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Julien Moutinho
haskell-gargantext
Commits
cadd8650
Commit
cadd8650
authored
Dec 09, 2018
by
Alexandre Delanoë
Browse files
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Merge branch 'tsvector'
parents
d22876cb
50585129
Changes
31
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31 changed files
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629 additions
and
476 deletions
+629
-476
package.yaml
package.yaml
+3
-7
Ngrams.hs
src/Gargantext/API/Ngrams.hs
+2
-2
Node.hs
src/Gargantext/API/Node.hs
+3
-5
Main.hs
src/Gargantext/Core/Types/Main.hs
+0
-1
Bashql.hs
src/Gargantext/Database/Bashql.hs
+2
-2
Facet.hs
src/Gargantext/Database/Facet.hs
+7
-151
Flow.hs
src/Gargantext/Database/Flow.hs
+6
-5
Pairing.hs
src/Gargantext/Database/Flow/Pairing.hs
+2
-2
Utils.hs
src/Gargantext/Database/Flow/Utils.hs
+3
-3
Instances.hs
src/Gargantext/Database/Instances.hs
+0
-50
Children.hs
src/Gargantext/Database/Node/Children.hs
+4
-3
Contact.hs
src/Gargantext/Database/Node/Contact.hs
+1
-1
Add.hs
src/Gargantext/Database/Node/Document/Add.hs
+1
-1
Insert.hs
src/Gargantext/Database/Node/Document/Insert.hs
+1
-1
Queries.hs
src/Gargantext/Database/Queries.hs
+0
-83
Filter.hs
src/Gargantext/Database/Queries/Filter.hs
+34
-0
Join.hs
src/Gargantext/Database/Queries/Join.hs
+201
-0
Root.hs
src/Gargantext/Database/Root.hs
+4
-4
Ngrams.hs
src/Gargantext/Database/Schema/Ngrams.hs
+8
-7
Node.hs
src/Gargantext/Database/Schema/Node.hs
+149
-84
NodeNgram.hs
src/Gargantext/Database/Schema/NodeNgram.hs
+3
-3
NodeNgramsNgrams.hs
src/Gargantext/Database/Schema/NodeNgramsNgrams.hs
+3
-3
NodeNode.hs
src/Gargantext/Database/Schema/NodeNode.hs
+3
-3
NodeNodeNgram.hs
src/Gargantext/Database/Schema/NodeNodeNgram.hs
+2
-2
User.hs
src/Gargantext/Database/Schema/User.hs
+2
-2
TextSearch.hs
src/Gargantext/Database/TextSearch.hs
+69
-9
Node.hs
src/Gargantext/Database/Types/Node.hs
+76
-20
Utils.hs
src/Gargantext/Database/Utils.hs
+36
-19
Flow.hs
src/Gargantext/Text/Flow.hs
+1
-1
Phylo.hs
src/Gargantext/Viz/Phylo.hs
+1
-1
stack.yaml
stack.yaml
+2
-1
No files found.
package.yaml
View file @
cadd8650
name
:
gargantext
version
:
'
4.0.0.
2
'
version
:
'
4.0.0.
3
'
synopsis
:
Search, map, share
description
:
Please see README.md
category
:
Data
...
...
@@ -36,12 +36,8 @@ library:
-
Gargantext.Core.Types.Main
-
Gargantext.Core.Utils.Prefix
-
Gargantext.Database
-
Gargantext.Database.Bashql
-
Gargantext.Database.Node.Document.Insert
-
Gargantext.Database.Node.Document.Add
-
Gargantext.Database.Node.Contact
-
Gargantext.Database.Types.Node
-
Gargantext.Database.User
-
Gargantext.Database.Flow
-
Gargantext.Database.Schema.Node
-
Gargantext.Database.Cooc
-
Gargantext.Database.Tree
-
Gargantext.Prelude
...
...
src/Gargantext/API/Ngrams.hs
View file @
cadd8650
...
...
@@ -34,7 +34,7 @@ module Gargantext.API.Ngrams
where
import
Prelude
(
round
)
-- import Gargantext.Database.User (UserId)
-- import Gargantext.Database.
Schema.
User (UserId)
import
Data.Patch.Class
(
Replace
,
replace
)
--import qualified Data.Map.Strict.Patch as PM
import
Data.Monoid
...
...
