -345,7 +345,7 @@ function LevelButtonDisable( TF ){
function graphTagCloudElem(nodes) {
pr("in graphTagCloudElem, nodae_id: "+nodes);
cancelSelection();
partialGraph.emptyGraph();
TW.partialGraph.emptyGraph();
var ndsids=[]
......@@ -356,18 +356,18 @@ function graphTagCloudElem(nodes) {
node_id = ndsids[0]
var catDict = partialGraph.states.slice(-1)[0].categoriesDict;
var type = Nodes[node_id].type;
var catDict = TW.partialGraph.states.slice(-1)[0].categoriesDict;
var type = TW.Nodes[node_id].type;
var next_state = [];
for(var c in catDict)
next_state.push( c==type )
var str_nextstate = next_state.map(Number).join("|")
var present = partialGraph.states.slice(-1)[0]; // Last
var present = TW.partialGraph.states.slice(-1)[0]; // Last
var level = present.level;
var sels = [node_id];//[144, 384, 543]//partialGraph.states.selections;Last
var lastpos = partialGraph.states.length-1;
var sels = [node_id];//[144, 384, 543]//TW.partialGraph.states.selections;Last
var lastpos = TW.partialGraph.states.length-1;
var avantlastpos = lastpos-1;
// Dictionaries of: selection+neighbors
......@@ -376,7 +376,7 @@ function graphTagCloudElem(nodes) {
var voisinage = {}
for(var i in sels) {
s = sels[i];
neigh = Relations[str_nextstate][s]
neigh = TW.Relations[str_nextstate][s]
if(neigh) {
for(var j in neigh) {
t = neigh[j]
......@@ -424,33 +424,33 @@ function graphTagCloudElem(nodes) {
overNodes=true;
}
partialGraph.states[avantlastpos] = {};
partialGraph.states[avantlastpos].level = present.level;
partialGraph.states[avantlastpos].selections = present.selections;
partialGraph.states[avantlastpos].type = present.type;
partialGraph.states[avantlastpos].opposites = present.opposites;
partialGraph.states[avantlastpos].categories = present.categories;//to_del
partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
TW.partialGraph.states[avantlastpos] = {};
TW.partialGraph.states[avantlastpos].level = present.level;
TW.partialGraph.states[avantlastpos].selections = present.selections;
TW.partialGraph.states[avantlastpos].type = present.type;
TW.partialGraph.states[avantlastpos].opposites = present.opposites;
TW.partialGraph.states[avantlastpos].categories = present.categories;//to_del
TW.partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
partialGraph.states[lastpos].setState({
TW.partialGraph.states[lastpos].setState({
type: next_state,
level: futurelevel,
sels: Object.keys(selections).map(Number),
oppos: []
})
partialGraph.states[lastpos].categories = present.categories;//to_del
partialGraph.states[lastpos].categoriesDict = catDict;//to_del
TW.partialGraph.states[lastpos].categories = present.categories;//to_del
TW.partialGraph.states[lastpos].categoriesDict = catDict;//to_del
