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humanities
gargantext
Commits
47365fdc
Commit
47365fdc
authored
Aug 11, 2017
by
sim
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[FIX] uber-kludge to make newCorpus use normal workflow
parent
c0f5f35e
Changes
7
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7 changed files
with
92 additions
and
43 deletions
+92
-43
gargantext_notebook.py
install/notebook/gargantext_notebook.py
+67
-37
cern.py
moissonneurs/cern.py
+4
-1
hal.py
moissonneurs/hal.py
+4
-1
isidore.py
moissonneurs/isidore.py
+4
-1
istex.py
moissonneurs/istex.py
+4
-1
multivac.py
moissonneurs/multivac.py
+4
-1
pubmed.py
moissonneurs/pubmed.py
+5
-1
No files found.
install/notebook/gargantext_notebook.py
View file @
47365fdc
...
...
@@ -14,11 +14,16 @@ import django
os
.
environ
.
setdefault
(
'DJANGO_SETTINGS_MODULE'
,
'gargantext.settings'
)
django
.
setup
()
from
gargantext.models
import
ProjectNode
,
DocumentNode
from
gargantext.constants
import
QUERY_SIZE_N_MAX
,
get_resource
,
get_resource_by_name
from
gargantext.models
import
ProjectNode
,
DocumentNode
,
UserNode
,
User
from
gargantext.util.db
import
session
,
get_engine
from
collections
import
Counter
import
importlib
from
django.http
import
Http404
class
NotebookError
(
Exception
):
pass
def
documents
(
corpus_id
):
...
...
@@ -64,43 +69,68 @@ def myProject_fromUrl(url):
return
project
def
newCorpus
(
project
,
resourceName
=
11
,
name
=
"Machine learning"
,
query
=
"LSTM"
):
print
(
"Corpus
\"
%
s
\"
in project
\"
%
s
\"
created"
%
(
name
,
project
.
name
))
def
newCorpus
(
project
,
resource
=
11
,
name
=
"Machine learning"
,
query
=
"LSTM"
):
source
=
get_resource
(
resource
)
if
isinstance
(
resource
,
int
)
else
\
get_resource_by_name
(
resource
)
corpus
=
project
.
add_child
(
name
=
"Corpus name"
,
typename
=
'CORPUS'
)
corpus
.
hyperdata
[
"resources"
]
=
[{
"extracted"
:
"true"
,
"type"
:
11
}]
corpus
.
hyperdata
[
"statuses"
]
=
[{
"action"
:
"notebook"
,
"complete"
:
"true"
}]
# [TODO] Add informations needed to get buttons on the Project view.
session
.
add
(
corpus
)
session
.
commit
()
moissonneur_name
=
get_moissonneur_name
(
source
)
if
source
else
\
resource
.
lower
()
hal
=
HalCrawler
()
max_result
=
hal
.
scan_results
(
query
)
paging
=
100
for
page
in
range
(
0
,
max_result
,
paging
):
print
(
"
%
s documents downloaded /
%
s."
%
(
str
(
paging
*
(
page
+
1
)),
str
(
max_result
)
))
docs
=
(
hal
.
_get
(
query
,
fromPage
=
page
,
count
=
paging
)
.
get
(
"response"
,
{})
.
get
(
"docs"
,
[])
)
from
gargantext.util.parsers.HAL
import
HalParser
# [TODO] fix boilerplate for docs here
new_docs
=
HalParser
(
docs
)
.
_parse
(
docs
)
for
doc
in
new_docs
:
new_doc
=
(
corpus
.
add_child
(
name
=
doc
[
"title"
][:
255
]
,
typename
=
'DOCUMENT'
)
)
new_doc
[
"hyperdata"
]
=
doc
session
.
add
(
new_doc
)
session
.
commit
()
print
(
"Extracting the ngrams"
)
parse_extract_indexhyperdata
(
corpus
)
print
(
"Corpus is ready to explore:"
)
print
(
"http://imt.gargantext.org/projects/
%
s/corpora/
%
s/"
%
(
project
.
id
,
corpus
.
id
))
try
:
moissonneur
=
get_moissonneur
(
moissonneur_name
)
except
ImportError
:
raise
NotebookError
(
"Invalid resource identifier:
%
r"
%
resource
)
return
corpus
return
run_moissonneur
(
moissonneur
,
project
,
name
,
query
)
def
get_moissonneur_name
(
ident
):
""" Return moissonneur module name from RESOURCETYPE or crawler name """
# Does it quacks like a RESOURCETYPE ?
if
hasattr
(
ident
,
'get'
):
ident
=
ident
.
get
(
'crawler'
)
# Extract name from crawler class name, otherwise assume ident is already
# a moissonneur name.
if
isinstance
(
ident
,
str
)
and
ident
.
endswith
(
'Crawler'
):
return
ident
[:
-
len
(
'Crawler'
)]
.
lower
()
def
get_moissonneur
(
name
):
""" Return moissonneur module from its name """
if
not
isinstance
(
name
,
str
)
or
not
name
.
islower
():
raise
NotebookError
(
"Invalid moissonneur name:
%
r"
%
name
)
return
importlib
.
import_module
(
'moissonneurs.
