[INIT] Init file to execute to begin with Gargantext (change user).

init.py

+# Without this, we couldn't use the Django environment
+
+import os
+os.environ.setdefault("DJANGO_SETTINGS_MODULE", "gargantext_web.settings")
+os.environ.setdefault("DJANGO_HSTORE_GLOBAL_REGISTER", "False")
+
+
+# We're gonna use all the models!
+
+from node.models import *
+
+
+# Reset: all data
+
+tables_to_empty = [
+    Node,
+    Node_Metadata,
+    Metadata,
+    NodeType,
+    ResourceType,
+    Resource,
+]
+for table in tables_to_empty:
+    print('Empty table "%s"...' % (table._meta.db_table, ))
+    table.objects.all().delete()
+
+
+# Integration: metadata types
+
+print('Initialize metadata...')
+metadata = {
+    'publication_date': 'datetime',
+    'authors': 'string',
+    'language_fullname': 'string',
+    'abstract': 'text',
+    'title': 'string',
+    'source': 'string',
+    'volume': 'string',
+    'text': 'text',
+    'date': 'datetime',
+    'page': 'string',
+    'doi': 'string',
+    'journal': 'string',
+}
+for name, type in metadata.items():
+    Metadata(name=name, type=type).save()
+
+
+# Integration: languages
+
+print('Initialize languages...')
+import pycountry
+Language.objects.all().delete()
+for language in pycountry.languages:
+    if 'alpha2' in language.__dict__:
+        Language(
+            iso2 = language.alpha2,
+            iso3 = language.bibliographic,
+            fullname = language.name,
+            implemented = 1 if language.alpha2 in ['en', 'fr'] else 0,
+        ).save()
+
+english = Language.objects.get(iso2='en')
+french  = Language.objects.get(iso2='fr')
+
+
+# Integration: users
+
+print('Initialize users...')
+try:
+    me = User.objects.get(username='alexandre')
+except:
+    me = User(username='alexandre')
+    me.save()
+
+
+# Integration: node types
+
+print('Initialize node types...')
+
+try:
+    typeProject = NodeType.objects.get(name='Root')
+except Exception as error:
+    print(error)
+    typeProject = NodeType(name='Root')
+    typeProject.save()  
+
+try:
+    typeProject = NodeType.objects.get(name='Project')
+except Exception as error:
+    print(error)
+    typeProject = NodeType(name='Project')
+    typeProject.save()  
+
+try:
+    typeCorpus  = NodeType.objects.get(name='Corpus')
+except Exception as error:
+    print(error)
+    typeCorpus  = NodeType(name='Corpus')
+    typeCorpus.save()
+    
+try:
+    typeDoc     = NodeType.objects.get(name='Document')
+except Exception as error:
+    print(error)
+    typeDoc     = NodeType(name='Document')
+    typeDoc.save()
+
+try:
+    typeStem     = NodeType.objects.get(name='Stem')
+except Exception as error:
+    print(error)
+    typeStem     = NodeType(name='Stem')
+    typeStem.save()
+
+try:
+    typeTfidf     = NodeType.objects.get(name='Tfidf')
+except Exception as error:
+    print(error)
+    typeTfidf     = NodeType(name='Tfidf')
+    typeTfidf.save()
+
+try:
+    typeDoc     = NodeType.objects.get(name='WhiteList')
+except Exception as error:
+    print(error)
+    typeDoc     = NodeType(name='WhiteList')
+    typeDoc.save()
+
+try:
+    typeDoc     = NodeType.objects.get(name='BlackList')
+except Exception as error:
+    print(error)
+    typeDoc     = NodeType(name='BlackList')
+    typeDoc.save()
+
+try:
+    typeDoc     = NodeType.objects.get(name='Synonyme')
+except Exception as error:
+    print(error)
+    typeDoc     = NodeType(name='Synonyme')
+    typeDoc.save()
+
+try:
+    typeDoc     = NodeType.objects.get(name='Cooccurrence')
+except Exception as error:
+    print(error)
+    typeDoc     = NodeType(name='Cooccurrence')
+    typeDoc.save()
+
+
+
+# Integration: resource types
+
+print('Initialize resource...')
+try:
+    typePubmed      = ResourceType.objects.get(name='pubmed')
+    typeIsi         = ResourceType.objects.get(name='isi')
+    typeRis         = ResourceType.objects.get(name='ris')
+    typePresseFr    = ResourceType.objects.get(name='europress_french')
+    typePresseEn    = ResourceType.objects.get(name='europress_english')
+
+except Exception as error:
+    print(error)
+    
+    typePubmed = ResourceType(name='pubmed')
+    typePubmed.save()  
+    
+    typeIsi    = ResourceType(name='isi')
+    typeIsi.save()
+    
+    typeRis    = ResourceType(name='ris')
+    typeRis.save()
+    
+    typePresseFr = ResourceType(name='europress_french')
+    typePresseFr.save()
+    
+    typePresseEn = ResourceType(name='europress_english')
+    typePresseEn.save()
+
+# Integration Node Stem
+try:
+    stem = Node.objects.get(name='Stem')
+except:
+    stem = Node(name='Stem', type=typeStem, user=me)
+    stem.save()
+
+
+
+# Integration: project
+
+print('Initialize project...')
+try:
+    project = Node.objects.get(name='Bees project')
+except:
+    project = Node(name='Bees project', type=typeProject, user=me)
+    project.save()
+
+
+# Integration: corpus
+
+print('Initialize corpus...')
+try:
+    corpus_pubmed = Node.objects.get(name='PubMed corpus')
+except:
+    corpus_pubmed = Node(parent=project, name='PubMed corpus', type=typeCorpus, user=me)
+    corpus_pubmed.save()
+
+print('Initialize resource...')
+corpus_pubmed.add_resource(
+    # file='./data_samples/pubmed.zip',
+    #file='./data_samples/pubmed_2013-04-01_HoneyBeesBeeBees.xml',
+    file='/srv/gargantext_lib/data_samples/pubmed.xml',
+    type=typePubmed,
+    user=me
+)
+
+for resource in corpus_pubmed.get_resources():
+    print('Resource #%d - %s - %s' % (resource.id, resource.digest, resource.file))
+    
+print('Parse corpus #%d...' % (corpus_pubmed.id, ))
+corpus_pubmed.parse_resources(verbose=True)
+print('Extract corpus #%d...' % (corpus_pubmed.id, ))
+corpus_pubmed.children.all().extract_ngrams(['title',])
+print('Parsed corpus #%d.' % (corpus_pubmed.id, ))
+
+exit()