fa2enabled=true; partialGraph.zoomTo(partialGraph._core.width / 2, partialGraph._core.height / 2, 0.8).draw().startForceAtlas2();
fa2enabled=true; TW.partialGraph.zoomTo(TW.partialGraph._core.width / 2, TW.partialGraph._core.height / 2, 0.8).draw().startForceAtlas2();
ChangeGraphAppearanceByAtt(true)
}
function greyEverything(){
nds = partialGraph._core.graph.nodes.filter(function(n) {
nds = TW.partialGraph._core.graph.nodes.filter(function(n) {
return !n['hidden'];
});
for(var i in nds){
......@@ -462,7 +462,7 @@ function greyEverything(){
nds[i].attr['grey'] = 1;
}
eds = partialGraph._core.graph.edges.filter(function(e) {
eds = TW.partialGraph._core.graph.edges.filter(function(e) {
return !e['hidden'];
});
for(var i in eds){
......@@ -475,10 +475,10 @@ function greyEverything(){
}
function graphResetColor(){
nds = partialGraph._core.graph.nodes.filter(function(x) {
nds = TW.partialGraph._core.graph.nodes.filter(function(x) {
return !x['hidden'];
});
eds = partialGraph._core.graph.edges.filter(function(x) {
eds = TW.partialGraph._core.graph.edges.filter(function(x) {
return !x['hidden'];
});
......@@ -498,11 +498,11 @@ function graphResetColor(){
function hideEverything(){
pr("\thiding all");
nodeslength=0;
for(var n in partialGraph._core.graph.nodesIndex){
partialGraph._core.graph.nodesIndex[n].hidden=true;
for(var n in TW.partialGraph._core.graph.nodesIndex){
TW.partialGraph._core.graph.nodesIndex[n].hidden=true;
}
for(var e in partialGraph._core.graph.edgesIndex){
partialGraph._core.graph.edgesIndex[e].hidden=true;
for(var e in TW.partialGraph._core.graph.edgesIndex){
TW.partialGraph._core.graph.edgesIndex[e].hidden=true;
}
overNodes=false;//magic line!
pr("\tall hidded");
......@@ -517,43 +517,43 @@ function add1Elem(id) {
id = parseInt(id)
if(!isUndef(getn(id))) return;
if(Nodes[id]) {
if(TW.Nodes[id]) {
var anode = {}
anode.id=id;
anode.label=Nodes[id].label;
anode.size=Nodes[id].size;
anode.x=Nodes[id].x;
anode.y=Nodes[id].y;
anode.hidden=(Nodes[id].lock)?true:false;
anode.type=Nodes[id].type;
anode.color=Nodes[id].color;
if( Nodes[id].shape ) anode.shape = Nodes[id].shape;
anode.label=TW.Nodes[id].label;
anode.size=TW.Nodes[id].size;
anode.x=TW.Nodes[id].x;
anode.y=TW.Nodes[id].y;
anode.hidden=(TW.Nodes[id].lock)?true:false;
anode.type=TW.Nodes[id].type;
anode.color=TW.Nodes[id].color;
if( TW.Nodes[id].shape ) anode.shape = TW.Nodes[id].shape;
if(Number(anode.id)==287) console.log("coordinates of node 287: ( "+anode.x+" , "+anode.y+" ) ")
if(!Nodes[id].lock) {
updateSearchLabels(id,Nodes[id].label,Nodes[id].type);
if(!TW.Nodes[id].lock) {
updateSearchLabels(id,TW.Nodes[id].label,TW.Nodes[id].type);
nodeslength++;
}
partialGraph.addNode(id,anode);
TW.partialGraph.addNode(id,anode);
return;
}
} else { // It's an edge!
