remove only trailing spaces

crowdsourcingModule/init.js

@@ -2,7 +2,7 @@
 // ====================
 // Allows suggestions from search box
 
-// Our module_name is simultaneously 3 things: 
+// Our module_name is simultaneously 3 things:
 //   - a DivsFlag for settings_explorerjs
 //   - our current dir for this module's files (and this init.js)
 //   - the class of module's html elements

crowdsourcingModule/suggest.js

@@ -24,7 +24,7 @@ $("#searchinput").on("tw:eraseNodeSet", function(e) {
 
 // emptyNodeSet event when Tinawab had a search but with no matches
 $("#searchinput").on("tw:emptyNodeSet", function(e) {
-    
+
     $('#savesuggestion').prop('disabled', false) ;
     // when query has no match
     if (e.nodeIds == null || e.nodeIds.length == 0) {
@@ -59,12 +59,12 @@ function save_suggestions(term) {
         "data" : term,
         "date" : (new Date()).toISOString(),
     }
-    
+
     // sqlite columns in new table 'terms'
     // 0|source|CHAR(250)|0||0
     // 1|suggestion|CHAR(250)|0||0
     // 2|time|CHAR(30)|0||0
-    
+
     // console.log( "SAVE INFO:" + info )
     $.ajax({
         type: "POST",
@@ -84,21 +84,21 @@ function save_suggestions(term) {
             p.append(i);
             p.append(' was saved as a suggestion');
             $("#crowdsourcing_answer").html(p) ;
-            
+
             // show "saved" icon
             $("#saveicon").removeClass("glyphicon-save");
             $("#saveicon").addClass("glyphicon-saved");
-            
+
             // reset state after 3 secs
             setTimeout(function() {
                 clean_crowdsourcingzone() ;
-                
+
                 // if we want to reset the input value too
                 // $("#proposed_terms").val('') ;
             }, 3000);
         },
 
-        error: function(exception) { 
+        error: function(exception) {
             console.log(exception)
             console.log("exception!:"+exception.status)
         }
@@ -134,11 +134,11 @@ function clean_crowdsourcingzone() {
                 //~ }, 3000);
             //~ }, 1000);
         //~ },
-//~ 
-        //~ error: function(exception) { 
+//~
+        //~ error: function(exception) {
             //~ console.log(exception)
             //~ console.log("exception!:"+exception.status)
         //~ }
-//~ 
+//~
     //~ })
 //~ }

histogramModule/init.js

@@ -2,7 +2,7 @@
 // =================
 // Presents a histogram from WOS API
 
-// Our module_name is simultaneously 3 things: 
+// Our module_name is simultaneously 3 things:
 //   - a DivsFlag for settings_explorerjs
 //   - our current dir for this module's files (and this init.js)
 //   - the class of module's html elements

settings_explorerjs.js

@@ -52,7 +52,7 @@ var TW = {}
     TW.SystemStates.opposites = [];
     TW.catSoc = "Document";
     TW.catSem = "NGram";
-    
+
     TW.strSearchBar = "Select or suggest topics";
 
 var ParseCustom = function () {};
@@ -85,7 +85,7 @@ var desirableScholarSize=6; //Remember that all scholars have the same size!
  *Three states:
  *  - true: fa2 running at start
  *  - false: fa2 stopped at start, button exists
- *  - "off": button doesn't exist, fa2 stopped forever 
+ *  - "off": button doesn't exist, fa2 stopped forever
  **/ var fa2enabled=false;//"off";
 var stopcriteria = false;
 var iterationsFA2=1000;
@@ -120,7 +120,7 @@ var sigmaJsMouseProperties = {
     maxRatio: 50
 };
 // ============ < / SIGMA.JS PROPERTIES > ============
-         
+
 
 // ============ < / DEVELOPER OPTIONS > ============
 
@@ -165,15 +165,15 @@ var overviewScale = 0.25;
 var overviewHover=false;
 var moveDelay = 80, zoomDelay = 2;
 //var Vecindad;
-TW.partialGraph; 
+TW.partialGraph;
 var otherGraph;
-TW.Nodes = []; 
+TW.Nodes = [];
 TW.Edges = [];
 TW.Clusters = [];
 
 var nodeslength=0;
 
-var labels = [];   
+var labels = [];
 
 var numberOfDocs=0;
 var numberOfNGrams=0;
@@ -232,4 +232,3 @@ var RVUniformC = function(seed){
     };
 }
 //unifCont = new RVUniformC(100000000)
-

tinawebJS/asyncFA2.js

@@ -237,7 +237,7 @@ var ForceAtlas2 = function(graph) {
             totalSwinging += n.fa2.mass * swinging;
             swingingSum += swinging;
             promdxdy += (Math.abs(n.fa2.dx)+Math.abs(n.fa2.dy))/2; /**/
-            
+
             totalEffectiveTraction += n.fa2.mass *
                                       0.5 *
                                       Math.sqrt(
@@ -246,15 +246,15 @@ var ForceAtlas2 = function(graph) {
                                       );
           }
         });
-        
+
         self.p.totalSwinging = totalSwinging;
-        
+
         var convg= ((Math.pow(nodes.length,2))/promdxdy);    /**/
         var swingingVSnodes_length = swingingSum/nodes.length;     /**/
-        // if(convg > swingingVSnodes_length){ 
+        // if(convg > swingingVSnodes_length){
         //     self.p.banderita=true;
         // }
-        
+
         self.p.totalEffectiveTraction = totalEffectiveTraction;
 
