[flake] update to 9.4.8

flake.nix

@@ -21,7 +21,7 @@
     # to follow haskell.nix's nixpkgs pinned version,
     # but it may be a few months old, so pin it here instead.
     #nixpkgs.follows = "haskell-nix/nixpkgs";
-    nixpkgs.url = "github:NixOS/nixpkgs";
+    nixpkgs.url = "github:NixOS/nixpkgs/nixos-24.05";
     haskell-nix.inputs.nixpkgs.follows = "nixpkgs";
 
     # Convenient Nix Flake utilities, like flake-utils.lib.eachSystem.
@@ -61,25 +61,30 @@
     # See https://gitlab.iscpif.fr/gargantext/haskell-gargantext-prelude/merge_requests/13
     gargantext-prelude = { url = "git+https://gitlab.iscpif.fr/gargantext/haskell-gargantext-prelude.git?ref=303-master-refactoring"; flake = false; };
     haskell-igraph = { url = "git+https://gitlab.iscpif.fr/gargantext/haskell-igraph.git"; flake = false; };
+    haskell-throttle = { url = "git+https://gitlab.iscpif.fr/gargantext/haskell-throttle"; flake = false; };
     hlcm = { url = "git+https://gitlab.iscpif.fr/gargantext/hlcm.git"; flake = false; };
     # WARNING: using the alp/imap-static branch
     hmatrix = { url = "github:alpmestan/hmatrix/alp/imap-static"; flake = false; };
     hsinfomap = { url = "git+https://gitlab.iscpif.fr/gargantext/haskell-infomap.git"; flake = false; };
+    http-reverse-proxy = { url = "github:adinapoli/http-reverse-proxy"; flake = false; };
     iso639 = { url = "git+https://gitlab.iscpif.fr/gargantext/iso639.git"; flake = false; };
     # WARNING: fork of https://github.com/llvm-hs/llvm-hs
     # using adinapoli/llvm-12-ghc-947-compat branch
     # Tracked in: https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/318
     llvm-hs = { url = "github:adinapoli/llvm-hs/adinapoli/llvm-12-ghc-947-compat"; flake = false; };
+    nanomsg-haskell = { url = "git+https://github.com/garganscript/nanomsg-haskell"; flake = false; };
     opaleye-textsearch = { url = "git+https://gitlab.iscpif.fr/gargantext/opaleye-textsearch.git?allRefs=1"; flake = false; };
     openalex = { url = "git+https://gitlab.iscpif.fr/gargantext/crawlers/openalex.git"; flake = false; };
     patches-class = { url = "git+https://gitlab.iscpif.fr/gargantext/patches-class.git"; flake = false; };
     patches-map = { url = "github:delanoe/patches-map"; flake = false; };
     rdf4h = { url = "github:robstewart57/rdf4h"; flake = false; };
     # WARNING: using the more-exports branch
-    servant-job = { url = "github:alpmestan/servant-job/more-exports"; flake = false; };
+    servant-job = { url = "github:adinapoli/servant-job"; flake = false; };
+    servant-routes = { url = "github:fpringle/servant-routes"; flake = false; };
     servant-xml-conduit = { url = "git+https://gitlab.iscpif.fr/gargantext/servant-xml-conduit"; flake = false; };
     # WARNING: using the alp/static branch
     sparse-linear = { url = "github:alpmestan/sparse-linear/alp/static"; flake = false; };
+    toml-parser = { url = "git+https://github.com/glguy/toml-parser/toml-parser-2.0.1.0"; flake = false; };
   };
 