@@ -57,7 +57,7 @@ import GHC.Generics (Generic)
--import Gargantext.Core.Types.Main (Tree(..))
import
Gargantext.Core.Utils.Prefix
(
unPrefix
)
import
Gargantext.Database.Types.Node
(
NodeType
(
..
))
import
qualified
Gargantext.Database.Ngrams
as
Ngrams
import
qualified
Gargantext.Database.
Schema.
Ngrams
as
Ngrams
import
Gargantext.Prelude
import
Gargantext.Core.Types
(
ListType
(
..
),
ListId
,
CorpusId
)
import
Prelude
(
Enum
,
Bounded
,
minBound
,
maxBound
)
...
...
src/Gargantext/API/Node.hs
View file @
cadd8650
...
...
@@ -51,15 +51,13 @@ import Servant
import
Gargantext.API.Ngrams
(
TabType
(
..
),
TableNgramsApi
,
TableNgramsApiGet
,
tableNgramsPatch
,
getTableNgrams
,
NgramsIdPatchsFeed
,
NgramsIdPatchsBack
,
NgramsTable
)
import
Gargantext.Prelude
import
Gargantext.Database.Types.Node
import
Gargantext.Database.Node
(
runCmd
,
getNodesWithParentId
,
getNode
,
deleteNode
,
deleteNodes
,
mk
,
JSONB
)
import
Gargantext.Database.Utils
(
runCmd
)
import
Gargantext.Database.Schema.Node
(
getNodesWithParentId
,
getNode
,
deleteNode
,
deleteNodes
,
mk
,
JSONB
)
import
Gargantext.Database.Node.Children
(
getChildren
)
import
qualified
Gargantext.Database.Node.Update
as
U
(
update
,
Update
(
..
))
import
Gargantext.Database.Facet
(
FacetDoc
,
runViewDocuments'
,
OrderBy
(
..
),
FacetChart
,
runViewAuthorsDoc
)
import
Gargantext.Database.Tree
(
treeDB
,
HasTreeError
(
..
),
TreeError
(
..
))
import
Gargantext.Database.NodeNode
(
nodesToFavorite
,
nodesToTrash
)
import
Gargantext.Database.
Schema.
NodeNode
(
nodesToFavorite
,
nodesToTrash
)
-- Graph
--import Gargantext.Text.Flow
import
Gargantext.Viz.Graph
(
Graph
,
readGraphFromJson
,
defaultGraph
)
...
...
src/Gargantext/Core/Types/Main.hs
View file @
cadd8650
...
...
@@ -21,7 +21,6 @@ Portability : POSIX
module
Gargantext.Core.Types.Main
where
------------------------------------------------------------------------
import
Prelude
(
Enum
,
Bounded
,
minBound
,
maxBound
)
import
Data.Aeson
(
FromJSON
,
ToJSON
,
toJSON
)
import
Data.Aeson
as
A
...
...
src/Gargantext/Database/Bashql.hs
View file @
cadd8650
...
...
@@ -80,8 +80,8 @@ import Data.Text (Text)
import
Data.List
(
concat
,
last
)
import
Gargantext.Core.Types
import
Gargantext.Database.Utils
(
connectGargandb
)
import
Gargantext.Database.Node
import
Gargantext.Database.Utils
(
connectGargandb
,
Cmd
(
..
),
runCmd
,
mkCmd
)
import
Gargantext.Database.
Schema.
Node
import
qualified
Gargantext.Database.Node.Update
as
U
(
Update
(
..
),
update
)
import
Gargantext.Prelude
...
...
src/Gargantext/Database/Facet.hs
View file @
cadd8650
...
...
@@ -33,7 +33,6 @@ import Data.Aeson (FromJSON, ToJSON)
import
Data.Aeson.TH
(
deriveJSON
)
import
Data.Either
(
Either
(
Left
))
import
Data.Maybe
(
Maybe
)
import
Data.Profunctor.Product.Default
import
Data.Profunctor.Product.TH
(
makeAdaptorAndInstance
)
import
Data.Swagger
import
Data.Text
(
Text
)
...
...
