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david Chavalarias
clinicaltrials
Commits
de49b2af
Commit
de49b2af
authored
Apr 03, 2017
by
Romain Loth
Browse files
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WIP port: tidy up
parent
a160c4eb
Changes
6
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6 changed files
with
174 additions
and
220 deletions
+174
-220
explorerjs.html
explorerjs.html
+21
-22
extras_explorerjs.js
extras_explorerjs.js
+1
-1
Tinaweb.js
tinawebJS/Tinaweb.js
+115
-153
methods.js
tinawebJS/methods.js
+1
-1
sigmaUtils.js
tinawebJS/sigmaUtils.js
+35
-42
sigma.js
tinawebJS/sigma_v1.2/sigma.js
+1
-1
No files found.
explorerjs.html
View file @
de49b2af
...
...
@@ -19,8 +19,7 @@
<link
rel=
"stylesheet"
href=
"libs/css2/twjs.css"
>
<link
rel=
"stylesheet"
href=
"libs/css2/selection-panels.css"
>
<link
rel=
"stylesheet"
href=
"libs/jquery-3/jquery-ui-1.12.1/jquery-ui.min.css"
media=
"screen"
>
<link
rel=
"stylesheet"
href=
"libs/bootstrap/css/bootstrap.css"
media=
"screen"
>
<!-- <link rel="stylesheet" href="libs/bootstrap-3/css/bootstrap.min.css"> -->
<link
rel=
"stylesheet"
href=
"libs/bootstrap-3/css/bootstrap.min.css"
media=
"screen"
>
<!-- NB bs2/3 not used for main grid (graph + bars) but inside the bars -->
<link
rel=
"stylesheet"
href=
"libs/css2/freshslider.css"
media=
"screen"
>
...
...
@@ -34,7 +33,10 @@
<div
class=
"container"
>
<div
class=
"navbar-header"
>
<a
href=
"#"
class=
"navbar-brand"
>
<img
width=
"20px"
src=
"libs/img2/home.png"
>
Mapping Risk Research
</a>
<a
href=
"#"
class=
"navbar-brand"
><img
style=
"width:20px;"
src=
"libs/img2/home.png"
></a>
</div>
<div
class=
"navbar-header"
>
<a
href=
"#"
class=
"navbar-brand"
>
Mapping Risk Research
</a>
</div>
<div
class=
"navbar-collapse collapse"
id=
"navbar-main"
>
...
...
@@ -110,7 +112,7 @@
<li>
<a>
<button
type=
"button"
id=
"changelevel"
class=
"btn btn-
info
btn-sm"
disabled
>
Change Level
</button>
<button
type=
"button"
id=
"changelevel"
class=
"btn btn-
primary
btn-sm"
disabled
>
Change Level
</button>
</a>
</li>
...
...
@@ -125,8 +127,12 @@
<div
id=
"slidercat0nodessize"
class=
"settingslider"
></div>
</a></li>
<li><a>
Colors
<div
class=
"colorgraph_div"
></div>
<li
class=
"dropdown"
>
<a
class=
"dropdown-toggle"
data-toggle=
"dropdown"
href=
"#"
role=
"button"
aria-haspopup=
"true"
aria-expanded=
"false"
>
Set Colors
<img
title=
"Set Colors"
src=
"libs/img2/colors.png"
width=
"20px"
><span
class=
"caret"
></span>
</a>
<ul
id=
"colorgraph-menu"
class=
"dropdown-menu"
>
</ul>
</a></li>
<!--
...
...
@@ -203,7 +209,7 @@
<span
class=
"input-group-btn"
>
<button
id=
"searchbutton"
title=
"Search the topic in the map"
class=
"btn btn-
info
"
class=
"btn btn-
primary
"
type=
"button"
>
<span
class=
"glyphicon glyphicon-search"
>
</span>
...
...
@@ -233,8 +239,8 @@
<input
id=
"checkboxdiv"
onclick=
"alertCheckBox(this);"
title=
"Add next search results to current selection"
class=
"nav btn btn-info"
type=
"checkbox"
>
</input>
<
p
style=
"font-size:75%; line-height:90%"
>
Add to selection
</p
>
type=
"checkbox"
>
<
span
style=
"position: relative; top: 4px; left: 5px;"
>
Add to selection
</span
>
</li>
<!-- /checkbox group -->
</ul>
<!-- /searchnav -->
...
...
@@ -370,8 +376,7 @@
<div
class=
"panel panel-default"
id=
"video_explanation"
>
<div
class=
"panel-heading"
>
<h4
class=
"panel-title"
>
<a
data-toggle=
"collapse"
data-target=
"#le_tutorial"
href=
"#"
>
<a
data-toggle=
"collapse"
data-target=
"#le_tutorial"
href=
"#le_tutorial"
>
<span
class=
"glyphicon glyphicon-eye-open"
aria-hidden=
"true"
></span>
Tutorial video
</a>
...
...
