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humanities
gargantext
Commits
e04e0b51
Commit
e04e0b51
authored
Jul 08, 2016
by
Romain Loth
Browse files
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[FEAT] new compact format for graph service <=> explorer exchanges
parent
33de2f36
Changes
3
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Inline
Side-by-side
Showing
3 changed files
with
133 additions
and
62 deletions
+133
-62
rest.py
graph/rest.py
+27
-2
main.js
static/lib/graphExplorer/tinawebJS/main.js
+6
-5
sigma.parseCustom.js
static/lib/graphExplorer/tinawebJS/sigma.parseCustom.js
+100
-55
No files found.
graph/rest.py
View file @
e04e0b51
...
...
@@ -14,12 +14,37 @@ def compress_graph(graphdata):
"nodes": [{"id":4103, "type":"terms", "attributes":{"clust_default": 0}, "size":29, "label":"regard"},...]
"links": [{"t": 998,"s": 768,"w": 0.0425531914893617},...]
To send this data over the net, this function can reduce
some
of its size:
To send this data over the net, this function can reduce
a lot
of its size:
- keep less decimals for float value of each link's weight
- (TODO) have shorter names for node properties (eg: s/clust_default/cd/)
- use shorter names for node properties (eg: s/clust_default/cl/)
result format:
"nodes": [{"id":4103, "at":{"cl": 0}, "s":29, "lb":"regard"},...]
"links": [{"t": 998,"s": 768,"w": 0.042},...]
"""
for
link
in
graphdata
[
'links'
]:
link
[
'w'
]
=
format
(
link
[
'w'
],
'.3f'
)
# keep only 3 decimals
for
node
in
graphdata
[
'nodes'
]:
node
[
'lb'
]
=
node
[
'label'
]
del
node
[
'label'
]
node
[
'at'
]
=
node
[
'attributes'
]
del
node
[
'attributes'
]
node
[
'at'
][
'cl'
]
=
node
[
'at'
][
'clust_default'
]
del
node
[
'at'
][
'clust_default'
]
node
[
's'
]
=
node
[
'size'
]
del
node
[
'size'
]
if
node
[
'type'
]
==
"terms"
:
# its the default type for our format: so we don't need it
del
node
[
'type'
]
else
:
node
[
't'
]
=
node
[
'type'
]
del
node
[
'type'
]
return
graphdata
# TODO check authentication
...
...
static/lib/graphExplorer/tinawebJS/main.js
View file @
e04e0b51
...
...
@@ -74,9 +74,11 @@ var file = (Array.isArray(mainfile))?mainfile[0]:mainfile;
$
.
ajax
({
url
:
file
,
success
:
function
(
data
,
textStatus
,
jqXHR
)
{
header
=
jqXHR
.
getResponseHeader
(
"Content-Type"
)
header
=
(
header
)?
"json"
:
"gexf"
;
Result
=
{
"format"
:
header
,
"data"
:
data
};
var
format
=
'gexf'
// default value
var
header
=
jqXHR
.
getResponseHeader
(
"Content-Type"
)
if
(
header
.
indexOf
(
"application/json"
)
!=
-
1
)
format
=
'compactjson'
Result
=
{
"format"
:
format
,
"data"
:
data
};
MainFunction
(
Result
)
},
error
:
function
(
exception
)
{
...
...
@@ -142,11 +144,10 @@ function MainFunction( RES ) {
fileparam
=
file
;
}
// Reading just a JSON|GEXF
// Reading just a JSON|
COMPACTJSON|
GEXF
if
(
file
!=
"db.json"
&&
file
!=
"api.json"
)
fileparam
=
RES
[
"format"
];
start
=
new
ParseCustom
(
fileparam
,
the_data
);
categories
=
start
.
scanFile
();
//user should choose the order of categories
pr
(
"Categories: "
)
...
...
static/lib/graphExplorer/tinawebJS/sigma.parseCustom.js
View file @
e04e0b51
...
...
@@ -20,17 +20,20 @@ ParseCustom = function ( format , data ) {
}
// output = [ nodes, edges, nodes1, ... ]
// input = JSONstring
this
.
getJSONCategories
=
function
(
json
)
{
this
.
getJSONCategories
=
function
(
json
,
formatDetails
)
{
this
.
data
=
json
;
return
scanJSON
(
this
.
data
);
return
scanJSON
(
this
.
data
,
formatDetails
);
}
// output = [ "cat1" , "cat2" , ...]
