For some reason the default language (namely EN) was ignored when reading
the configuration file. After discussion with anoe, it appears that
this exclusion happens for historical reasons, so this commit removes it.

Now everything is in Core/Config

`gargantext-cli ini` now takes two optional arguments:
- `--ini-path somefile.ini`: will read the configuration from `somefile.ini`.
  Defaults to `gargantext.ini`
- `--toml-path somefile.toml`: will write the configuration converted to TOML
  into `somefile.toml` (warning: it will erase the former file if there is already one!)
  Defaults to `gargantext-settings.toml`

Since it writes to a file, the command no longer outputs the configuration
to standard output.

I moved HasConfig to Core/Config instead of it being in Database.Prelude

Calligraphy generates diagrams based on the code, in PNG format.
Those should not be versioned.

Did a few corrections in the README. Also removed docs from the repository,
since those are now at https://formation.gargantext.org/#/share/Notes/114236

Eventually, Settings will be removed

# Conflicts:
#   bin/update-project-dependencies