%
s'
%
name
)
def
run_moissonneur
(
moissonneur
,
project
,
name
,
query
):
""" Run moissonneur and return resulting corpus """
# XXX Uber-kludge with gory details. Spaghetti rulezzzzz!
class
Dummy
(
object
):
pass
request
=
Dummy
()
request
.
method
=
'POST'
request
.
path
=
'nowhere'
request
.
META
=
{}
request
.
POST
=
{
'string'
:
name
,
'query'
:
query
,
'N'
:
QUERY_SIZE_N_MAX
}
request
.
user
=
(
session
.
query
(
UserNode
)
.
join
(
User
)
.
filter
(
User
.
username
==
'gargantua'
)
.
first
())
try
:
moissonneur
.
query
(
request
)
corpus
=
moissonneur
.
save
(
request
,
project
.
id
,
return_corpus
=
True
)
except
(
ValueError
,
Http404
)
as
e
:
raise
e
# Sometimes strange things happens...
if
corpus
.
name
!=
name
:
corpus
.
name
=
name
session
.
commit
()
return
corpus
moissonneurs/cern.py
View file @
47365fdc
...
...
@@ -30,7 +30,7 @@ def query( request):
#ids = crawlerbot.get_ids(query)
return
JsonHttpResponse
({
"results_nb"
:
crawlerbot
.
results_nb
})
def
save
(
request
,
project_id
):
def
save
(
request
,
project_id
,
return_corpus
=
False
):
'''save'''
if
request
.
method
==
"POST"
:
...
...
@@ -101,6 +101,9 @@ def save(request, project_id):
session
.
rollback
()
# --------------------------------------------
if
return_corpus
:
return
corpus
return
render
(
template_name
=
'pages/projects/wait.html'
,
request
=
request
,
...
...
moissonneurs/hal.py
View file @
47365fdc
...
...
@@ -33,7 +33,7 @@ def query( request):
print
(
results
)
return
JsonHttpResponse
({
"results_nb"
:
crawlerbot
.
results_nb
})
def
save
(
request
,
project_id
):
def
save
(
request
,
project_id
,
return_corpus
=
False
):
'''save'''
if
request
.
method
==
"POST"
:
...
...
@@ -103,6 +103,9 @@ def save(request, project_id):
session
.
rollback
()
# --------------------------------------------
if
return_corpus
:
return
corpus
return
render
(
template_name
=
'pages/projects/wait.html'
,
request
=
request
,
...
...
moissonneurs/isidore.py
View file @
47365fdc
...
...
@@ -29,7 +29,7 @@ def query( request):
#ids = crawlerbot.get_ids(query)
return
JsonHttpResponse
({
"results_nb"
:
crawlerbot
.
results_nb
})
def
save
(
request
,
project_id
):
def
save
(
request
,
project_id
,
return_corpus
=
False
):
'''save'''
if
request
.
method
==
"POST"
:
...
...
@@ -100,6 +100,9 @@ def save(request, project_id):
session
.
rollback
()
# --------------------------------------------
if
return_corpus
:
return
corpus
return
render
(
template_name
=
'pages/projects/wait.html'
,
request
=
request
,
...
...
moissonneurs/istex.py
View file @
47365fdc
...
...
@@ -52,7 +52,7 @@ def query( request ):
def
save
(
request
,
project_id
):
def
save
(
request
,
project_id
,
return_corpus
=
False
):
print
(
"testISTEX:"
)
print
(
request
.
method
)
alist
=
[
"bar"
,
"foo"
]
...
...
@@ -171,6 +171,9 @@ def save(request , project_id):
session
.
rollback
()
# --------------------------------------------
if
return_corpus
:
return
corpus
return
render
(
template_name
=
'pages/projects/wait.html'
,
request
=
request
,
...
...
moissonneurs/multivac.py
View file @
47365fdc
...
...
@@ -33,7 +33,7 @@ def query( request):
print
(
results
)
return
JsonHttpResponse
({
"results_nb"
:
crawlerbot
.
results_nb
})
def
save
(
request
,
project_id
):
def
save
(
request
,
project_id
,
return_corpus
=
False
):
'''save'''
if
request
.
method
==
"POST"
:
...
...
@@ -104,6 +104,9 @@ def save(request, project_id):
session
.
rollback
()
# --------------------------------------------
if
return_corpus
:
return
corpus
return
render
(
template_name
=
'pages/projects/wait.html'
,
request
=
request
,
...
...
moissonneurs/pubmed.py
View file @
47365fdc
...
...
@@ -69,7 +69,7 @@ def query( request ):
return
JsonHttpResponse
(
data
)
def
save
(
request
,
project_id
)
:
def
save
(
request
,
project_id
,
return_corpus
=
False
)
:
# implicit global session
# do we have a valid project id?
try
:
...
...
@@ -164,6 +164,10 @@ def save( request , project_id ) :
session
.
rollback
()
# --------------------------------------------
sleep
(
1
)
if
return_corpus
:
return
corpus
return
HttpResponseRedirect
(
'/projects/'
+
str
(
project_id
))
data
=
alist
...
...
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