if(!isUndef(gete(id))) return;
if(Edges[id] && !Edges[id].lock){
// var present = partialGraph.states.slice(-1)[0];
if(TW.Edges[id] && !TW.Edges[id].lock){
// var present = TW.partialGraph.states.slice(-1)[0];
var anedge = {
id: id,
sourceID: Edges[id].source,
targetID: Edges[id].target,
sourceID: TW.Edges[id].source,
targetID: TW.Edges[id].target,
lock : false,
label: Edges[id].label,
type: Edges[id].type,
categ: Edges[id].categ,
weight: Edges[id].weight
label: TW.Edges[id].label,
type: TW.Edges[id].type,
categ: TW.Edges[id].categ,
weight: TW.Edges[id].weight
};
partialGraph.addEdge(id , anedge.sourceID , anedge.targetID , anedge);
TW.partialGraph.addEdge(id , anedge.sourceID , anedge.targetID , anedge);
return;
}
}
......@@ -614,7 +614,7 @@ function saveGEXF(nodes,edges,atts){
}
gexf += ' <attvalues>\n';
gexf += ' <attvalue for="0" value="'+nodes[n].type+'"/>\n';
gexf += ' <attvalue for="1" value="'+Nodes[nodes[n].id].CC+'"/>\n';
gexf += ' <attvalue for="1" value="'+TW.Nodes[nodes[n].id].CC+'"/>\n';
gexf += ' </attvalues>\n';
gexf += '</node>\n';
}
......@@ -636,17 +636,17 @@ function saveGraphIMG(){
var strDownloadMime = "image/octet-stream"
var nodesDiv = partialGraph._core.domElements.nodes;
var nodesDiv = TW.partialGraph._core.domElements.nodes;
var nodesCtx = nodesDiv.getContext("2d");
var edgesDiv = partialGraph._core.domElements.edges;
var edgesDiv = TW.partialGraph._core.domElements.edges;
var edgesCtx = edgesDiv.getContext("2d");
var hoverDiv = partialGraph._core.domElements.hover;
var hoverDiv = TW.partialGraph._core.domElements.hover;
var hoverCtx = hoverDiv.getContext("2d");
var labelsDiv = partialGraph._core.domElements.labels;
var labelsDiv = TW.partialGraph._core.domElements.labels;
var labelsCtx = labelsDiv.getContext("2d");
nodesCtx.drawImage(hoverDiv,0,0);
......
tinawebJS/sigma.forceatlas2.js
View file @ 8a351ffa
......@@ -341,7 +341,7 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
var swingingVSnodes_length = swingingSum/nodes.length; /**/
if(stopcriteria && (convg > swingingVSnodes_length)){
pr("i've applied the stopcriteria: "+self.count)
partialGraph.stopForceAtlas2();
TW.partialGraph.stopForceAtlas2();
}
self.p.totalEffectiveTraction = totalEffectiveTraction;
......@@ -1128,7 +1128,7 @@ sigma.publicPrototype.startForceAtlas2 = function() {
}
if(isolatedBCauseFilter==ene) {
partialGraph.stopForceAtlas2();
TW.partialGraph.stopForceAtlas2();
return;
}
......@@ -1139,12 +1139,12 @@ sigma.publicPrototype.startForceAtlas2 = function() {
return true;
});
var present = partialGraph.states.slice(-1)[0]
var present = TW.partialGraph.states.slice(-1)[0]
// fixing anomaly in forceatlas2
$.doTimeout(250,function (){
if( !present.level && partialGraph.forceatlas2.active && partialGraph.forceatlas2.count==0) {
if( !present.level && TW.partialGraph.forceatlas2.active && TW.partialGraph.forceatlas2.count==0) {
pr("SUPER JUTSU!!")
partialGraph.startForceAtlas2();
TW.partialGraph.startForceAtlas2();
return;
}
});
......@@ -1153,7 +1153,7 @@ sigma.publicPrototype.startForceAtlas2 = function() {
};
sigma.publicPrototype.stopForceAtlas2 = function() {
var present = partialGraph.states.slice(-1)[0]
var present = TW.partialGraph.states.slice(-1)[0]
if(this.forceatlas2) {
if(this.forceatlas2.count) {
pr("\t\t\t\t\tFA2 Stopped: "+this.forceatlas2.count)
......@@ -1162,14 +1162,14 @@ sigma.publicPrototype.stopForceAtlas2 = function() {
first_state = present.type;
for(var i in first_state) {
if(first_state[i]) {
for(var j in Filters[i]) {
for(var j in TW.Filters[i]) {
original = lastFilter[j]["orig"]
thelast = lastFilter[j]["last"]
if(thelast!="-") {
if(original==thelast) {
for(var i in partialGraph._core.graph.nodesIndex){
Nodes[i].x = partialGraph._core.graph.nodesIndex[i].x;
Nodes[i].y = partialGraph._core.graph.nodesIndex[i].y;
for(var i in TW.partialGraph._core.graph.nodesIndex){
TW.Nodes[i].x = TW.partialGraph._core.graph.nodesIndex[i].x;
TW.Nodes[i].y = TW.partialGraph._core.graph.nodesIndex[i].y;
}
}
}
......@@ -1182,15 +1182,14 @@ sigma.publicPrototype.stopForceAtlas2 = function() {
this.forceatlas2.count=0;
}
this.removeGenerator('forceatlas2');
partialGraph.refresh();
if(minimap) $("#overviewzone").show();
TW.partialGraph.refresh();
if(first_time) {
$.doTimeout(100,function (){
pr("\t\t\t\t\tFirst time FA2 Stopped")
for(var i in partialGraph._core.graph.nodesIndex){
Nodes[i].x = partialGraph._core.graph.nodesIndex[i].x;
Nodes[i].y = partialGraph._core.graph.nodesIndex[i].y;
for(var i in TW.partialGraph._core.graph.nodesIndex){
TW.Nodes[i].x = TW.partialGraph._core.graph.nodesIndex[i].x;
TW.Nodes[i].y = TW.partialGraph._core.graph.nodesIndex[i].y;
}
});
first_time=false;
......