@@ -44,14 +43,14 @@ import GHC.Generics (Generic)
import
Gargantext.Core.Types
import
Gargantext.Core.Utils.Prefix
(
unPrefix
)
import
Gargantext.Database.Config
(
nodeTypeId
)
import
Gargantext.Database.Ngrams
import
Gargantext.Database.Node
import
Gargantext.Database.NodeNgram
import
Gargantext.Database.NodeNode
import
Gargantext.Database.Queries
import
Gargantext.Database.Schema.Ngrams
import
Gargantext.Database.Schema.Node
import
Gargantext.Database.Schema.NodeNgram
import
Gargantext.Database.Schema.NodeNode
import
Gargantext.Database.Utils
import
Gargantext.Database.Queries.Join
import
Gargantext.Database.Queries.Filter
import
Opaleye
import
Opaleye.Internal.Join
(
NullMaker
)
import
Prelude
(
Enum
,
Bounded
,
minBound
,
maxBound
)
import
Prelude
hiding
(
null
,
id
,
map
,
sum
,
not
,
read
)
import
Servant.API
import
Test.QuickCheck
(
elements
)
...
...
@@ -193,8 +192,6 @@ queryAuthorsDoc = leftJoin5 queryNodeTable queryNodeNgramTable queryNgramsTable
cond45
(
contact
,
(
nodeNgram2
,
(
_
,
(
_
,
_
))))
=
_node_id
contact
.==
nodeNgram_NodeNgramNodeId
nodeNgram2
------------------------------------------------------------------------
runViewDocuments
::
CorpusId
->
Trash
->
Maybe
Offset
->
Maybe
Limit
->
Maybe
OrderBy
->
Cmd
[
FacetDoc
]
...
...
@@ -238,144 +235,3 @@ filterDocuments o l order q = limit' l $ offset' o $ orderBy ordering q
(
Just
FavDesc
)
->
desc
facetDoc_favorite
_
->
desc
facetDoc_created
------------------------------------------------------------------------
-- | TODO move this queries utilties elsewhere
leftJoin3'
::
Query
(
NodeRead
,
(
NodeNodeReadNull
,
NodeReadNull
))
leftJoin3'
=
leftJoin3
queryNodeNodeTable
queryNodeTable
queryNodeTable
cond12
cond23
where
cond12
=
undefined
cond23
::
(
NodeRead
,
(
NodeNodeRead
,
NodeReadNull
))
->
Column
PGBool
cond23
=
undefined
leftJoin3
::
(
Default
Unpackspec
columnsL1
columnsL1
,
Default
Unpackspec
columnsL2
columnsL2
,
Default
Unpackspec
columnsL3
columnsL3
,
Default
Unpackspec
nullableColumnsL2
nullableColumnsL2
,
Default
NullMaker
columnsL2
nullableColumnsL2
,
Default
NullMaker
(
columnsL1
,
nullableColumnsL2
)
nullableColumnsL3
)
=>
Query
columnsL1
->
Query
columnsL2
->
Query
columnsL3
->
((
columnsL1
,
columnsL2
)
->
Column
PGBool
)
->
((
columnsL3
,
(
columnsL1
,
nullableColumnsL2
))
->
Column
PGBool
)
->
Query
(
columnsL3
,
nullableColumnsL3
)
leftJoin3
q1
q2
q3
cond12
cond23
=
leftJoin
q3
(
leftJoin
q1
q2
cond12
)
cond23
--{-
leftJoin4'
::
Query
(
NodeRead
,
(
NodeReadNull
,
(
NodeReadNull
,
NodeReadNull
)))
leftJoin4'
=
leftJoin4
queryNodeTable
queryNodeTable
queryNodeTable
queryNodeTable
cond12
cond23
cond34
where
cond12
=
undefined
cond23
::
(
NodeRead
,
(
NodeRead
,
NodeReadNull
))
->
Column
PGBool
cond23
=
undefined
cond34
::
(
NodeRead
,
(
NodeRead
,
(
NodeReadNull
,
NodeReadNull
)))
->
Column
PGBool
cond34
=
undefined
leftJoin4
::
(
Default
Unpackspec
fieldsL1
fieldsL1
,