// input = [ "cat1" , "cat2" , ...]
this
.
parseJSON
=
function
(
categories
)
{
return
dictfyJSON
(
this
.
data
,
categories
);
this
.
parseJSON
=
function
(
categories
,
formatDetails
)
{
var
isCompact
=
false
if
(
formatDetails
=
'compactjson'
)
{
isCompact
=
true
}
return
dictfyJSON
(
this
.
data
,
categories
,
isCompact
);
}
// output = [ nodes, edges, nodes1, ... ]
};
...
...
@@ -45,8 +48,9 @@ ParseCustom.prototype.scanFile = function() {
pr
(
"scanFile: "
+
this
.
format
)
break
;
case
"json"
:
case
"compactjson"
:
pr
(
"scanFile: "
+
this
.
format
)
categories
=
this
.
getJSONCategories
(
this
.
data
);
categories
=
this
.
getJSONCategories
(
this
.
data
,
this
.
format
);
return
categories
;
break
;
case
"gexf"
:
...
...
@@ -63,6 +67,7 @@ ParseCustom.prototype.scanFile = function() {
// Level-02
ParseCustom
.
prototype
.
makeDicts
=
function
(
categories
)
{
console
.
log
(
'FUN t.sigma.parseCustom:makeDicts'
)
console
.
warn
(
"this.format:"
,
this
.
format
)
switch
(
this
.
format
)
{
case
"api.json"
:
pr
(
"makeDicts: "
+
this
.
format
)
...
...
@@ -71,8 +76,9 @@ ParseCustom.prototype.makeDicts = function(categories) {
pr
(
"makeDicts: "
+
this
.
format
)
break
;
case
"json"
:
case
"compactjson"
:
pr
(
"makeDicts: "
+
this
.
format
)
dictionaries
=
this
.
parseJSON
(
categories
);
dictionaries
=
this
.
parseJSON
(
categories
,
this
.
format
);
return
dictionaries
;
break
;
case
"gexf"
:
...
...
@@ -475,49 +481,55 @@ function dictfyGexf( gexf , categories ) {
}
// Level-00
function
scanJSON
(
data
)
{
function
scanJSON
(
data
,
format
)
{
console
.
log
(
'FUN t.sigma.parseCustom:scanJSON'
)
var
categoriesDict
=
{},
categories
=
[];
var
nodes
=
data
.
nodes
;
for
(
var
i
in
nodes
)
{
n
=
nodes
[
i
];
if
(
n
.
type
)
categoriesDict
[
n
.
type
]
=
n
.
type
;
}
for
(
var
cat
in
categoriesDict
)
categories
.
push
(
cat
);
if
(
format
==
"json"
)
{
for
(
var
i
in
nodes
)
{
n
=
nodes
[
i
];
// eg n.type = 'terms'
if
(
n
.
type
)
categoriesDict
[
n
.
type
]
=
n
.
type
;
}
for
(
var
cat
in
categoriesDict
)
categories
.
push
(
cat
);
var
catDict
=
{}
if
(
categories
.
length
==
0
)
{
categories
[
0
]
=
"Document"
;
catDict
[
"Document"
]
=
0
;
}
if
(
categories
.
length
==
1
)
{
catDict
[
categories
[
0
]]
=
0
;
}
if
(
categories
.
length
>
1
)
{
var
newcats
=
[]
for
(
var
i
in
categories
)
{
c
=
categories
[
i
]
if
(
c
.
indexOf
(
"term"
)
==-
1
)
{
// NOT a term-category
newcats
[
0
]
=
c
;
catDict
[
c
]
=
0
;
}
else
{
newcats
[
1
]
=
c
;
// IS a term-category
catDict
[
c
]
=
1
;
var
catDict
=
{}
if
(
categories
.
length
==
0
)
{
categories
[
0
]
=
"Document"
;
catDict
[
"Document"
]
=
0
;
}
if
(
categories
.
length
==
1
)
{
catDict
[
categories
[
0
]]
=
0
;
}
if
(
categories
.
length
>
1
)
{
var
newcats
=
[]
for
(
var
i
in
categories
)
{
c
=
categories
[
i
]
if
(
c
.
indexOf
(
"term"
)
==-
1
)
{
// NOT a term-category
newcats
[
0
]
=
c
;
catDict
[
c
]
=
0
;
}
else
{
newcats
[
1
]
=
c
;
// IS a term-category
catDict
[
c
]
=
1
;
}
}
categories
=
newcats
;
}
categories
=
newcats
;
}
else
if
(
format
==
"compactjson"
)
{
categories
=
[
'terms'
]
}
// eg : ['terms']
return
categories
;
}
// Level-00
// for {1,2}partite graphs
function
dictfyJSON
(
data
,
categories
)
{
function
dictfyJSON
(
data
,
categories
,
isCompact
)
{
console
.
log
(
'FUN t.sigma.parseCustom:dictfyJSON'
)
console
.
clear
()
console
.
log
(
"IN DICTIFY JSON"
)
...
...
@@ -531,25 +543,58 @@ function dictfyJSON( data , categories ) {
nodes2
=
{},
bipartiteD2N
=
{},
bipartiteN2D
=
{}
}
for
(
var
i
in
data
.
nodes
)
{
n
=
data
.
nodes
[
i
];
node
=
{}
node
.
id
=
n
.
id
;
node
.
label
=
(
n
.
label
)?
n
.
label
+
""
:
(
"node_"
+
n
.
id
)
;
node
.
size
=
(
n
.
size
)?
Math
.
log
(
n
.
size
+
1
)
:
3
;
node
.
type
=
(
n
.
type
)?
n
.
type
:
"Document"
;
node
.
x
=
(
n
.
x
)?
n
.
x
:
Math
.
random
();
node
.
y
=
(
n
.
y
)?
n
.
y
:
Math
.
random
();
node
.
color
=
(
n
.
color
)?
n
.
color
:
"#FFFFFF"
;
if
(
n
.
shape
)
node
.
shape
=
n
.
shape
;
node
.
attributes
=
(
n
.
attributes
)?
n
.
attributes
:[];
node
.
type
=
(
n
.
type
)?
n
.
type
:
categories
[
0
]
;
// node.shape = "square";
if
(
!
catCount
[
node
.
type
])
catCount
[
node
.
type
]
=
0
catCount
[
node
.
type
]
++
;
nodes
[
n
.
id
]
=
node
;
// old case with longer names (format == "json")
if
(
!
isCompact
)
{
for
(
var
i
in
data
.
nodes
)
{
n
=
data
.
nodes
[
i
];
node
=
{}
node
.
id
=
n
.
id
;
node
.
label
=
(
n
.
label
)?
n
.
label
+
""
:
(
"node_"
+
n
.
id
)
;
node
.
size
=
(
n
.
size
)?
Math
.
log
(
n
.
size
+
1
)
:
3
;
// node.type = (n.type)? n.type : "Document" ;
node
.
x
=
(
n
.
x
)?
n
.
x
:
Math
.
random
();
node
.
y
=
(
n
.
y
)?
n
.
y
:
Math
.
random
();
node
.
color
=
(
n
.
color
)?
n
.
color
:
"#FFFFFF"
;
if
(
n
.
shape
)
node
.
shape
=
n
.
shape
;
node
.
attributes
=
(
n
.
attributes
)?
n
.
attributes
:[];
node
.
type
=
(
n
.
type
)?
n
.
type
:
categories
[
0
]
;
// node.shape = "square";
if
(
!
catCount
[
node
.
type
])
catCount
[
node
.
type
]
=
0
catCount
[
node
.
type
]
++
;
nodes
[
n
.
id
]
=
node
;
}
}
// case for shorter names (format == "compactjson")
else
{
for
(
var
i
in
data
.
nodes
)
{
n
=
data
.
nodes
[
i
];
node
=
{}
node
.
id
=
n
.
id
;
node
.
label
=
(
n
.
lb
)?
n
.
lb
+
""
:
(
"node_"
+
n
.
id
)
;
node
.
size
=
(
n
.
s
)?
Math
.
log
(
n
.
s
+
1
)
:
3
;
node
.
x
=
(
n
.
x
)?
n
.
x
:
Math
.
random
();
node
.
y
=
(
n
.
y
)?
n
.
y
:
Math
.
random
();
node
.
color
=
(
n
.
col
)?
n
.
col
:
"#FFFFFF"
;
if
(
n
.
shape
)
node
.
shape
=
n
.
shape
;
node
.
attributes
=
[];
if
(
n
.
at
)
{
for
(
var
attr
in
n
.
at
)
{
if
(
attr
==
'cl'
)
node
.
attributes
[
'clust_default'
]
=
n
.
at
.
cl
else
node
.
attributes
[
attr
]
=
n
.
at
[
attr
]
}
}
node
.
type
=
(
n
.
t
)?
n
.
t
:
categories
[
0
]
;
// node.shape = "square";
if
(
!
catCount
[
node
.
type
])
catCount
[
node
.
type
]
=
0
catCount
[
node
.
type
]
++
;
nodes
[
n
.
id
]
=
node
;
}
}
colorList
.
sort
(
function
(){
return
Math
.
random
()
-
0.5
;
});
...
...
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