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humanities
gargantext
Commits
d5a8e664
Commit
d5a8e664
authored
Dec 10, 2015
by
Romain Loth
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[WIP] importExport: import ~ ok; export à finir
parent
ee9015d3
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importExport.py
ngram/importExport.py
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ngram/importExport.py
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d5a8e664
...
@@ -14,8 +14,15 @@ from ngram.tools import insert_ngrams
...
@@ -14,8 +14,15 @@ from ngram.tools import insert_ngrams
from
analysis.lists
import
WeightedList
,
UnweightedList
from
analysis.lists
import
WeightedList
,
UnweightedList
from
collections
import
defaultdict
from
collections
import
defaultdict
from
csv
import
writer
,
reader
,
QUOTE_MINIMAL
def
exportNgramList
(
node
,
filename
):
def
get_id
(
ngram_terms
):
query
=
session
.
query
(
Ngram
.
id
)
.
filter
(
Ngram
.
terms
==
ngram_terms
)
.
first
()
return
(
query
)
def
exportNgramList
(
node
,
filename
,
delimiter
=
"
\t
"
):
# les nodes couvrant les listes
# les nodes couvrant les listes
# -----------------------------
# -----------------------------
...
@@ -23,92 +30,205 @@ def exportNgramList(node,filename):
...
@@ -23,92 +30,205 @@ def exportNgramList(node,filename):
miam_node
=
get_or_create_node
(
nodetype
=
'MiamList'
,
corpus
=
node
)
miam_node
=
get_or_create_node
(
nodetype
=
'MiamList'
,
corpus
=
node
)
map_node
=
get_or_create_node
(
nodetype
=
'MapList'
,
corpus
=
node
)
map_node
=
get_or_create_node
(
nodetype
=
'MapList'
,
corpus
=
node
)
group_node
=
get_or_create_node
(
nodetype
=
'Group'
,
corpus
=
node
)
group_node
=
get_or_create_node
(
nodetype
=
'Group'
,
corpus
=
node
)
# listes de ngram_ids correspondantes
# listes de ngram_ids correspondantes
# ------------------------------------
# ------------------------------------
#~~ contenu: liste des ids [2562,...]
#~~ contenu: liste des ids [2562,...]
stop_ngram
s
_ids
=
[
stop_ngram
.
ngram_id
for
stop_ngram
in
stop_node
.
node_node_ngram_collection
]
stop_ngram_ids
=
[
stop_ngram
.
ngram_id
for
stop_ngram
in
stop_node
.
node_node_ngram_collection
]
# idem pour miam et map
# idem pour miam et map
miam_ngrams_ids
=
[
miam_ng
.
ngram_id
for
miam_ng
in
miam_node
.
node_node_ngram_collection
]
miam_ngram_ids
=
[
miam_ng
.
ngram_id
for
miam_ng
in
miam_node
.
node_node_ngram_collection
]
map_ngrams_ids
=
[
map_ng
.
ngram_id
for
map_ng
in
map_node
.
node_node_ngram_collection
]
map_ngram_ids
=
[
map_ng
.
ngram_id
for
map_ng
in
map_node
.
node_node_ngram_collection
]
# union des listes (est-elle nécessaire ?)
all_ngrams
=
set
(
set
(
stop_ngrams_ids
)
|
set
(
map_ngrams_ids
)
|
set
(
miam_ngrams_ids
)
)
# pour la group_list on a des couples de ngram_ids
# pour la group_list on a des couples de ngram_ids
# -------------------
# -------------------
# ex: [(3544, 2353), (2787, 4032), ...]
# ex: [(3544, 2353), (2787, 4032), ...]
group_ngram
s
_id_couples
=
[(
nd_ng_ng
.
ngramx_id
,
nd_ng_ng
.
ngramy_id
)
for
nd_ng_ng
in
group_node
.
node_nodengramngram_collection
]
group_ngram_id_couples
=
[(
nd_ng_ng
.
ngramx_id
,
nd_ng_ng
.
ngramy_id
)
for
nd_ng_ng
in
group_node
.