@@ -388,8 +393,7 @@
<div
class=
"panel panel-default"
id=
"tips_panel"
>
<div
class=
"panel-heading"
>
<h4
class=
"panel-title"
>
<a
data-toggle=
"collapse"
data-target=
"#tips"
href=
"#"
>
<a
data-toggle=
"collapse"
data-target=
"#tips"
href=
"#tips"
>
<span
class=
"glyphicon glyphicon-info-sign"
aria-hidden=
"true"
></span>
Tips
</a>
...
...
@@ -402,8 +406,7 @@
<div
class=
"panel panel-default"
id=
"credits_panel"
>
<div
class=
"panel-heading"
>
<h4
class=
"panel-title"
>
<a
data-toggle=
"collapse"
data-target=
"#credits"
href=
"#"
>
<a
data-toggle=
"collapse"
data-target=
"#credits"
href=
"#credits"
>
<span
class=
"glyphicon glyphicon-flag"
aria-hidden=
"true"
></span>
Credits
</a>
...
...
@@ -525,15 +528,11 @@
<script
src=
"libs/freshslider.1.0.js"
type=
"text/javascript"
></script>
<script
src=
"libs/readmore.js"
type=
"text/javascript"
></script>
<script
src=
"libs/bootstrap/js/bootstrap.min.js"
></script>
<script
src=
"libs/bootstrap/js/bootstrap-modal.js"
type=
"text/javascript"
></script>
<script
src=
"libs/bootstrap/js/bootstrap-hover-dropdown.min.js"
type=
"text/javascript"
></script>
<script
src=
"libs/bootstrap-native/bootstrap-native.min.js"
></script>
<script
src=
"tinawebJS/globalUtils.js"
type=
"text/javascript"
></script>
<!-- new sigma 1.2
imports -->
<!-- new sigma 1.2 imports -->
<script
src=
"tinawebJS/sigma_v1.2/sigma.js"
type=
"text/javascript"
language=
"javascript"
></script>
<script
src=
"tinawebJS/sigma_v1.2/plugins/sigma.layout.forceAtlas2/supervisor.js"
></script>
<script
src=
"tinawebJS/sigma_v1.2/plugins/sigma.layout.forceAtlas2/worker.js"
></script>
...
...
@@ -543,7 +542,7 @@
<script
src=
"tinawebJS/sigma_tools.js"
></script>
<!-- classic tinawebJS imports -->
<
!-- <script type="text/javascript" src="tinawebJS/jLouvain.js"></script> --
>
<
script
type=
"text/javascript"
src=
"tinawebJS/jLouvain.js"
></script
>
<!-- <script src="tinawebJS/sigma.v1.customized.js" type="text/javascript" language="javascript"></script> -->
<!-- <script src="tinawebJS/sigma.forceatlas2.js" type="text/javascript" language="javascript"></script> -->
<script
src=
"settings_explorerjs.js"
type=
"text/javascript"
language=
"javascript"
></script>
...
...
extras_explorerjs.js
View file @
de49b2af
...
...
@@ -447,7 +447,7 @@ function trackMouse(e) {
ctx
.
beginPath
();
// labels appear
var
nds
=
TW
.
partialGraph
.
graph
.
nodes
()
//
var nds = TW.partialGraph.graph.nodes()
// TODO replace by a hover binding (and POSS use quadtree zone)
//
...
...
tinawebJS/Tinaweb.js
View file @
de49b2af
This diff is collapsed.
Click to expand it.
tinawebJS/methods.js
View file @
de49b2af
...
...
@@ -174,7 +174,7 @@ function RefreshState(newNOW){
$
(
"#category-B"
).
show
();
}
TW
.
partialGraph
.
draw
(
);
TW
.
partialGraph
.
refresh
({
skipIndexation
:
true
}
);
}
...
...
tinawebJS/sigmaUtils.js
View file @
de49b2af
...
...
@@ -163,14 +163,18 @@ SigmaUtils = function () {
};
this
.
toggleEdges
=
function
()
{
var
now_flag
=
TW
.
partialGraph
.
settings
(
'drawEdges'
)
TW
.
partialGraph
.
settings
(
'drawEdges'
,
!
now_flag
)
TW
.
partialGraph
.
refresh
({
skipIndexation
:
true
})
}
// ================ /alternative rendering =====================
}
// ================ /alternative rendering =====================
}
//for socialgraph
function
showMeSomeLabels
(
N
){
...
...
@@ -240,25 +244,26 @@ function getedges(){
}
function
getVisibleEdges
()
{
return
TW
.
partialGraph
.
graph
.
edges
().
filter
(
function
(
e
)
{
// new sigma js POSS custom index to avoid loop
return
TW
.
partialGraph
.
graph
.
edges
().
filter
(
function
(
e
)
{
return
!
e
[
'hidden'
];
});
});
}
function
getVisibleNodes
()
{
return
TW
.
partialGraph
.
graph
.
nodes
().
filter
(
function
(
n
)
{
return
!
n
[
'hidden'
];
});
// new sigma js POSS custom index to avoid loop
return
TW
.
partialGraph
.
graph
.
nodes
().
filter
(
function
(
n
)
{
return
!
n
[
'hidden'
];
});
}
function
getNodesByAtt
(
att
)
{
return
TW
.
partialGraph
.
_core
.
graph
.
nodes
.
filter
(
function
(
n
)
{
return
TW
.
partialGraph
.
graph
.
nodes
()
.
filter
(
function
(
n
)
{
return
n
[
'type'
]
==
att
;
});
}
// new sigma.js
function
find
(
lquery
){
var
results
=
[];
...
...
@@ -426,28 +431,15 @@ function clustersBy(daclass) {
// [ / Scaling node colours(0-255) and sizes(3-5) ]
TW
.
partialGraph
.
refresh
({
skipIndexation
:
true
});
// [ Edge-colour by source-target nodes-colours combination ]
var
v_edges
=
getVisibleEdges
();
for
(
var
e
in
v_edges
)
{
var
e_id
=
v_edges
[
e
].
id
;
var
a
=
v_edges
[
e
].
source
.
color
;
var
b
=
v_edges
[
e
].
target
.
color
;
a
=
hex2rga
(
a
);
b
=
hex2rga
(
b
);
var
r
=
(
a
[
0
]
+
b
[
0
])
>>
1
;
var
g
=
(
a
[
1
]
+
b
[
1
])
>>
1
;
var
b
=
(
a
[
2
]
+
b
[
2
])
>>
1
;
TW
.
partialGraph
.
graph
.
edges
(
e_id
).
color
=
"rgba("
+
[
r
,
g
,
b
].
join
(
","
)
+
",0.5)"
;
}
repaintEdges
()
// [ / Edge-colour by source-target nodes-colours combination ]
set_ClustersLegend
(
null
)
TW
.
partialGraph
.
refresh
();
TW
.
partialGraph
.
draw
();
TW
.
partialGraph
.
refresh
({
skipIndexation
:
true
});
}
...
...
@@ -456,6 +448,22 @@ var totalsPerBinMin = {
'-1000000'
:
0
,
'-75'
:
0
,
'-50'
:
0
,
'-25'
:
0
,
'-10'
:
0
,
'10'
:
0
,
'25'
:
0
,
'50'
:
0
,
'75'
:
0
,
'100'
:
0
,
'125'
:
0
,
'150'
:
0
}
// Edge-colour by source-target nodes-colours combination
function
repaintEdges
()
{
var
v_edges
=
getVisibleEdges
();
for
(
var
e
in
v_edges
)
{
var
e_id
=
v_edges
[
e
].
id
;
var
a
=
TW
.
partialGraph
.
graph
.
nodes
(
v_edges
[
e
].
source
).
color
;
var
b
=
TW
.
partialGraph
.
graph
.
nodes
(
v_edges
[
e
].
target
).
color
;
a
=
hex2rga
(
a
);
b
=
hex2rga
(
b
);
var
r
=
(
a
[
0
]
+
b
[
0
])
>>
1
;
var
g
=
(
a
[
1
]
+
b
[
1
])
>>
1
;
var
b
=
(
a
[
2
]
+
b
[
2
])
>>
1
;
TW
.
partialGraph
.
graph
.
edges
(
e_id
).
color
=
"rgba("
+
[
r
,
g
,
b
].
join
(
","
)
+
",0.5)"
;
}
}
// rewrite of clustersBy with binning and for attributes that can have negative float values
function
colorsRelByBins
(
daclass
)
{
...
...
@@ -528,29 +536,14 @@ function colorsRelByBins(daclass) {
}
}
TW
.
partialGraph
.
refresh
();
TW
.
partialGraph
.
draw
();
// [ Edge-colour by source-target nodes-colours combination ]
var
v_edges
=
getVisibleEdges
();
for
(
var
e
in
v_edges
)
{
var
e_id
=
v_edges
[
e
].
id
;
var
a
=
v_edges
[
e
].
source
.
color
;
var
b
=
v_edges
[
e
].
target
.
color
;
a
=
hex2rga
(
a
);
b
=
hex2rga
(
b
);
var
r
=
(
a
[
0
]
+
b
[
0
])
>>
1
;
var
g
=
(
a
[
1
]
+
b
[
1
])
>>
1
;
var
b
=
(
a
[
2
]
+
b
[
2
])
>>
1
;
TW
.
partialGraph
.
_core
.
graph
.
edgesIndex
[
e_id
].
color
=
"rgba("
+
[
r
,
g
,
b
].
join
(
","
)
+
",0.5)"
;
}
repaintEdges
()
// [ / Edge-colour by source-target nodes-colours combination ]
set_ClustersLegend
(
null
)
TW
.
partialGraph
.
refresh
();
TW
.
partialGraph
.
draw
();
TW
.
partialGraph
.
refresh
({
skipIndexation
:
true
});
}
...
...
tinawebJS/sigma_v1.2/sigma.js
View file @
de49b2af
...
...
@@ -11431,7 +11431,7 @@
self
.
dispatchEvent
(
'click'
,
e
.
data
);
nodes
=
getNodes
(
e
);
nodes
=
getNodes
(
e
);
/// <----------- cf. classic tina "targeted"
edges
=
getEdges
(
e
);
if
(
nodes
.
length
)
{
...
...
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