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module Gargantext.Components.PhyloExplorer.JSON
( PhyloJSON(..)
, GraphData(..)
, NodeData(..), RawObject(..)
, EdgeData(..), RawEdge(..)
, Cluster(..), PhyloLabel(..)
, Sort(..), Synchrony(..)
, SeaElevation(..), PhyloSimilarity(..)
, TimeUnit(..), ConfigData(..)
, Quality(..)
) where
import Gargantext.Prelude
import Data.Generic.Rep (class Generic)
import Data.Generic.Rep as GR
import Data.Maybe (Maybe)
import Data.Show.Generic (genericShow)
import Gargantext.Utils.SimpleJSON (untaggedSumRep)
import Simple.JSON as JSON
newtype PhyloJSON = PhyloJSON
{ pd_corpusId :: Int
, pd_listId :: Int
, pd_data ::
{ _subgraph_cnt :: Int
, directed :: Boolean
, edges :: Array RawEdge
, objects :: Array RawObject
, strict :: Boolean
| GraphData
}
, pd_config ::
{ clique :: Cluster
, exportLabel :: Array PhyloLabel
, exportSort :: Sort
, phyloSynchrony :: Synchrony
, phyloQuality :: Quality
, seaElevation :: SeaElevation
, similarity :: PhyloSimilarity
, timeUnit :: TimeUnit
| ConfigData
}
}
derive instance Generic PhyloJSON _
derive instance Eq PhyloJSON
instance Show PhyloJSON where show = genericShow
derive newtype instance JSON.ReadForeign PhyloJSON
--------------------------------------------------
type GraphData =
( bb :: String
, color :: String
, fontsize :: String
, label :: String
, labelloc :: String
, lheight :: String
, lp :: String
, lwidth :: String
, name :: String
, nodesep :: String
, overlap :: String
, phyloBranches :: String
, phyloDocs :: String
, phyloFoundations :: String
, phyloGroups :: String
, phyloPeriods :: String
, phyloSources :: String
, phyloTerms :: String
, phyloTimeScale :: String
, rank :: String
, ranksep :: String
, ratio :: String
, splines :: String
, style :: String
)
--------------------------------------------------
type NodeData =
( height :: String
, label :: String
, name :: String
, nodeType :: String
, pos :: String
, shape :: String
, width :: String
)
data RawObject
= GroupToNode
{ _gvid :: Int
, bId :: String
, branchId :: String
, fontname :: String
, foundation :: String
, frequence :: String
, from :: String
, lbl :: String
, penwidth :: String
, role :: String
-- @NOTE #219: not in API; but present in certain data (eg. "Knowledge
-- visualisation")
, seaLvl :: Maybe String
, source :: String
, strFrom :: Maybe String
, strTo :: Maybe String
, support :: String
, to :: String
, weight :: String
| NodeData
}
| BranchToNode
{ _gvid :: Int
, age :: String
, bId :: String
, birth :: String
, branchId :: String
, branch_x :: String
, branch_y :: String
, fillcolor :: String
, fontname :: String
, fontsize :: String
, size :: String
, style :: String
| NodeData
}
| PeriodToNode
{ _gvid :: Int
, fontsize :: String
, from :: String
, strFrom :: Maybe String
, strTo :: Maybe String
, to :: String
| NodeData
}
| Layer
{ _gvid :: Int
, nodes :: Array Int
| GraphData
}
derive instance Generic RawObject _
derive instance Eq RawObject
instance Show RawObject where show = genericShow
instance JSON.ReadForeign RawObject where
readImpl f = GR.to <$> untaggedSumRep f
--------------------------------------------------
type EdgeData =
( color :: String
, head :: Int
, pos :: String
, tail :: Int
, width :: String
)
data RawEdge
= GroupToAncestor
{ _gvid :: Int
, arrowhead :: String
, edgeType :: String
, lbl :: String
, penwidth :: String
, style :: String
| EdgeData
}
| GroupToGroup
{ _gvid :: Int
, constraint :: String
, edgeType :: String
, lbl :: String
, penwidth :: String
| EdgeData
}
| BranchToGroup
{ _gvid :: Int
, arrowhead :: String
, edgeType :: String
| EdgeData
}
| BranchToBranch
{ _gvid :: Int