   # For printing the available outputs:
@@ -134,7 +139,7 @@
                 ./cabal.project.freeze
                 ./devops
                 ./ekg-assets
-                ./gargantext-cors-settings.toml
+                #./gargantext-cors-settings.toml
                 ./gargantext.cabal
                 ./test-data
                 (fileFilter (file: lib.any file.hasExt [ "hs" ]) ./bench)
@@ -213,17 +218,20 @@
                   nix/haskell.nix/patches/accelerate-arithmetic/0001-remove-test-using-removed-realBandedGramian.patch
                 ];
                 "https://github.com/alpmestan/hmatrix.git" = inputs.hmatrix;
-                "https://github.com/alpmestan/servant-job.git" = inputs.servant-job;
+                "https://github.com/adinapoli/servant-job.git" = inputs.servant-job;
                 "https://github.com/alpmestan/sparse-linear.git" = inputs.sparse-linear;
                 "https://github.com/chessai/eigen.git" = inputs.eigen;
                 "https://github.com/delanoe/data-time-segment.git" = inputs.data-time-segment;
+                "https://github.com/adinapoli/http-reverse-proxy.git" = inputs.http-reverse-proxy;
                 "https://github.com/delanoe/patches-map" = inputs.patches-map;
                 "https://gitlab.iscpif.fr/gargantext/opaleye-textsearch.git" = inputs.opaleye-textsearch;
                 "https://github.com/robstewart57/rdf4h.git" = inputs.rdf4h;
+                "https://github.com/fpringle/servant-routes.git" = inputs.servant-routes;
                 "https://gitlab.iscpif.fr/amestanogullari/accelerate-utility.git" = inputs.accelerate-utility;
                 "https://gitlab.iscpif.fr/gargantext/crawlers/arxiv-api.git" = inputs.crawlerArxiv;
                 "https://gitlab.iscpif.fr/gargantext/crawlers/epo-proxy-api.git" = inputs.epo-api-client;
                 "https://gitlab.iscpif.fr/gargantext/crawlers/hal.git" = inputs.crawlerHAL;
+                "https://gitlab.iscpif.fr/gargantext/haskell-throttle" = inputs.haskell-throttle;
                 "https://gitlab.iscpif.fr/gargantext/crawlers/isidore.git" = removePackageYaml inputs.crawlerIsidore;
                 "https://gitlab.iscpif.fr/gargantext/crawlers/istex.git" = removePackageYaml inputs.crawlerISTEX;
                 "https://gitlab.iscpif.fr/gargantext/crawlers/openalex.git" = inputs.openalex;
@@ -234,8 +242,12 @@
                 "https://gitlab.iscpif.fr/gargantext/haskell-infomap.git" = inputs.hsinfomap;
                 "https://gitlab.iscpif.fr/gargantext/hlcm.git" = inputs.hlcm;
                 "https://gitlab.iscpif.fr/gargantext/iso639.git" = inputs.iso639;
+                "https://github.com/garganscript/nanomsg-haskell" = inputs.nanomsg-haskell;
                 "https://gitlab.iscpif.fr/gargantext/patches-class.git" = inputs.patches-class;
                 "https://gitlab.iscpif.fr/gargantext/servant-xml-conduit.git" = inputs.servant-xml-conduit;
+
+                # TODO tag used in cabal.project
+                "https://github.com/glguy/toml-parser/toml-parser-2.0.1.0" = inputs.toml-parser;
               };
 
             # Default project configuration.
@@ -426,33 +438,33 @@
             #     $ bat result
             # Note that there may be false positives
             # and that some file location may be wrong.
-            weeder = {
-              packages = ps:
-                haskellLib.selectProjectPackages ps //
-                lib.getAttrs [
-                  "crawlerArxiv"
-                  "crawlerHAL"
-                  "crawlerIsidore"
-                  "crawlerPubMed"
-                  "epo-api-client"
-                  "gargantext-graph"
-                  "gargantext-prelude"
-                ]
-                  ps;
-              # See https://github.com/ocharles/weeder?tab=readme-ov-file#configuration-options
-              settings = {
-                roots = [
-                  "^Main.main$"
-                  # Automatically generated by Cabal
-                  "^Paths_.*"
-                ];
-                root-instances = [
-                ];
-                # Consider all instances of type classes as roots.
-                type-class-roots = true;
-                unused-types = true;
-              };
-            };
+            # weeder = {
+            #   packages = ps:
+            #     haskellLib.selectProjectPackages ps //
+            #     lib.getAttrs [
+            #       "crawlerArxiv"
+            #       "crawlerHAL"
+            #       "crawlerIsidore"
+            #       "crawlerPubMed"
+            #       "epo-api-client"
+            #       "gargantext-graph"
+            #       "gargantext-prelude"
+            #     ]
+            #       ps;
+            #   # See https://github.com/ocharles/weeder?tab=readme-ov-file#configuration-options
+            #   settings = {
+            #     roots = [
+            #       "^Main.main$"
+            #       # Automatically generated by Cabal
+            #       "^Paths_.*"
+            #     ];
+            #     root-instances = [
+            #     ];
+            #     # Consider all instances of type classes as roots.
+            #     type-class-roots = true;
+            #     unused-types = true;
+            #   };
+            # };
 
             # Make some variables available to all project modules
             _module.specialArgs = {
@@ -468,7 +480,7 @@
 
           # project modules
           (import nix/haskell.nix/modules/gargantext.nix)
-          (import nix/haskell.nix/modules/weeder.nix)
+          #(import nix/haskell.nix/modules/weeder.nix)
         ];
 
         projectFlake = project.flake { };
@@ -485,7 +497,7 @@
         # For building a component of this project:
         #     $ nix -L build .#gargantext:exe:gargantext-phylo-profile
         packages = projectFlake.packages // {
-          weeder-analysis = project.args.weeder.analysis;
+          #weeder-analysis = project.args.weeder.analysis;
         };
 
         # For entering the default development shell: