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gargantext
clustering-louvain
Commits
809b749b
Commit
809b749b
authored
Mar 26, 2020
by
Przemyslaw Kaminski
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[FLouvain] fixed point + first step iteration with cond
parent
9b4b5bcb
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27 additions
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+27
-0
Example.hs
src/Data/Graph/Clustering/Example.hs
+7
-0
FLouvain.hs
src/Data/Graph/Clustering/FLouvain.hs
+20
-0
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src/Data/Graph/Clustering/Example.hs
View file @
809b749b
...
...
@@ -47,6 +47,13 @@ runIterations n gr = do
putStrLn
$
show
$
modularity
fgr
iterNextCgr
fgrWeight
return
iterNextCgr
runLouvainFirstStepIterate
::
Int
->
Gr
()
Double
->
(
Modularity
,
CGr
)
runLouvainFirstStepIterate
n
gr
=
(
modularity
fgr
cgr
m
,
cgr
)
where
fgr
=
exampleRemap
gr
cgr
=
louvainFirstStepIterate
n
fgr
m
=
graphWeight
fgr
karate
::
Gr
()
Double
-- karate = mkGraph' <$> importGraphFromGexf "src/Data/karate.gexf"
karate
=
mkGraph
[(
1
,
()
),(
2
,
()
),(
3
,
()
),(
4
,
()
),(
5
,
()
),(
6
,
()
),(
7
,
()
),(
8
,
()
),(
9
,
()
),(
10
,
()
),(
11
,
()
),(
12
,
()
),(
13
,
()
),(
14
,
()
),(
15
,
()
),(
16
,
()
),(
17
,
()
),(
18
,
()
),(
19
,
()
),(
20
,
()
),(
21
,
()
),(
22
,
()
),(
23
,
()
),(
24
,
()
),(
25
,
()
),(
26
,
()
),(
27
,
()
),(
28
,
()
),(
29
,
()
),(
30
,
()
),(
31
,
()
),(
32
,
()
),(
33
,
()
),(
34
,
()
)]
[(
1
,
2
,
1.0
),(
1
,
3
,
1.0
),(
1
,
4
,
1.0
),(
1
,
5
,
1.0
),(
1
,
6
,
1.0
),(
1
,
7
,
1.0
),(
1
,
8
,
1.0
),(
1
,
9
,
1.0
),(
1
,
11
,
1.0
),(
1
,
12
,
1.0
),(
1
,
13
,
1.0
),(
1
,
14
,
1.0
),(
1
,
18
,
1.0
),(
1
,
20
,
1.0
),(
1
,
22
,
1.0
),(
1
,
32
,
1.0
),(
2
,
3
,
1.0
),(
2
,
4
,
1.0
),(
2
,
8
,
1.0
),(
2
,
14
,
1.0
),(
2
,
18
,
1.0
),(
2
,
20
,
1.0
),(
2
,
22
,
1.0
),(
2
,
31
,
1.0
),(
3
,
4
,
1.0
),(
3
,
8
,
1.0
),(
3
,
9
,
1.0
),(
3
,
10
,
1.0
),(
3
,
14
,
1.0
),(
3
,
28
,
1.0
),(
3
,
29
,
1.0
),(
3
,
33
,
1.0
),(
4
,
8
,
1.0
),(
4
,
13
,
1.0
),(
4
,
14
,
1.0
),(
5
,
7
,
1.0
),(
5
,
11
,
1.0
),(
6
,
7
,
1.0
),(
6
,
11
,
1.0
),(
6
,
17
,
1.0
),(
7
,
17
,
1.0
),(
9
,
31
,
1.0
),(
9
,
33
,
1.0
),(
9
,
34
,
1.0
),(
10
,
34
,
1.0
),(
14
,
34
,
1.0
),(
15
,
33
,
1.0
),(
15
,
34
,
1.0
),(
16
,
33
,
1.0
),(
16
,
34
,
1.0
),(
19
,
33
,
1.0
),(
19
,
34
,
1.0
),(
20
,
34
,
1.0
),(
21
,
33
,
1.0
),(
21
,
34
,
1.0
),(
23
,
33
,
1.0
),(
23
,
34
,
1.0
),(
24
,
26
,
1.0
),(
24
,
28
,
1.0
),(
24
,
30
,
1.0
),(
24
,
33
,
1.0
),(
24
,
34
,
1.0
),(
25
,
26
,
1.0
),(
25
,
28
,
1.0
),(
25
,
32
,
1.0
),(
26
,
32
,
1.0
),(
27
,
30
,
1.0
),(
27
,
34
,
1.0
),(
28
,
34
,
1.0
),(
29
,
32
,
1.0
),(
29
,
34
,
1.0
),(
30
,
33
,
1.0
),(
30
,
34
,
1.0
),(
31
,
33
,
1.0
),(
31
,
34
,
1.0
),(
32
,
33
,
1.0
),(
32
,
34
,
1.0
),(
33
,
34
,
1.0
)]
...
...
src/Data/Graph/Clustering/FLouvain.hs
View file @
809b749b
...
...
@@ -49,6 +49,26 @@ import qualified Data.List as DL
data
ClusteringMethod
=
Glue
|
Klue
deriving
(
Eq
)
------------------------------------------------------------------------
-- | Fixed point with at most n iterations
-- 'Int' argument is the maximal number of iterations to make
-- 'a -> a' is the iterator function
-- 'a -> Bool' is the condition checking function ('True' continues looping, 'False' breaks it)
-- 'a' is the initial value
fixPt
::
Int
->
(
a
->
a
)
->
(
a
->
Bool
)
->
a
->
a
fixPt
0
iterator
_
init
=
iterator
init
fixPt
n
iterator
cond
init
=
if
cond
next
then
fixPt
(
n
-
1
)
iterator
cond
init
else
next
where
next
=
iterator
init
-- | Main Louvain first step iteration function
louvainFirstStepIterate
::
Int
->
FGraph
a
b
->
CGr
louvainFirstStepIterate
n
gr
=
fixPt
n
iterator
cond
initCGr
where
initCGr
=
initialCGr
gr
grWeight
=
graphWeight
gr
iterator
cgr
=
iteration
gr
cgr
cond
cgr
=
(
unModularity
$
modularity
gr
cgr
grWeight
)
<
0.1
------------------------------------------------------------------------
-- | Specific FGL needed functions
...
...
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