         // We want that swingingMovement < tolerance * convergenceMovement
@@ -880,7 +880,7 @@ var Region = function(nodes, depth) {
     massCenterX: 0,
     massCenterY: 0
   };
-  
+
   console.log("updating mass and geometry");
   this.updateMassAndGeometry();
 }
@@ -960,7 +960,7 @@ var applyForce = function(n, Force, theta) {
 
 
 
-//   [ NEW STUFF FOR WORKERS ] 
+//   [ NEW STUFF FOR WORKERS ]
 
   // 01. Return the values to MainContext when spatialization is finished
   var startForceAtlas2 = function(graph,limit_it) {
@@ -987,7 +987,7 @@ var applyForce = function(n, Force, theta) {
       forceatlas2 = new ForceAtlas2(graph);
       forceatlas2.setAutoSettings();
       forceatlas2.init();
-      
+
       count=0;
       flag=false;
       while(true){
@@ -1000,13 +1000,13 @@ var applyForce = function(n, Force, theta) {
           }
           count++;
           if(flag||count>limit_it) break;
-      }    
+      }
       //    pr(forceatlas2.graph.nodes[0].x)
       //    pr(forceatlas2.graph.nodes[0].y)
       //    console.log("\titerations: "+count)
       result={
           "nodes":forceatlas2.graph.nodes,
-          "it":count        
+          "it":count
       }
       return result;
   };
@@ -1024,8 +1024,8 @@ var applyForce = function(n, Force, theta) {
           "nodes":result.nodes,
           "it":result.it
       });
-      
+
   }, false);
 
 
-//   [ / NEW STUFF FOR WORKERS ] 
+//   [ / NEW STUFF FOR WORKERS ]
\ No newline at end of file

tinawebJS/globalUtils.js

@@ -51,7 +51,7 @@ function isUndef(variable){
 
 $.fn.toggleClick = function(){
         methods = arguments, // store the passed arguments for future reference
-            count = methods.length; // cache the number of methods 
+            count = methods.length; // cache the number of methods
 
         //use return this to maintain jQuery chainability
         return this.each(function(i, item){
@@ -101,7 +101,7 @@ function ArraySortByValue(array, sortFunc){
     for (var k in array) {
         if (array.hasOwnProperty(k)) {
             tmp.push({
-                key: k, 
+                key: k,
                 value:  array[k]
             });
             if((array[k]) > oposMAX) oposMAX= array[k];
@@ -110,8 +110,8 @@ function ArraySortByValue(array, sortFunc){
 
     tmp.sort(function(o1, o2) {
         return sortFunc(o1.value, o2.value);
-    });   
-    return tmp;      
+    });
+    return tmp;
 }
 
 
@@ -121,7 +121,7 @@ function ArraySortByKey(array, sortFunc){
     for (var k in array) {
         if (array.hasOwnProperty(k)) {
             tmp.push({
-                key: k, 
+                key: k,
                 value:  array[k]
             });
         }
@@ -129,10 +129,10 @@ function ArraySortByKey(array, sortFunc){
 
     tmp.sort(function(o1, o2) {
         return sortFunc(o1.key, o2.key);
-    });   
-    return tmp;      
+    });
+    return tmp;
 }
-    
+
 
 function is_empty(obj) {
     // Assume if it has a length property with a non-zero value
@@ -214,7 +214,7 @@ normalizeString = function(string, escapeHtml) {
 // (or use jquery .text())
 saferString = function(string) {
     // TODO table in an outer scope
-    conversions = { 
+    conversions = {
         '&' : '&'   ,
         '<' : '&lt;'    ,
         '>' : '&gt;'    ,
@@ -222,17 +222,17 @@ saferString = function(string) {
         "'" : '&apos;'  ,
         "{" : '&lcub;'  ,
         "}" : '&rcub;'  ,
-        '%' : '&percnt;' 
+        '%' : '&percnt;'
     } ;
-    
+
     matchables = /[&<>"'{}%]/g ;
-    
+
     if (! typeof string == "string") {
         return "" ;
     }
     else {
         return string.replace(
-            matchables, 
+            matchables,
             function(char) {
                 return conversions[char]
             }
@@ -243,17 +243,17 @@ saferString = function(string) {
 
 
  /**
-  * function to load a given css file 
-  */ 
+  * function to load a given css file
+  */
  loadCSS = function(href) {
      var cssLink = $("<link rel='stylesheet' type='text/css' href='"+href+"'>");
-     $("head").append(cssLink); 
+     $("head").append(cssLink);
  };
 
 /**
- * function to load a given js file 
- */ 
+ * function to load a given js file
+ */
  loadJS = function(src) {
      var jsLink = $("<script type='text/javascript' src='"+src+"'>");
-     $("head").append(jsLink); 
- }; 
+     $("head").append(jsLink);
+ };

tinawebJS/jLouvain.js

-/* 
+/*
 Author: Corneliu S. (github.com/upphiminn)
 
-This is a javascript implementation of the Louvain 
+This is a javascript implementation of the Louvain
 community detection algorithm (http://arxiv.org/abs/0803.0476)
-Based on https://bitbucket.org/taynaud/python-louvain/overview 
+Based on https://bitbucket.org/taynaud/python-louvain/overview
 
 */
 (function(){
@@ -48,16 +48,16 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 			});
 			return weight;
 		};
-		
+
 		function get_neighbours_of_node(graph, node){
 			if(typeof graph._assoc_mat[node] == 'undefined')
 				return [];
 
-			var neighbours = Object.keys(graph._assoc_mat[node]);		
+			var neighbours = Object.keys(graph._assoc_mat[node]);
 			return neighbours;
 		}
-		
-		
+
+
 		function get_edge_weight(graph, node1, node2){
 			return graph._assoc_mat[node1] ? graph._assoc_mat[node1][node2] : undefined;
 		}
@@ -113,7 +113,7 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 		    return temp;
 		}
 
-		//Core-Algorithm Related 
+		//Core-Algorithm Related
 		function init_status(graph, status, part){
 			status['nodes_to_com'] = {};
 			status['total_weight'] = 0;
@@ -184,13 +184,13 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 
 			var weights = {};
 			var neighboorhood = get_neighbours_of_node(graph, node);//make iterable;
-			
+
 			neighboorhood.forEach(function(neighbour, i){
 				if(neighbour != node){
-					var weight = graph._assoc_mat[node][neighbour] || 1; 
+					var weight = graph._assoc_mat[node][neighbour] || 1;
 					var neighbourcom = status.nodes_to_com[neighbour];
 					weights[neighbourcom] = (weights[neighbourcom] || 0) + weight;
-				}	
+				}
 			});
 
 			return weights;
@@ -212,7 +212,7 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 
 		function __renumber(dict){
 			var count = 0;
-			var ret = clone(dict); //deep copy :) 
+			var ret = clone(dict); //deep copy :)
 			var new_values = {};
 			var dict_keys = Object.keys(dict);
 			dict_keys.forEach(function(key){
@@ -255,7 +255,7 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 							best_increase = incr;
 							best_com = com;
 						}
-					});	
+					});
 
 					__insert(node, best_com, neigh_communities[best_com] || 0, status);
 
@@ -278,7 +278,7 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 				weight = edge.weight || 1;
 				var com1 = partition[edge.source];
 				var com2 = partition[edge.target];
-				w_prec = (get_edge_weight(ret, com1, com2) || 0); 
+				w_prec = (get_edge_weight(ret, com1, com2) || 0);
 				var new_weight = (w_prec + weight);
 				add_edge_to_graph(ret, {'source': com1, 'target': com2, 'weight': new_weight});
 			});
@@ -298,7 +298,7 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 
 
 		function generate_dendogram(graph, part_init){
-			
+
 			if(graph.edges.length == 0){
 				var part = {};
 				graph.nodes.forEach(function(node,i){
@@ -326,14 +326,14 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 					break;
 
 				partition = __renumber(status.nodes_to_com);
-				status_list.push(partition); 
+				status_list.push(partition);
 
 				mod = new_mod;
 				current_graph = induced_graph(partition, current_graph);
 				init_status(current_graph, status);
 			}
 
-			return status_list; 
+			return status_list;
 		}
 
 		var core = function(){
@@ -361,7 +361,7 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 						  		   '_assoc_mat': assoc_mat };
 			}
 			return core;
-			
+
 		};
 
 		core.partition_init = function(prttn){
@@ -373,4 +373,4 @@ Based on https://bitbucket.org/taynaud/python-louvain/overview
 
 		return core;
 	}
-})();
+})();
\ No newline at end of file

tinawebJS/main.js

@@ -47,13 +47,13 @@ var AjaxSync = (function(TYPE, URL, DATA, CT , DT) {
                 }
                 Result = { "OK":true , "format":format , "data":data };
             },
-            error: function(exception) { 
+            error: function(exception) {
                 Result = { "OK":false , "format":false , "data":exception.status };
             }
         });
     return Result;
 }).index();
- 
+
 function getGexfPath(v){
     var gexfpath=(TW.gexfDictReverse[v])?TW.gexfDictReverse[v]:v;
     return gexfpath;
@@ -73,7 +73,7 @@ var file =""
 if(!isUndef(getUrlParam.mode)) { // if {db|api}.json
     file = getUrlParam.mode
 } else {
-    if( !isUndef(getUrlParam.file) ) 
+    if( !isUndef(getUrlParam.file) )
         TW.mainfile.unshift( getUrlParam.file );
 
     var unique_mainfile = TW.mainfile.filter(function(item, pos) {
@@ -87,7 +87,7 @@ if(RES["OK"]) {
 
     var fileparam;// = { db|api.json , somefile.json|gexf }
     var the_data = RES["data"];
-    
+
 
     var the_file = "";
     if ( !isUndef(getUrlParam.mode) && getUrlParam.mode=="db.json") {
@@ -141,7 +141,7 @@ if(RES["OK"]) {
         fileparam = sub_RES["format"]
         pr(the_data.length)
         pr(fileparam)
-        
+
         getUrlParam.file=the_file;
         console.log(" .  .. . -. - .- . - -.")
         console.log(getUrlParam.file)
@@ -161,7 +161,7 @@ if(RES["OK"]) {
     if ( file!="db.json" && file!="api.json" )
         fileparam = RES["format"];
 
-    
+
     start = new ParseCustom(  fileparam , the_data );
     categories = start.scanFile(); //user should choose the order of categories
     pr("Categories: ")
@@ -186,11 +186,11 @@ if(RES["OK"]) {
 
     for(var i in categories) {
         TW.Filters[i] = {}
-        TW.Filters[i]["#slidercat"+i+"edgesweight"] = true;        
-    } 
-    
+        TW.Filters[i]["#slidercat"+i+"edgesweight"] = true;
+    }
+
     // [ Initiating Sigma-Canvas ]
-    var twjs_ = new TinaWebJS('#sigma-example'); 
+    var twjs_ = new TinaWebJS('#sigma-example');
     console.log( twjs_.AdjustSigmaCanvas() );
     $( window ).resize(function() { console.log(twjs_.AdjustSigmaCanvas()) });
     // [ / Initiating Sigma-Canvas ]
@@ -242,7 +242,7 @@ if(RES["OK"]) {
         var past = TW.partialGraph.states.slice(-2)[0] // avant Last
         console.log("previous level: "+past.level)
         console.log("new level: "+present.level)
-        
+
         console.log(" % % % % % % % % % % ")
         console.log("")
 
@@ -270,7 +270,7 @@ if(RES["OK"]) {
             $("#category0").hide();
             $("#category1").show();
 
-            if($("#slidercat1nodesweight").html()=="") 
+            if($("#slidercat1nodesweight").html()=="")
                 NodeWeightFilter( this.categories , "#slidercat1nodesweight" ,  this.categories[1],  "type" ,"size");
 
             if($("#slidercat1edgesweight").html()=="")
@@ -288,7 +288,7 @@ if(RES["OK"]) {
             $("#category0").show();
             $("#category1").hide();
 
-            if($("#slidercat0nodesweight").html()=="") 
+            if($("#slidercat0nodesweight").html()=="")
                 NodeWeightFilter( this.categories , "#slidercat0nodesweight" ,  this.categories[0],  "type" ,"size");
 
             if($("#slidercat0edgesweight").html()=="")
@@ -300,7 +300,7 @@ if(RES["OK"]) {
             }
             set_ClustersLegend ( "clust_default" )
         } else {
-            
+
         //finished
         $("#slidercat1nodessize").freshslider({
             step:1,
@@ -320,7 +320,7 @@ if(RES["OK"]) {
                        TW.partialGraph.draw();
                 });
             }
-        }); 
+        });
 
         }
 
@@ -370,6 +370,3 @@ ProcessDivsFlags() ;
 $("#searchinput").attr('placeholder', TW.strSearchBar) ;
 
 console.log("finish")
-
-
-

tinawebJS/methods.js

@@ -10,7 +10,7 @@ function cancelSelection (fromTagCloud) {
     TW.partialGraph.refresh();
 
     TW.partialGraph.states.slice(-1)[0].selections=[]
-    
+
     //Nodes colors go back to normal
     overNodes=false;
     e = TW.partialGraph._core.graph.edges;
@@ -19,18 +19,18 @@ function cancelSelection (fromTagCloud) {
             e[i].attr['grey'] = 0;
     }
     TW.partialGraph.draw(2,1,2);
-                
+
     TW.partialGraph.iterNodes(function(n){
             n.active=false;
             n.color = n.attr['grey'] ? n.attr['true_color'] : n.color;
             n.attr['grey'] = 0;
     }).draw(2,1,2);
     //Nodes colors go back to normal
-    
-    
-    
+
+
+
     if(fromTagCloud==false){
-        $("#names").html(""); 
+        $("#names").html("");
         $("#topPapers").html(""); $("#topPapers").hide();
         $("#opossiteNodes").html(""); $("#tab-container").hide();
         $("#information").html("");
@@ -38,11 +38,11 @@ function cancelSelection (fromTagCloud) {
         $("#unselectbutton").hide();
         $("#tips").html(getTips());
     }
-    
+
     // we send our "eraseNodeSet" event
     // (signal for plugins that any selection behavior is finished)
     $('#searchinput').trigger("tw:eraseNodeSet");
-    
+
     for(var i in deselections){
         if( !isUndef(TW.partialGraph._core.graph.nodesIndex[i]) ) {
             TW.partialGraph._core.graph.nodesIndex[i].forceLabel=false;
@@ -57,9 +57,9 @@ function cancelSelection (fromTagCloud) {
     TW.partialGraph.draw();
 }
 
-function highlightSelectedNodes(flag){ 
+function highlightSelectedNodes(flag){
     pr("\t***methods.js:highlightSelectedNodes(flag)"+flag+" selEmpty:"+is_empty(selections))
-    if(!is_empty(selections)){          
+    if(!is_empty(selections)){
         for(var i in selections) {
             if(TW.Nodes[i].type==TW.catSoc && swclickActual=="social"){
                 node = TW.partialGraph._core.graph.nodesIndex[i];
@@ -73,13 +73,13 @@ function highlightSelectedNodes(flag){
                 node = TW.partialGraph._core.graph.nodesIndex[i];
                 node.active = flag;
             }
-            else break;        
+            else break;
         }
-        
+
     }
 }
 
-function alertCheckBox(eventCheck){    
+function alertCheckBox(eventCheck){
     if(!isUndef(eventCheck.checked)) checkBox=eventCheck.checked;
 }
 