node_nodengramngram_collection
]
# k couples comme set
# k couples comme set
# --------------------
# --------------------
# [(a => x) (a => y)] => [a => {x,y}]
# [(a => x) (a => y)] => [a => {x,y}]
grouped
=
defaultdict
(
set
)
grouped
=
defaultdict
(
set
)
for
ngram
in
group_ngrams
:
for
ngram
in
group_ngram_id_couples
:
# /!\ just in one direction /!\
# a => {x} but not not x => {a}
grouped
[
ngram
[
0
]]
.
add
(
ngram
[
1
])
grouped
[
ngram
[
0
]]
.
add
(
ngram
[
1
])
all_ngrams
.
add
(
ngram
[
0
])
all_ngrams
.
add
(
ngram
[
1
])
toList
=
list
()
# pour récupérer les objets Ngram (avec terme)
# helper func
# -------------------------------
def
ngrams_to_csv_rows
(
ngram_ids
,
id_groupings
=
{},
list_type
=
7
):
# session.query(Ngram).filter(Ngram.id.in_(stop_ngrams_ids)).all()
"""
Table d'infos basiques par ngram :
(ng_id, forme du terme, poids, type_de_liste)
avec une colonne supplémentaire optionnelle:
ngrams groupés avec cet id ex: "4|42"
Retourne une matrice csv_rows en liste de liste
[
[ligne1_colA, ligne1_colB..],
[ligne2_colA, ligne2_colB..],
..
]
(ensuite par exemple csv.writer.writerows(csv_rows)
"""
# récupérer d'un coup les objets Ngram (avec terme)
ng_objs
=
session
.
query
(
Ngram
)
.
filter
(
Ngram
.
id
.
in_
(
ngram_ids
))
.
all
()
# les transcrire en tableau (liste de listes)
csv_rows
=
list
()
for
ng_obj
in
ng_objs
:
ng_id
=
ng_obj
.
id
if
ng_id
in
id_groupings
.
keys
():
this_grouped
=
"|"
.
join
(
str
(
gid
)
for
gid
in
id_groupings
[
ng_id
])
else
:
this_grouped
=
""
# transcription : 5 colonnes
# ID , terme , n , type_de_liste , gid|gid|gid
csv_rows
.
append
(
[
ng_id
,
ng_obj
.
terms
,
ng_obj
.
n
,
list_type
,
this_grouped
]
)
# csv_rows = [[ligne1_a, ligne1_b..],[ligne2_a, ligne2_b..],..]
return
csv_rows
# on applique notre fonction ng_to_csv sur chaque liste
# ------------------------------------------------------
stop_csv_rows
=
ngrams_to_csv_rows
(
stop_ngram_ids
,
id_groupings
=
grouped
,
list_type
=
0
)
# miam contient map donc il y a un préalable ici
miam_without_map
=
[
ng
for
ng
in
miam_ngram_ids
if
ng
not
in
map_ngram_ids
]
miam_csv_rows
=
ngrams_to_csv_rows
(
miam_without_map
,
id_groupings
=
grouped
,
list_type
=
1
)
map_csv_rows
=
ngrams_to_csv_rows
(
map_ngram_ids
,
id_groupings
=
grouped
,
list_type
=
2
)
# all lists together now
this_corpus_all_rows
=
stop_csv_rows
+
miam_csv_rows
+
map_csv_rows
# output
with
open
(
filename
,
'w'
)
as
out_file
:
# csv.writer()
csv_wr
=
writer
(
out_file
,
delimiter
=
delimiter
,
quoting
=
QUOTE_MINIMAL
)
# write to outfile
csv_wr
.
writerows
(
this_corpus_all_rows
)
# in_ => OUTER JOIN préalable ?
#~ def add_ngram(fromList, toList=toList, grouplist=grouped, all_ngrams=all_ngrams, weight=0):
#~ for ngram_id in from_list:
#~ all_ngrams.add(ngram_id)
#~ if ngram_id in grouplist.keys():
#~ ngrams.append((ngram_id, grouped[ngram_id], weight))
#~ else :
#~ ngram.append((ngram_id, "", weight))
#~
#~ add_ngrams(stop_ngrams, weight=0)
#~ add_ngrams(miam_ngrams, weight=1)
#~ add_ngrams(map_ngrams, weight=2)
# to csv
with
open
(
filename
,
"w"
)
as
f
:
for
ngram
in
ngrams
:
f
.
write
(
ngram
)
def
importNgramList
(
node
,
filename
):
def
importNgramList
(
node
,
filename
,
delimiter
=
"
\t
"
,
modify_lists
=
[
0
,
1
,
2
]
):
'''
'''
Suppose
Suppose une table CSV avec colonnes comme dans fonction export.