Default
Unpackspec
fieldsL2
fieldsL2
,
Default
Unpackspec
fieldsL3
fieldsL3
,
Default
Unpackspec
fieldsR
fieldsR
,
Default
Unpackspec
nullableFieldsL1
nullableFieldsL1
,
Default
Unpackspec
nullableFieldsL2
nullableFieldsL2
,
Default
NullMaker
fieldsR
nullableFieldsL2
,
Default
NullMaker
(
fieldsL2
,
nullableFieldsL1
)
nullableFieldsL3
,
Default
NullMaker
(
fieldsL3
,
nullableFieldsL2
)
nullableFieldsL1
)
=>
Query
fieldsL3
->
Query
fieldsR
->
Query
fieldsL2
->
Query
fieldsL1
->
((
fieldsL3
,
fieldsR
)
->
Column
PGBool
)
->
((
fieldsL2
,
(
fieldsL3
,
nullableFieldsL2
))
->
Column
PGBool
)
->
((
fieldsL1
,
(
fieldsL2
,
nullableFieldsL1
))
->
Column
PGBool
)
->
Query
(
fieldsL1
,
nullableFieldsL3
)
leftJoin4
q1
q2
q3
q4
cond12
cond23
cond34
=
leftJoin
q4
(
leftJoin
q3
(
leftJoin
q1
q2
cond12
)
cond23
)
cond34
--}
{-
-}
leftJoin5'
::
Query
(
NodeRead
,
(
NodeReadNull
,
(
NodeReadNull
,
(
NodeReadNull
,
NodeReadNull
))))
leftJoin5'
=
leftJoin5
queryNodeTable
queryNodeTable
queryNodeTable
queryNodeTable
queryNodeTable
cond12
cond23
cond34
cond45
where
cond12
::
(
NodeRead
,
NodeRead
)
->
Column
PGBool
cond12
=
undefined
cond23
::
(
NodeRead
,
(
NodeRead
,
NodeReadNull
))
->
Column
PGBool
cond23
=
undefined
cond34
::
(
NodeRead
,
(
NodeRead
,
(
NodeReadNull
,
NodeReadNull
)))
->
Column
PGBool
cond34
=
undefined
cond45
::
(
NodeRead
,
(
NodeRead
,
(
NodeReadNull
,
(
NodeReadNull
,
NodeReadNull
))))
->
Column
PGBool
cond45
=
undefined
leftJoin5
::
(
Default
Unpackspec
fieldsL1
fieldsL1
,
Default
Unpackspec
fieldsL2
fieldsL2
,
Default
Unpackspec
nullableFieldsR1
nullableFieldsR1
,
Default
Unpackspec
fieldsL3
fieldsL3
,
Default
Unpackspec
nullableFieldsR2
nullableFieldsR2
,
Default
Unpackspec
fieldsL4
fieldsL4
,
Default
Unpackspec
nullableFieldsR3
nullableFieldsR3
,
Default
Unpackspec
fieldsR
fieldsR
,
Default
NullMaker
fieldsR
nullableFieldsR3
,
Default
NullMaker
(
fieldsL2
,
nullableFieldsR1
)
nullableFieldsR4
,
Default
NullMaker
(
fieldsL3
,
nullableFieldsR2
)
nullableFieldsR1
,
Default
NullMaker
(
fieldsL4
,
nullableFieldsR3
)
nullableFieldsR2
)
=>
Query
fieldsR
->
Query
fieldsL4
->
Query
fieldsL3
->
Query
fieldsL2
->
Query
fieldsL1
->
((
fieldsL4
,
fieldsR
)
->
Column
PGBool
)
->
((
fieldsL3
,
(
fieldsL4
,
nullableFieldsR3
))
->
Column
PGBool
)
->
((
fieldsL2
,
(
fieldsL3
,
nullableFieldsR2
))
->
Column
PGBool
)
->
((
fieldsL1
,
(
fieldsL2
,
nullableFieldsR1
))
->
Column
PGBool
)
->
Query
(
fieldsL1
,
nullableFieldsR4
)
leftJoin5
q1
q2
q3
q4
q5
cond12
cond23
cond34
cond45
=
leftJoin
q5
(
leftJoin
q4
(
leftJoin
q3
(
leftJoin
q2
q1
cond12
)
cond23
)
cond34
)
cond45
leftJoin6
::
(
Default
Unpackspec
fieldsL1
fieldsL1
,
Default
Unpackspec
fieldsL2
fieldsL2
,
Default
Unpackspec
nullableFieldsR1
nullableFieldsR1
,
Default
Unpackspec
fieldsL3
fieldsL3
,
Default
Unpackspec
nullableFieldsR2
nullableFieldsR2
,
Default
Unpackspec
fieldsL4
fieldsL4
,
Default
Unpackspec
nullableFieldsR3