, arrowhead :: String
, style :: String
| EdgeData
}
| PeriodToPeriod
{ _gvid :: Int
| EdgeData
}
derive instance Generic RawEdge _
derive instance Eq RawEdge
instance Show RawEdge where show = genericShow
instance JSON.ReadForeign RawEdge where
readImpl f = GR.to <$> untaggedSumRep f
--------------------------------------------------
type ConfigData =
( corpusPath :: String
, defaultMode :: Boolean
, findAncestors :: Boolean
, listParser :: String
, listPath :: String
, outputPath :: String
, phyloName :: String
, phyloScale :: Int
)
data Cluster
= Fis
{ _fis_support :: Int
, _fis_size :: Int
}
| MaxClique
{ _mcl_size :: Int
, _mcl_threshold :: Number
, _mcl_filter :: String
}
derive instance Generic Cluster _
derive instance Eq Cluster
instance Show Cluster where show = genericShow
instance JSON.ReadForeign Cluster where
readImpl f = GR.to <$> untaggedSumRep f
data PhyloLabel
= BranchLabel
{ _branch_labelTagger :: String
, _branch_labelSize :: Int
}
| GroupLabel
{ _group_labelTagger :: String
, _group_labelSize :: Int
}
derive instance Generic PhyloLabel _
derive instance Eq PhyloLabel
instance Show PhyloLabel where show = genericShow
instance JSON.ReadForeign PhyloLabel where
readImpl f = GR.to <$> untaggedSumRep f
data Sort = ByBirthDate { _sort_order :: String } | ByHierarchy {_sort_order :: String }
derive instance Generic Sort _
derive instance Eq Sort
instance Show Sort where show = genericShow
instance JSON.ReadForeign Sort where
readImpl f = GR.to <$> untaggedSumRep f
data Synchrony
= ByProximityThreshold
{ _bpt_threshold :: Number
, _bpt_sensibility :: Number
, _bpt_scope :: String
, _bpt_strategy :: String
}
| ByProximityDistribution
{ _bpd_sensibility :: Number
, _bpd_strategy :: String
}
derive instance Generic Synchrony _
derive instance Eq Synchrony
instance Show Synchrony where show = genericShow
instance JSON.ReadForeign Synchrony where
readImpl f = GR.to <$> untaggedSumRep f
data SeaElevation
= Constante
{ _cons_start :: Number
, _cons_gap :: Number
}
| Adaptative
{ _adap_steps :: Number }
| Evolving
{ _evol_neighborhood :: Boolean }
derive instance Generic SeaElevation _
derive instance Eq SeaElevation
instance Show SeaElevation where show = genericShow
instance JSON.ReadForeign SeaElevation where
readImpl f = GR.to <$> untaggedSumRep f
data PhyloSimilarity
= WeightedLogJaccard
{ _wlj_sensibility :: Number
, _wlj_minSharedNgrams :: Int
}
| WeightedLogSim
{ _wls_sensibility :: Number
, _wls_minSharedNgrams :: Int
}
| Hamming
{ _hmg_sensibility :: Number
, _hmg_minSharedNgrams :: Int
}
derive instance Generic PhyloSimilarity _
derive instance Eq PhyloSimilarity
instance Show PhyloSimilarity where show = genericShow
instance JSON.ReadForeign PhyloSimilarity where
readImpl f = GR.to <$> untaggedSumRep f
data TimeUnit
= Epoch
{ _epoch_period :: Int
, _epoch_step :: Int
, _epoch_matchingFrame :: Int
}
| Year
{ _year_period :: Int
, _year_step :: Int
, _year_matchingFrame :: Int
}
| Month
{ _month_period :: Int
, _month_step :: Int
, _month_matchingFrame :: Int
}
| Week
{ _week_period :: Int
, _week_step :: Int
, _week_matchingFrame :: Int
}
| Day
{ _day_period :: Int
, _day_step :: Int
, _day_matchingFrame :: Int
}
derive instance Generic TimeUnit _
derive instance Eq TimeUnit
instance Show TimeUnit where show = genericShow
instance JSON.ReadForeign TimeUnit where
readImpl f = GR.to <$> untaggedSumRep f
data Quality
= Quality
{ _qua_granularity :: Number
, _qua_minBranch :: Int
}
derive instance Generic Quality _
derive instance Eq Quality
instance Show Quality where show = genericShow
instance JSON.ReadForeign Quality where
readImpl f = GR.to <$> untaggedSumRep f