@@ -98,7 +98,7 @@ function RefreshState(newNOW){
 	if (newNOW!="") {
 	    PAST = NOW;
 	    NOW = newNOW;
-		
+
 		// if(NOW=="a" || NOW=="A" || NOW=="AaBb") {
 		// 	$("#category-A").show();
 		// }
@@ -108,7 +108,7 @@ function RefreshState(newNOW){
 	}
 
     $("#category-A").hide();
-    $("#category-B").hide();  
+    $("#category-B").hide();
     // i=0; for(var s in selections) { i++; break;}
     // if(is_empty(selections) || i==0) LevelButtonDisable(true);
     // else LevelButtonDisable(false);
@@ -137,7 +137,7 @@ function RefreshState(newNOW){
         $("#semLoader").hide();
         $("#category-A").show();
         $("#colorGraph").show();
-        
+
     }
     if(NOW=="B" || NOW=="b") {
         var N=( Object.keys(TW.Nodes).filter(function(n){return TW.Nodes[n].type==TW.catSem}) ).length
@@ -160,7 +160,7 @@ function RefreshState(newNOW){
             $.doTimeout(30,function (){
                 EdgeWeightFilter("#sliderBEdgeWeight", "label" , "nodes2", "weight");
                 NodeWeightFilter ( "#sliderBNodeWeight"  , "NGram", "type" , "size");
-                
+
             });
         } else {
             $("#semLoader").css('visibility', 'visible');
@@ -261,7 +261,7 @@ function htmlfied_nodesatts(elems){
                     }
                 } else {
                     information += '<li>' + $("<div/>").html(node.htmlCont).text() + '</li>';
-                }        
+                }
                 socnodes.push(information)
             }
 
@@ -330,7 +330,7 @@ function updateLeftPanel_fix( sels , oppos ) {
 
     if(oppos.length>0) {
 	    alterNodesDIV+='<div id="opossitesBox">';//tagcloud
-	    alterNodesDIV+= htmlfied_alternodes( oppos ).join("\n") 
+	    alterNodesDIV+= htmlfied_alternodes( oppos ).join("\n")
 	    alterNodesDIV+= '</div>';
 	}
 
@@ -362,18 +362,18 @@ function updateLeftPanel_fix( sels , oppos ) {
     //using the readmore.js
     // ive put a limit for nodes-name div
     // and opposite-nodes div aka tagcloud div
-    // and im commenting now because github is not 
+    // and im commenting now because github is not
     // pushing my commit
     // because i need more lines, idk
-    $("#names").html(namesDIV).readmore({maxHeight:100}); 
+    $("#names").html(namesDIV).readmore({maxHeight:100});
     $("#tab-container").show();
-    $("#opossiteNodes").html(alterNodesDIV).readmore({maxHeight:200}); 
-    $("#sameNodes").html(sameNodesDIV).readmore({maxHeight:200}); 
+    $("#opossiteNodes").html(alterNodesDIV).readmore({maxHeight:200});
+    $("#sameNodes").html(sameNodesDIV).readmore({maxHeight:200});
     $("#information").html(informationDIV);
     $("#tips").html("");
 
     if(TW.categoriesIndex.length==1) getTopPapers("semantic");
-    else getTopPapers(swclickActual); 
+    else getTopPapers(swclickActual);
 }
 
 function printStates() {
@@ -437,7 +437,7 @@ function graphTagCloudElem(nodes) {
                 nodes_2_colour[t]=false;
                 edges_2_colour[s+";"+t]=true;
                 edges_2_colour[t+";"+s]=true;
-                if( !selections[t]  ) 
+                if( !selections[t]  )
                     voisinage[ Number(t) ] = true;
             }
         }
@@ -461,10 +461,10 @@ function graphTagCloudElem(nodes) {
                 // console.log( "\t" + voisinage[i] + " vs " + voisinage[j] )
                 add1Elem( voisinage[i]+";"+voisinage[j] )
             }
-            
+
         }
     }
-    
+
     futurelevel = false;
 
 
@@ -481,7 +481,7 @@ function graphTagCloudElem(nodes) {
     TW.partialGraph.states[avantlastpos] = {};
     TW.partialGraph.states[avantlastpos].level = present.level;
     TW.partialGraph.states[avantlastpos].selections = present.selections;
-    TW.partialGraph.states[avantlastpos].type = present.type; 
+    TW.partialGraph.states[avantlastpos].type = present.type;
     TW.partialGraph.states[avantlastpos].opposites = present.opposites;
     TW.partialGraph.states[avantlastpos].categories = present.categories;//to_del
     TW.partialGraph.states[avantlastpos].categoriesDict = present.categoriesDict;//to_del
@@ -503,7 +503,7 @@ function graphTagCloudElem(nodes) {
 }
 
 function greyEverything(){
-    
+
     nds = TW.partialGraph._core.graph.nodes.filter(function(n) {
                             return !n['hidden'];
                         });
@@ -515,7 +515,7 @@ function greyEverything(){
             }
             nds[i].attr['grey'] = 1;
     }
-    
+
     eds = TW.partialGraph._core.graph.edges.filter(function(e) {
                             return !e['hidden'];
                         });
@@ -535,18 +535,18 @@ function graphResetColor(){
     eds = TW.partialGraph._core.graph.edges.filter(function(x) {
                             return !x['hidden'];
           });
-          
+
     for(var x in nds){
         n=nds[x];
         n.attr["grey"] = 0;
         n.color = n.attr["true_color"];
     }
-    
+
     for(var x in eds){
         e=eds[x];
         e.attr["grey"] = 0;
         e.color = e.attr["true_color"];
-    }  
+    }
 }
 
 function hideEverything(){
@@ -595,7 +595,7 @@ function add1Elem(id) {
     } else { // It's an edge!
         if(!isUndef(gete(id))) return;
         if(TW.Edges[id] && !TW.Edges[id].lock){
-            // var present = TW.partialGraph.states.slice(-1)[0];            
+            // var present = TW.partialGraph.states.slice(-1)[0];
             var anedge = {
                 id:         id,
                 sourceID:   TW.Edges[id].source,
@@ -625,7 +625,7 @@ function pushFilterValue(filtername,arg){
 }
 
 function saveGraph() {
-    
+
     size = getByID("check_size").checked
     color = getByID("check_color").checked
     atts = {"size":size,"color":color}
@@ -657,15 +657,15 @@ function saveGEXF(nodes,edges,atts){
     gexf += '</attributes>\n';
     gexf += "<nodes>\n";
 
-    for(var n in nodes){    
-        
+    for(var n in nodes){
+
         gexf += '<node id="'+nodes[n].id+'" label="'+nodes[n].label+'">\n';
         gexf += ' <viz:position x="'+nodes[n].x+'"    y="'+nodes[n].y+'"  z="0" />\n';
         if(atts["color"]) gexf += ' <viz:size value="'+nodes[n].size+'" />\n';
         if(atts["color"]) {
             col = hex2rga(nodes[n].color);
             gexf += ' <viz:color r="'+col[0]+'" g="'+col[1]+'" b="'+col[2]+'" a="1"/>\n';
-        }    
+        }
         gexf += ' <attvalues>\n';
         gexf += ' <attvalue for="0" value="'+nodes[n].type+'"/>\n';
         gexf += ' <attvalue for="1" value="'+TW.Nodes[nodes[n].id].CC+'"/>\n';
@@ -673,7 +673,7 @@ function saveGEXF(nodes,edges,atts){
         gexf += '</node>\n';
     }
     gexf += "\n</nodes>\n";
-    gexf += "<edges>\n";    
+    gexf += "<edges>\n";
     cont = 1;
     for(var e in edges){
         gexf += '<edge id="'+cont+'" source="'+edges[e].source.id+'"  target="'+edges[e].target.id+'" weight="'+edges[e].weight+'">\n';
@@ -687,9 +687,9 @@ function saveGEXF(nodes,edges,atts){
 }
 
 function saveGraphIMG(){
-        
+
         var strDownloadMime = "image/octet-stream"
-        
+
         var nodesDiv = TW.partialGraph._core.domElements.nodes;
         var nodesCtx = nodesDiv.getContext("2d");
 

tinawebJS/sigma.forceatlas2.js

@@ -149,7 +149,7 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
           }
 
          } else {
-          
+
           if( self.firstit ) {
             n.x = self.Ox + self.R*Math.cos(Math.PI*self.stepDeg*mult);
             n.y = self.Oy + self.R*Math.sin(Math.PI*self.stepDeg*mult);
@@ -158,7 +158,7 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
           }
 
          }
-         
+
         });
 
         self.firstit = false ;
@@ -274,21 +274,21 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
         if (self.p.edgeWeightInfluence == 0) {
           while (i < edges.length && i < self.state.index + cInt) {
             var e = edges[i++];
-            if(!e.hidden) { 
+            if(!e.hidden) {
               Attraction.apply_nn(e.source, e.target, 1);
             }
           }
         } else if (self.p.edgeWeightInfluence == 1) {
           while (i < edges.length && i < self.state.index + cInt) {
             var e = edges[i++];
-            if(!e.hidden) { 
+            if(!e.hidden) {
               Attraction.apply_nn(e.source, e.target, e.weight || 1);
             }
           }
         } else {
           while (i < edges.length && i < self.state.index + cInt) {
             var e = edges[i++];
-            if(!e.hidden) { 
+            if(!e.hidden) {
               Attraction.apply_nn(
                 e.source, e.target,
                 Math.pow(e.weight || 1, self.p.edgeWeightInfluence)
@@ -325,7 +325,7 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
             totalSwinging += n.fa2.mass * swinging;
             swingingSum += swinging;
             promdxdy += (Math.abs(n.fa2.dx)+Math.abs(n.fa2.dy))/2; /**/
-            
+
             totalEffectiveTraction += n.fa2.mass *
                                       0.5 *
                                       Math.sqrt(
@@ -334,16 +334,16 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
                                       );
           }
         });
-        
+
         self.p.totalSwinging = totalSwinging;
-        
+
         var convg= ((Math.pow(nodes.length,2))/promdxdy);    /**/
         var swingingVSnodes_length = swingingSum/nodes.length;     /**/
-        if(stopcriteria && (convg > swingingVSnodes_length)){ 
+        if(stopcriteria && (convg > swingingVSnodes_length)){
             pr("i've applied the stopcriteria: "+self.count)
-            TW.partialGraph.stopForceAtlas2(); 
+            TW.partialGraph.stopForceAtlas2();
         }
-        
+
         self.p.totalEffectiveTraction = totalEffectiveTraction;
 
         // We want that swingingMovement < tolerance * convergenceMovement
@@ -362,7 +362,7 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
 
