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Julien Moutinho
haskell-gargantext
Commits
a458c7a0
Commit
a458c7a0
authored
2 years ago
by
Alexandre Delanoë
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[CLEAN] Tools Graph
parent
7442b3e6
dev
162-dev-ghc-9.4
162-dev-haskell-9.2
175-dev-doc-table-count
177-welcome-door-to-enter-the-project
184-dev-add-nlp-to-gargantext-ini
184-dev-add-support-for-multiple-languages-in-ini-file
186-dev-ngrams-score-fixes
190-dev-framecalc-async-fix
191-dev-list-upload-fixes
193-dev-api-query-dev-fix
199-dev-materialized-view-refresh-issue
201-dev-user-pubmed-api-key
203-dev-corpus-json-import
205-dev-ethercalc-codimd-doc-upload
206-dev-phylo
213-dev-implement-json-errors
217-dev-ngrams-patch
233-dev-terms-dates
239-readme-test-reinstall-project-with-cabal-and-update-the-readme-file
239-readme-test-reinstall-project-with-cabal-and-update-the-readme-file-2
244-dev-cabal-dependencies-versions
244-dev-hal-language-fix-for-abstracts
244-dev-stack2cabal
250-dev-fix-corpus-hyperdata-update
259-dev-security-fixes
260-readme-add-note-about-libraries-devlopment
263-node-content-breadcrumb-display-the-full-path-of-a-node-as-a-breadcrumb-with-each-clickable-parent
272-dev-fixes-for-node-score
274-dev-more-protolude-in-prelude
275-dev-date-split-fix
280-dev-xml-code-cleanup
281-dev-ngrams-fixes
506-dev-search-in-tree
506-dev-tree-search-fix
513-dev-pin-tree
548-dev-reverse-url-search
551-dev-graphql-contexts-ngrams
561-dev-document-date
571-dev-node-corpus-api-search-fixes
571-dev-node-corpus-api-search-fixes-take-2
582-dev-node-phylo-init
592-dev-document-upload-abstract
594-dev-ngrams-click-fixes
596-dev-ngrams-initial-sync-fix
603-dev-istex-zip-file-upload
adinapoli/developer-guidelines
adinapoli/disable-policy-checks
adinapoli/fix-datafield-instance
adinapoli/fix-phylo-types
adinapoli/fix-scheduler
adinapoli/hotfix-for-datafield-json-instance
adinapoli/improve-cabal
adinapoli/improve-cabal-ci-caching
adinapoli/improve-cabal-old
adinapoli/investigate-issue-192
adinapoli/issue-182
adinapoli/issue-185-job-api
adinapoli/issue-185-job-api-part-2
adinapoli/issue-188
adinapoli/issue-198
adinapoli/issue-198-part-2
adinapoli/issue-217
adinapoli/issue-226
adinapoli/issue-250
adinapoli/issue-252
adinapoli/issue-258
adinapoli/issue-258-part-2
adinapoli/issue-259
adinapoli/issue-259-design-1
adinapoli/issue-261
adinapoli/issue-267
adinapoli/issue-267-part-2
adinapoli/issue-267-part-3
adinapoli/issue-273
adinapoli/issue-273-part-2
adinapoli/issue-276
adinapoli/issue-279
adinapoli/issue-284
adinapoli/issue-incorrect-pagination
adinapoli/more-db-test-coverage
adinapoli/raw-query-to-pubmed
adinapoli/restore-ci
adinapoli/try-stack2cabal
dev-250-addChineze
dev-593-pubmed-api-key
dev-bipartite
dev-contributing
dev-epo-integration
dev-epo-patents
dev-fix-broken-pure-refactor
dev-iramuteq
dev-merge
dev-no-freeze
dev-openalex
dev-order2
dev-phylo
dev-phyloDebug
dev-treedebug
dev-typeclasses-refactoring
developer-guidelines
mailmap
nix
revert-0b51636b
stable
testing
0.0.6.9.9.9.3.1
0.0.6.9.9.9.3
0.0.6.9.9.9.2
0.0.6.9.9.9.1
0.0.6.9.9.9
0.0.6.9.9.8.3.4
0.0.6.9.9.8.3.3
0.0.6.9.9.8.3.2
0.0.6.9.9.8.3.1
0.0.6.9.9.8.3
0.0.6.9.9.8.2
0.0.6.9.9.8.1
0.0.6.9.9.8
0.0.6.9.9.7.9
0.0.6.9.9.7.8
0.0.6.9.9.7.7
0.0.6.9.9.7.6.4
0.0.6.9.9.7.6.3
0.0.6.9.9.7.6.2
0.0.6.9.9.7.6.1
0.0.6.9.9.7.6
0.0.6.9.9.7.5.1
0.0.6.9.9.7.5
0.0.6.9.9.7.4
0.0.6.9.9.7.3
0.0.6.9.9.7.2
0.0.6.9.9.7.1
0.0.6.9.9.7
0.0.6.9.9.6.9
0.0.6.9.9.6.8
0.0.6.9.9.6.7
0.0.6.9.9.6.6
0.0.6.9.9.6.5
0.0.6.9.9.6.4
0.0.6.9.9.6.3
0.0.6.9.9.6.2
0.0.6.9.9.6.1
0.0.6.9.9.6
0.0.6.9.9.5.8
0.0.6.9.9.5.7
0.0.6.9.9.5.6
0.0.6.9.9.5.5
0.0.6.9.9.5.4
0.0.6.9.9.5.3
0.0.6.9.9.5.2
0.0.6.9.9.5.1
0.0.6.9.9.5
0.0.6.9.9.4.6
0.0.6.9.9.4.5
0.0.6.9.9.4.4
0.0.6.9.9.4.3
0.0.6.9.9.4.2
0.0.6.9.9.4.1
0.0.6.9.9.4
0.0.6.9.9.3.3
0.0.6.9.9.3.2
0.0.6.9.9.3.1
0.0.6.9.9.3
0.0.6.9.9.2
0.0.6.9.9.1
0.0.6.9.9
0.0.6.9.8.7.1
0.0.6.9.8.7
0.0.6.9.8.6.2
0.0.6.9.8.6.1
0.0.6.9.8.6
0.0.6.9.8.5.1
0.0.6.9.8.5
0.0.6.9.8.4
0.0.6.9.8.3
0.0.6.9.8.2.2
0.0.6.9.8.2.1
0.0.6.9.8.2
0.0.6.9.8.1
0.0.6.9.8
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-32
gargantext.cabal
gargantext.cabal
+1
-1
Tools.hs
src/Gargantext/Core/Viz/Graph/Tools.hs
+1
-31
No files found.
gargantext.cabal
View file @
a458c7a0
...
...
@@ -5,7 +5,7 @@ cabal-version: 1.12
-- see: https://github.com/sol/hpack
name: gargantext
version: 0.0.6.9.7.6
version:
0.0.6.9.7.6
synopsis: Search, map, share
description: Please see README.md
category: Data
...
...
This diff is collapsed.
Click to expand it.
src/Gargantext/Core/Viz/Graph/Tools.hs
View file @
a458c7a0
...
...
@@ -117,12 +117,11 @@ cooc2graphWith' :: Partitions
->
Strength
->
HashMap
(
NgramsTerm
,
NgramsTerm
)
Int
->
IO
Graph
cooc2graphWith'
_doPartitions
_bridgenessMethod
multi
similarity
@
Conditional
threshold
strength
myCooc
=
do
cooc2graphWith'
_doPartitions
_bridgenessMethod
multi
similarity
threshold
strength
myCooc
=
do
let
(
distanceMap
,
diag
,
ti
)
=
doSimilarityMap
similarity
threshold
strength
myCooc
distanceMap
`
seq
`
diag
`
seq
`
ti
`
seq
`
return
()
partitions
<-
if
(
Map
.
size
distanceMap
>
0
)
-- then recursiveClustering doPartitions distanceMap
then
recursiveClustering'
(
spinglass'
1
)
distanceMap
else
panic
$
Text
.
unlines
[
"[Gargantext.C.V.Graph.Tools] Similarity Matrix is empty"
,
"Maybe you should add more Map Terms in your list"
...
...
@@ -133,35 +132,7 @@ cooc2graphWith' _doPartitions _bridgenessMethod multi similarity@Conditional thr
let
!
confluence'
=
BAC
.
computeConfluences
3
(
Map
.
keys
distanceMap
)
True
!
bridgeness'
=
bridgeness
(
Bridgeness_Recursive
partitions
1.0
similarity
)
distanceMap
{-
!bridgeness' = if bridgenessMethod == BridgenessMethod_Basic
then bridgeness (Bridgeness_Basic partitions 1.0) distanceMap
else bridgeness (Bridgeness_Advanced similarity confluence') distanceMap
-}
pure
$
data2graph
multi
ti
diag
bridgeness'
confluence'
(
setNodes2clusterNodes
$
List
.
concat
partitions
)
cooc2graphWith'
_doPartitions
_bridgenessMethod
multi
similarity
@
Distributional
threshold
strength
myCooc
=
do
let
(
distanceMap
,
diag
,
ti
)
=
doSimilarityMap
Distributional
threshold
strength
myCooc
distanceMap
`
seq
`
diag
`
seq
`
ti
`
seq
`
return
()
partitions
<-
if
(
Map
.
size
distanceMap
>
0
)
--then recursiveClustering doPartitions distanceMap
then
recursiveClustering'
(
spinglass'
1
)
distanceMap
else
panic
$
Text
.
unlines
[
"[Gargantext.C.V.Graph.Tools] Similarity Matrix is empty"
,
"Maybe you should add more Map Terms in your list"
,
"Tutorial: TODO"
]
length
partitions
`
seq
`
return
()
let
!
confluence'
=
BAC
.
computeConfluences
3
(
Map
.
keys
distanceMap
)
True
!
bridgeness'
=
bridgeness
(
Bridgeness_Recursive
partitions
1.0
similarity
)
distanceMap
{-
!bridgeness' = if bridgenessMethod == BridgenessMethod_Basic
then bridgeness (Bridgeness_Basic partitions 1.0) distanceMap
else bridgeness (Bridgeness_Advanced Distributional confluence') distanceMap
pure $ data2graph multi ti diag bridgeness' confluence' partitions
-}
pure
$
data2graph
multi
ti
diag
bridgeness'
confluence'
(
setNodes2clusterNodes
$
List
.
concat
partitions
)
...
...
@@ -239,7 +210,6 @@ nodeTypeWith (MultiPartite (Partite s1 t1) (Partite _s2 t2)) t =
then
t1
else
t2
data2graph
::
MultiPartite
->
Map
NgramsTerm
Int
->
Map
(
Int
,
Int
)
Occurrences
...
...
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