tinawebJS/sigma.min.js
View file @ 8a351ffa
......@@ -1273,9 +1273,9 @@ sigma.classes.Cascade = function() {
*/
function empty() {
if(partialGraph) {
if(partialGraph.forceatlas2) {
partialGraph.stopForceAtlas2();
if(TW.partialGraph) {
if(TW.partialGraph.forceatlas2) {
TW.partialGraph.stopForceAtlas2();
}
}
......@@ -2910,8 +2910,8 @@ sigma.classes.Cascade = function() {
self.p.zoomMultiply :
1 / self.p.zoomMultiply)
);
partialGraph.centreX = (self.mouseX*(overviewWidth/(partialGraph._core.width-1)));
partialGraph.centreY = (self.mouseY*(overviewHeight/(partialGraph._core.height-1)));
TW.partialGraph.centreX = (self.mouseX*(overviewWidth/(TW.partialGraph._core.width-1)));
TW.partialGraph.centreY = (self.mouseY*(overviewHeight/(TW.partialGraph._core.height-1)));
if (self.p['blockScroll']) {
if (event.preventDefault) {
......
tinawebJS/sigma.parseCustom.js
View file @ 8a351ffa
......@@ -292,13 +292,13 @@ function dictfyGexf( gexf , categories ){
}
var attention = false
if( Clusters.length == 0 ) {
if( TW.Clusters.length == 0 ) {
if( nodes[1].attributes["cluster_index"] ) {
attention = true;
}
}
Clusters = {}
TW.Clusters = {}
//New scale for node size: now, between 2 and 5 instead [1,70]
for(var it in nodes){
nodes[it].size = desirableNodeSizeMIN+ (parseInt(nodes[it].size)-1)*((desirableNodeSizeMAX-desirableNodeSizeMIN) / (maxNodeSize-minNodeSize));
......@@ -307,13 +307,13 @@ function dictfyGexf( gexf , categories ){
var t_cnumber = nodes[it].attributes["cluster_index"]
nodes[it].attributes["clust_default"] = t_cnumber;
var t_label = (nodes[it].attributes["cluster_label"])?nodes[it].attributes["cluster_label"]:"cluster_"+nodes[it].attributes["cluster_index"]
if(!Clusters[t_type]) {
Clusters[t_type] = {}
Clusters[t_type]["clust_default"] = {}
if(!TW.Clusters[t_type]) {
TW.Clusters[t_type] = {}
TW.Clusters[t_type]["clust_default"] = {}
}
Clusters[t_type]["clust_default"][t_cnumber] = t_label
TW.Clusters[t_type]["clust_default"][t_cnumber] = t_label
}
// partialGraph._core.graph.nodesIndex[it].size=Nodes[it].size;
// TW.partialGraph._core.graph.nodesIndex[it].size=Nodes[it].size;
}
......@@ -373,12 +373,12 @@ function dictfyGexf( gexf , categories ){
}
idArray = idInRelations.map(Number).join("|")
edge.categ = idArray;
if(!Relations[idArray]) Relations[idArray] = {}
if(!TW.Relations[idArray]) TW.Relations[idArray] = {}
if(isUndef(Relations[idArray][source])) Relations[idArray][source] = {};
if(isUndef(Relations[idArray][target])) Relations[idArray][target] = {};
Relations[idArray][source][target]=true;
Relations[idArray][target][source]=true;
if(isUndef(TW.Relations[idArray][source])) TW.Relations[idArray][source] = {};
if(isUndef(TW.Relations[idArray][target])) TW.Relations[idArray][target] = {};
TW.Relations[idArray][source][target]=true;
TW.Relations[idArray][target][source]=true;
// [ / New Code! ]
......@@ -400,7 +400,7 @@ function dictfyGexf( gexf , categories ){
}
nodes1[source].neighbours.push(target);
nodes1[target].neighbours.push(source);
// partialGraph.addEdge(indice,source,target,edge);
// TW.partialGraph.addEdge(indice,source,target,edge);
}
if(categories.length>1) {
......@@ -482,9 +482,9 @@ function dictfyGexf( gexf , categories ){
}
}
for(var i in Relations) {
for(var j in Relations[i]) {
Relations[i][j] = Object.keys(Relations[i][j]).map(Number)
for(var i in TW.Relations) {
for(var j in TW.Relations[i]) {
TW.Relations[i][j] = Object.keys(TW.Relations[i][j]).map(Number)
}
}
......@@ -617,12 +617,12 @@ function dictfyJSON( data , categories ) {
}
idArray = idInRelations.map(Number).join("|")
edge.categ = idArray;
if(!Relations[idArray]) Relations[idArray] = {}
if(!TW.Relations[idArray]) TW.Relations[idArray] = {}
if(isUndef(Relations[idArray][source])) Relations[idArray][source] = {};
if(isUndef(Relations[idArray][target])) Relations[idArray][target] = {};
Relations[idArray][source][target]=true;
Relations[idArray][target][source]=true;
if(isUndef(TW.Relations[idArray][source])) TW.Relations[idArray][source] = {};
if(isUndef(TW.Relations[idArray][target])) TW.Relations[idArray][target] = {};
TW.Relations[idArray][source][target]=true;
TW.Relations[idArray][target][source]=true;
// [ / New Code! ]
......@@ -720,9 +720,9 @@ function dictfyJSON( data , categories ) {
}
}
for(var i in Relations) {
for(var j in Relations[i]) {
Relations[i][j] = Object.keys(Relations[i][j]).map(Number)
for(var i in TW.Relations) {
for(var j in TW.Relations[i]) {
TW.Relations[i][j] = Object.keys(TW.Relations[i][j]).map(Number)
}
}
......
tinawebJS/sigmaUtils.js
View file @ 8a351ffa
......@@ -33,11 +33,11 @@ SigmaUtils = function () {
var typeNow = initialState.map(Number).join("|")
for(var i in Relations[typeNow]) {
for(var i in TW.Relations[typeNow]) {
s = i;
for(var j in Relations[typeNow][i]) {
t = Relations[typeNow][i][j]
e = Edges[s+";"+t]
for(var j in TW.Relations[typeNow][i]) {
t = TW.Relations[typeNow][i][j]
e = TW.Edges[s+";"+t]
if(e) {
if(e.source != e.target) {
var edge = ({
......@@ -69,7 +69,7 @@ function showMeSomeLabels(N){
maxIn=0,
minOut=50,
maxOut=0;
partialGraph.iterNodes(function(n){
TW.partialGraph.iterNodes(function(n){
if(n.hidden==false){
if(parseInt(n.inDegree) < minIn) minIn= n.inDegree;
if(parseInt(n.inDegree) > maxIn) maxIn= n.inDegree;
......@@ -100,51 +100,51 @@ function showMeSomeLabels(N){
if(counter==N) break;
}
}
partialGraph.draw()
TW.partialGraph.draw()
/*======= Show some labels at the beginning =======*/
}
function getnodes(){
return partialGraph._core.graph.nodes;
return TW.partialGraph._core.graph.nodes;
}
function getnodesIndex(){
return partialGraph._core.graph.nodesIndex;
return TW.partialGraph._core.graph.nodesIndex;
}
function getedges(){
return partialGraph._core.graph.edges;
return TW.partialGraph._core.graph.edges;
}
function getedgesIndex(){
return partialGraph._core.graph.edgesIndex;
return TW.partialGraph._core.graph.edgesIndex;
}
function getVisibleEdges() {
return partialGraph._core.graph.edges.filter(function(e) {
return TW.partialGraph._core.graph.edges.filter(function(e) {
return !e['hidden'];
});
}
function getVisibleNodes() {
return partialGraph._core.graph.nodes.filter(function(n) {
return TW.partialGraph._core.graph.nodes.filter(function(n) {
return !n['hidden'];
});
}
function getNodesByAtt(att) {
return partialGraph._core.graph.nodes.filter(function(n) {
return TW.partialGraph._core.graph.nodes.filter(function(n) {
return n['type']==att;
});
}
function getn(id){
return partialGraph._core.graph.nodesIndex[id];
return TW.partialGraph._core.graph.nodesIndex[id];
}
function gete(id){
return partialGraph._core.graph.edgesIndex[id];
return TW.partialGraph._core.graph.edgesIndex[id];
}
......@@ -182,7 +182,7 @@ function getNodeLabels(elems){
var labelss=[]
for(var i in elems){
var id=(!isUndef(elems[i].key))?elems[i].key:i
labelss.push(Nodes[id].label)
labelss.push(TW.Nodes[id].label)
}
return labelss
}
......@@ -195,7 +195,7 @@ function getNodeIDs(elems){
function getSelections(){
params=[];
for(var i in selections){
params.push(Nodes[i].label);
params.push(TW.Nodes[i].label);
}
return params;
}
......@@ -250,7 +250,7 @@ function clustersBy(daclass) {
var v_nodes = getVisibleNodes();
var min_pow = 0;
for(var i in v_nodes) {
var the_node = Nodes[ v_nodes[i].id ]
var the_node = TW.Nodes[ v_nodes[i].id ]
var attval = ( isUndef(the_node.attributes) || isUndef(the_node.attributes[daclass]) )? v_nodes[i][daclass]: the_node.attributes[daclass];
if( !isNaN(parseFloat(attval)) ) { //is float
while(true) {
......@@ -268,7 +268,7 @@ function clustersBy(daclass) {
var real_max = -1;
var themult = Math.pow(10,min_pow);
for(var i in v_nodes) {
var the_node = Nodes[ v_nodes[i].id ]
var the_node = TW.Nodes[ v_nodes[i].id ]
var attval = ( isUndef(the_node.attributes) || isUndef(the_node.attributes[daclass]) )? v_nodes[i][daclass]: the_node.attributes[daclass];
var attnumber = Number(attval);
var round_number = Math.round( attnumber*themult ) ;
......@@ -298,19 +298,19 @@ function clustersBy(daclass) {