         // Save old coordinates
         nodes.forEach(function(n) {
-          if(!n.hidden && n.degree>0) { 
+          if(!n.hidden && n.degree>0) {
             n.old_x = +n.x;
             n.old_y = +n.y;
           }
@@ -403,7 +403,7 @@ sigma.forceatlas2.ForceAtlas2 = function(graph , V , E) {
             }
           }
 
-          
+
             if(self.isolated>0 && self.count%50 == 0) {
               nodes.forEach(function(n) {
                 if(n.degree>0) {
@@ -994,7 +994,7 @@ sigma.forceatlas2.Region = function(nodes, depth) {
     massCenterX: 0,
     massCenterY: 0
   };
-  
+
   this.updateMassAndGeometry();
 }
 
@@ -1130,7 +1130,7 @@ sigma.publicPrototype.startForceAtlas2 = function() {
     if(isolatedBCauseFilter==ene) {
       TW.partialGraph.stopForceAtlas2();
       return;
-    } 
+    }
 
 
     $("#overviewzone").hide();
@@ -1148,7 +1148,7 @@ sigma.publicPrototype.startForceAtlas2 = function() {
         return;
       }
     });
-    
+
   }
 };
 

tinawebJS/sigma.min.js

@@ -487,7 +487,7 @@ sigma.classes.Cascade = function() {
 
                 drawHover();
                 drawActive();
-            
+
             //            if(cursor_size>0){
             //                pr("moving with mouse-circle ON");
             //            }
@@ -1074,9 +1074,9 @@ sigma.classes.Cascade = function() {
                 var s = 'Edge\'s target "' + target + '" does not exist yet.';
                 throw new Error(s);
             }
-              
+
             // var ident = params.sourceID.charAt(0)+params.targetID.charAt(0);
- 
+
             //edge color will be the combination of the 2 node colors
             var a = self.nodesIndex[source]['color'];
             var b = self.nodesIndex[target]['color'];
@@ -1098,7 +1098,7 @@ sigma.classes.Cascade = function() {
             var b = (a[2] + b[2]) >> 1;
             // var color = '#'+sigma.tools.rgbToHex(parseFloat(r),parseFloat(g),parseFloat(b))
             var color = "rgba( "+r+", "+g+" , "+b+" ,0.5)";
-            
+
             //pr(params.label);
             // if(params.label=="nodes1") {
             //     color = "#cedc75";
@@ -1127,7 +1127,7 @@ sigma.classes.Cascade = function() {
             e['source']['outDegree']++;
             e['target']['degree']++;
             e['target']['inDegree']++;
-          
+
             for (var k in params) {
                 switch (k) {
                     case 'id':
@@ -1271,7 +1271,7 @@ sigma.classes.Cascade = function() {
          * Deletes every nodes and edges from the graph.
          * @return {Graph} Returns itself.
          */
-        function empty() {  
+        function empty() {
 
             if(TW.partialGraph) {
                 if(TW.partialGraph.forceatlas2) {
@@ -1297,7 +1297,7 @@ sigma.classes.Cascade = function() {
                 self.edges.splice(0, self.edges.length);
             }
 
-            self.edgesIndex = {};  
+            self.edgesIndex = {};
             if(self.edgesIndex.length>0) {
                 pr("splicing edgesIndex")
                 self.edgesIndex.splice(0, self.edgesIndex.length);
@@ -1773,7 +1773,7 @@ sigma.classes.Cascade = function() {
 
             return self;
         };
-        
+
         this.emptyGraph = function() {
             s.graph.empty();
             return self;
@@ -2223,13 +2223,13 @@ sigma.classes.Cascade = function() {
 	      shape = self.p.defaultNodeShape;
 	    }
             ctx = nodesCtx;
-            
+
             ctx.fillStyle = node['color'];
-            
-            
+
+
             // Node border:
             ctx.beginPath();
-	    
+
 	    switch(shape) {
 	      case 'square':
                     wh=(node['displaySize'] * 2) + self.p.borderSize;
@@ -2237,7 +2237,7 @@ sigma.classes.Cascade = function() {
                                    node['displayY']-wh/2,
                                    wh,
                                    wh);
-                                  
+
         //		    ctx.strokeRect(node['displayX']-size-(1.3),
         //                                   node['displayY']-size-(1.3),
         //                                  (node['displaySize'] * 2) + self.p.borderSize,
@@ -2257,15 +2257,15 @@ sigma.classes.Cascade = function() {
 	    }
             ctx.closePath();
             ctx.fill();
-            
-            
-            
+
+
+
             // Node:
             ctx.beginPath();
 	    switch(shape) {
 	      case 'square':
                     wh=size*2;
-	      	    ctx.fillRect(node['displayX']-wh/2, 
+	      	    ctx.fillRect(node['displayX']-wh/2,
 		    		 node['displayY']-wh/2,
 		    		 wh,
 		    		 wh);
@@ -2309,12 +2309,12 @@ sigma.classes.Cascade = function() {
          * @param  {Object} edge The edge to draw.
          * @return {Plotter} Returns itself.
          */
-        function drawEdge(edge) { 
+        function drawEdge(edge) {
             var x1 = edge['source']['displayX'];
             var y1 = edge['source']['displayY'];
             var x2 = edge['target']['displayX'];
             var y2 = edge['target']['displayY'];
-            
+
             var color = edge['color'];
             if(!color) {
                 var a = edge['source']['color'];
@@ -2354,7 +2354,7 @@ sigma.classes.Cascade = function() {
                         }
                         else {
                             ctx.lineWidth = edge['displaySize'] / 3;/**/
-                        }                        
+                        }
                     }
                     else {
                     	//overNodes = TRUE
@@ -2402,7 +2402,7 @@ sigma.classes.Cascade = function() {
                 var fontSize;/* = self.p.labelSize == 'fixed' ?
                 self.p.defaultLabelSize :
                 self.p.labelSizeRatio * node['displaySize'];*/
-            
+
                 fontSize=(self.p.labelSizeRatio*node['displaySize'])<self.p.defaultLabelSize ?
                          self.p.defaultLabelSize:
                          self.p.labelSizeRatio*node['displaySize'];
@@ -2430,7 +2430,7 @@ sigma.classes.Cascade = function() {
         function drawHoverNode(node) {
             size = Math.round(node['displaySize'] * 10) / 10;
             ctx = hoverCtx;
-            
+
 	    nodeShape = node['shape'];
 	    if(!nodeShape) {
 	      nodeShape = self.p.defaultNodeShape;
@@ -2439,7 +2439,7 @@ sigma.classes.Cascade = function() {
             /*var fontSize = self.p.labelSize == 'fixed' ?
             		   self.p.defaultLabelSize :
             		   self.p.labelSizeRatio * node['displaySize'];*/
-                       
+
             fontSize=(self.p.labelSizeRatio*node['displaySize'])<self.p.defaultLabelSize ?
                       self.p.defaultLabelSize:
                       self.p.labelSizeRatio*node['displaySize'];
@@ -2485,7 +2485,7 @@ sigma.classes.Cascade = function() {
             ctx.fillStyle = self.p.nodeBorderColor == 'node' ?
             		    (node['color'] || self.p.defaultNodeColor) :
             		    self.p.defaultNodeBorderColor;
-	    
+
 	    switch(nodeShape) {
 	    case 'square':
                     ctx.lineWidth = 2;
@@ -2553,7 +2553,7 @@ sigma.classes.Cascade = function() {
         function drawActiveNode(node) {
             size = Math.round(node['displaySize'] * 10) / 10;
             ctx = hoverCtx;
-            
+
             if (!isOnScreen(node)) {
                 return self;
             }
@@ -2562,15 +2562,15 @@ sigma.classes.Cascade = function() {
 	    if(!nodeShape) {
 	      nodeShape = self.p.defaultNodeShape;
 	    }
-            
+
             /*var fontSize = self.p.labelSize == 'fixed' ?
                            self.p.defaultLabelSize :
                            self.p.labelSizeRatio * node['displaySize'];*/
-            
+
             fontSize=(self.p.labelSizeRatio*node['displaySize'])<self.p.defaultLabelSize ?
                       self.p.defaultLabelSize:
                       self.p.labelSizeRatio*node['displaySize'];
-            
+
             ctx.font =  (self.p.activeFontStyle || self.p.fontStyle || '') + ' ' +
                         fontSize + 'px ' +
                         (self.p.activeFont || self.p.font || '');
@@ -2578,13 +2578,13 @@ sigma.classes.Cascade = function() {
             ctx.fillStyle = self.p.labelHoverBGColor == 'node' ?
             (node['color'] || self.p.defaultNodeColor) :
             self.p.defaultActiveLabelBGColor;
-        
-        
+
+
 	    switch(nodeShape) {
                 case 'square':
-                    
+
                     // Node border:
-                    ctx.beginPath();     
+                    ctx.beginPath();
                     ctx.lineWidth = 2;
                     wh=(node['displaySize'] * 2) + self.p.borderSize;
                     ctx.strokeStyle="red";
@@ -2623,10 +2623,10 @@ sigma.classes.Cascade = function() {
                     ctx.shadowOffsetX = 0;
                     ctx.shadowOffsetY = 0;
                     ctx.shadowBlur = 0;
-                                        
-                    
+
+
                     // Node border:
-                    ctx.beginPath();                    
+                    ctx.beginPath();
                     ctx.fillStyle = self.p.nodeBorderColor == 'node' ?
                                     (node['color'] || self.p.defaultNodeColor) :
                                     self.p.defaultNodeBorderColor;
@@ -2637,11 +2637,11 @@ sigma.classes.Cascade = function() {
                             0,
                             Math.PI * 2,
                             true);
-                            
+
                     ctx.closePath();
                     ctx.fill();
-                    
-                    
+
+
                     // Node:
                     ctx.beginPath();
                     ctx.fillStyle = self.p.nodeActiveColor == 'node' ?
@@ -2656,7 +2656,7 @@ sigma.classes.Cascade = function() {
 
                     ctx.closePath();
                     ctx.fill();
-                    
+
                     break;
             }
             // Label:
@@ -2912,7 +2912,7 @@ sigma.classes.Cascade = function() {
                     );
                 TW.partialGraph.centreX = (self.mouseX*(overviewWidth/(TW.partialGraph._core.width-1)));
                 TW.partialGraph.centreY = (self.mouseY*(overviewHeight/(TW.partialGraph._core.height-1)));
-                
+
                 if (self.p['blockScroll']) {
                     if (event.preventDefault) {
                         event.preventDefault();
@@ -3803,4 +3803,3 @@ sigma.classes.Cascade = function() {
 
     sigma.publicPrototype = SigmaPublic.prototype;
 })();
-