/!
\
efface et remplace les listes existantes /!
\
/!
\
(supprime leur collection de NodeNgrams) /!
\
'''
'''
list_types_shortcuts
=
{
0
:
"StopList"
,
1
:
"MiamList"
,
2
:
"MapList"
,
}
# on supprime tous les NodeNgrams des listes à modifier
# ------------------------------------------------------
for
list_shortcut
in
modify_lists
:
# find previous listnode id
list_type
=
list_types_shortcuts
[
list_shortcut
]
list_node
=
get_or_create_node
(
nodetype
=
list_type
,
corpus
=
node
)
node_id
=
listnode
.
id
# delete previous lists
session
.
query
(
NodeNgram
)
.
filter
(
NodeNgram
.
node_id
==
list_node
.
id
)
.
delete
()
session
.
commit
()
# on lit le CSV
# --------------
ngrams_csv_rows
=
[]
with
open
(
filename
,
"r"
)
as
f
:
with
open
(
filename
,
"r"
)
as
f
:
ngrams_list
=
f
.
read
()
.
splitlines
()
ngrams_csv_rows
=
reader
(
f
,
delimiter
=
delimiter
,
quoting
=
QUOTE_MINIMAL
)
all_read_terms
=
list
()
# for row delete others and
stop_words
=
set
(
stop_list
)
stop_ids
=
insert_ngrams
([(
word
,
len
(
word
.
split
(
' '
)))
for
word
in
stop_words
])
stop_node
=
get_or_create_node
(
nodetype
=
'StopList'
,
corpus
=
node
)
session
.
add
(
stop_node
)
for
csv_row
in
ngrams_csv_rows
:
session
.
commit
()
this_ng_id
=
csv_row
[
0
]
this_ng_terms
=
csv_row
[
1
]
this_ng_nlen
=
csv_row
[
2
]
this_ng_list_type_id
=
csv_row
[
3
]
this_ng_grouped_ngs
=
csv_row
[
4
]
# --- quelle liste cible ?
# par ex: "MiamList"
list_type
=
type_ids_cache
[
this_ng_list_type_id
]
tgt_list_node
=
get_or_create_node
(
nodetype
=
list_type
,
corpus
=
node
)
# --- test 1: forme existante dans node_ngram ?
#preexisting = session.query(Ngram).filter(Ngram.terms == this_ng_terms).first()
#if preexisting is None:
# # todo ajouter Ngram dans la table node_ngram
# avec un nouvel ID
# --- test 2: forme déjà dans une liste ?
#if preexisting is not None:
# # premier node de type "liste" mentionnant ce ngram_id
# #
# node_ngram = preexisting.node_node_ngram_collection[0]
# previous_list = node_ngram.node_id
#
# ---------------
data
[
0
]
=
tgt_list_node
.
id
data
[
1
]
=
this_ng_id
# on suppose le même ngram_id
data
[
2
]
=
size
=
len
(
list
(
stop_words
))
size
=
len
(
list
(
stop_words
))
data
=
zip
(
[
stop_node
.
id
for
i
in
range
(
0
,
size
)]
,
[
stop_ids
[
word
]
for
word
in
list
(
stop_words
)]
,
[
-
1
for
i
in
range
(
0
,
size
)]
)
bulk_insert
(
NodeNgram
,
[
'node_id'
,
'ngram_id'
,
'weight'
],
[
d
for
d
in
data
])
bulk_insert
(
NodeNgram
,
[
'node_id'
,
'ngram_id'
,
'weight'
],
[
d
for
d
in
data
])
# bulk_insert(NodeNgramNgram, ['node_id', 'ngramx_id', 'ngramy_id', 'weight'], [d for d in data])
# lecture des ngrams préexistants
# ------------------
# Remarque quand on a un list_node li alors faire:
# li.node_node_ngram_collection
# (donne tous les node_ngram)
# (plus rapide que lancer une nouvelle session.query)
#
# TODO utiliser carrément :
# [w.node_ngram for w in listnode.node_node_ngram_collection]
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