var newval_color = Math.round( ( Min_color+(NodeID_Val[i]["round"]-real_min)*((Max_color-Min_color)/(real_max-real_min)) ) );
var hex_color = rgbToHex(255, (255-newval_color) , 0)
partialGraph._core.graph.nodesIndex[i].color = hex_color
TW.partialGraph._core.graph.nodesIndex[i].color = hex_color
var newval_size = Math.round( ( Min_size+(NodeID_Val[i]["round"]-real_min)*((Max_size-Min_size)/(real_max-real_min)) ) );
partialGraph._core.graph.nodesIndex[i].size = newval_size;
TW.partialGraph._core.graph.nodesIndex[i].size = newval_size;
// pr("real:"+ NodeID_Val[i]["real"] + " | newvalue: "+newval_size)
partialGraph._core.graph.nodesIndex[i].label = "("+NodeID_Val[i]["real"].toFixed(min_pow)+") "+Nodes[i].label
TW.partialGraph._core.graph.nodesIndex[i].label = "("+NodeID_Val[i]["real"].toFixed(min_pow)+") "+TW.Nodes[i].label
}
// [ / Scaling node colours(0-255) and sizes(3-5) ]
partialGraph.refresh();
partialGraph.draw();
TW.partialGraph.refresh();
TW.partialGraph.draw();
// [ Edge-colour by source-target nodes-colours combination ]
......@@ -324,15 +324,14 @@ function clustersBy(daclass) {
var r = (a[0] + b[0]) >> 1;
var g = (a[1] + b[1]) >> 1;
var b = (a[2] + b[2]) >> 1;
partialGraph._core.graph.edgesIndex[e_id].color = "rgba("+[r,g,b].join(",")+",0.5)";
TW.partialGraph._core.graph.edgesIndex[e_id].color = "rgba("+[r,g,b].join(",")+",0.5)";
}
// [ / Edge-colour by source-target nodes-colours combination ]
if(daclass!="degree")
set_ClustersLegend ( daclass )
set_ClustersLegend ( null )
partialGraph.refresh();
partialGraph.draw();
TW.partialGraph.refresh();
TW.partialGraph.draw();
}
function colorsBy(daclass) {
......@@ -346,9 +345,9 @@ function colorsBy(daclass) {
pr("")
if(daclass=="clust_louvain") {
if(!partialGraph.states.slice(-1)[0].LouvainFait) {
if(!TW.partialGraph.states.slice(-1)[0].LouvainFait) {
RunLouvain()
partialGraph.states.slice(-1)[0].LouvainFait = true
TW.partialGraph.states.slice(-1)[0].LouvainFait = true
}
}
......@@ -356,11 +355,11 @@ function colorsBy(daclass) {
colorList.sort(function(){ return Math.random()-0.5; });
for(var i in v_nodes) {
var the_node = Nodes[ v_nodes[i].id ]
var the_node = TW.Nodes[ v_nodes[i].id ]
var attval = ( isUndef(the_node.attributes) || isUndef(the_node.attributes[daclass]) )? v_nodes[i][daclass]: the_node.attributes[daclass];
partialGraph._core.graph.nodesIndex[v_nodes[i].id].color = colorList[ attval ]
TW.partialGraph._core.graph.nodesIndex[v_nodes[i].id].color = colorList[ attval ]
}
partialGraph.draw();
TW.partialGraph.draw();
// [ Edge-colour by source-target nodes-colours combination ]
var v_edges = getVisibleEdges();
......@@ -374,18 +373,18 @@ function colorsBy(daclass) {
var r = (a[0] + b[0]) >> 1;
var g = (a[1] + b[1]) >> 1;
var b = (a[2] + b[2]) >> 1;
partialGraph._core.graph.edgesIndex[e_id].color = "rgba("+[r,g,b].join(",")+",0.5)";
TW.partialGraph._core.graph.edgesIndex[e_id].color = "rgba("+[r,g,b].join(",")+",0.5)";
}
}
// [ / Edge-colour by source-target nodes-colours combination ]
set_ClustersLegend ( daclass )
partialGraph.refresh();
partialGraph.draw();
TW.partialGraph.refresh();
TW.partialGraph.draw();
}
//just for fun
function makeEdgeWeightUndef() {
for(var e in partialGraph._core.graph.edges) {
partialGraph._core.graph.edges[e].weight=1;
for(var e in TW.partialGraph._core.graph.edges) {
TW.partialGraph._core.graph.edges[e].weight=1;
}
}
\ No newline at end of file
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