nullableFieldsR3
,
Default
Unpackspec
fieldsL5
fieldsL5
,
Default
Unpackspec
nullableFieldsR4
nullableFieldsR4
,
Default
Unpackspec
fieldsR
fieldsR
,
Default
NullMaker
fieldsR
nullableFieldsR4
,
Default
NullMaker
(
fieldsL2
,
nullableFieldsR1
)
nullableFieldsR5
,
Default
NullMaker
(
fieldsL3
,
nullableFieldsR2
)
nullableFieldsR1
,
Default
NullMaker
(
fieldsL4
,
nullableFieldsR3
)
nullableFieldsR2
,
Default
NullMaker
(
fieldsL5
,
nullableFieldsR4
)
nullableFieldsR3
)
=>
Query
fieldsR
->
Query
fieldsL5
->
Query
fieldsL4
->
Query
fieldsL3
->
Query
fieldsL2
->
Query
fieldsL1
->
((
fieldsL5
,
fieldsR
)
->
Column
PGBool
)
->
((
fieldsL4
,
(
fieldsL5
,
nullableFieldsR4
))
->
Column
PGBool
)
->
((
fieldsL3
,
(
fieldsL4
,
nullableFieldsR3
))
->
Column
PGBool
)
->
((
fieldsL2
,
(
fieldsL3
,
nullableFieldsR2
))
->
Column
PGBool
)
->
((
fieldsL1
,
(
fieldsL2
,
nullableFieldsR1
))
->
Column
PGBool
)
->
Query
(
fieldsL1
,
nullableFieldsR5
)
leftJoin6
q1
q2
q3
q4
q5
q6
cond12
cond23
cond34
cond45
cond56
=
leftJoin
q6
(
leftJoin
q5
(
leftJoin
q4
(
leftJoin
q3
(
leftJoin
q2
q1
cond12
)
cond23
)
cond34
)
cond45
)
cond56
src/Gargantext/Database/Flow.hs
View file @
cadd8650
...
...
@@ -27,17 +27,18 @@ import qualified Data.Map as DM
import
Gargantext.Core.Types
(
NodePoly
(
..
),
ListType
(
..
),
listTypeId
)
import
Gargantext.Database.Bashql
(
runCmd'
)
-- , del)
import
Gargantext.Database.Config
(
userMaster
,
userArbitrary
,
corpusMasterName
)
import
Gargantext.Database.Ngrams
(
insertNgrams
,
Ngrams
(
..
),
NgramsT
(
..
),
NgramsIndexed
(
..
),
indexNgramsT
,
NgramsType
(
..
),
text2ngrams
)
import
Gargantext.Database.
Node
(
mkRoot
,
mkCorpus
,
Cmd
(
..
)
,
mkList
,
mkGraph
,
mkDashboard
,
mkAnnuaire
,
getCorporaWithParentId'
)
import
Gargantext.Database.
Schema.
Ngrams
(
insertNgrams
,
Ngrams
(
..
),
NgramsT
(
..
),
NgramsIndexed
(
..
),
indexNgramsT
,
NgramsType
(
..
),
text2ngrams
)
import
Gargantext.Database.
Schema.Node
(
mkRoot
,
mkCorpus
,
mkList
,
mkGraph
,
mkDashboard
,
mkAnnuaire
,
getCorporaWithParentId'
)
import
Gargantext.Database.Root
(
getRootCmd
)
import
Gargantext.Database.Types.Node
(
NodeType
(
..
),
NodeId
)
import
Gargantext.Database.Node.Document.Add
(
add
)
import
Gargantext.Database.Node.Document.Insert
(
insertDocuments
,
ReturnId
(
..
),
addUniqIdsDoc
,
addUniqIdsContact
,
ToDbData
(
..
))
import
Gargantext.Database.NodeNgram
(
NodeNgramPoly
(
..
),
insertNodeNgrams
)
import
Gargantext.Database.NodeNgramsNgrams
(
NodeNgramsNgramsPoly
(
..
),
insertNodeNgramsNgramsNew
)
import
Gargantext.Database.
Schema.
NodeNgram
(
NodeNgramPoly
(
..
),
insertNodeNgrams
)
import
Gargantext.Database.
Schema.
NodeNgramsNgrams
(
NodeNgramsNgramsPoly
(
..
),
insertNodeNgramsNgramsNew
)
import
Gargantext.Database.Types.Node
(
HyperdataDocument
(
..
))
import
Gargantext.Database.Utils
(
Cmd
(
..
))
--import Gargantext.Database.Node.Contact (HyperdataContact(..))
import
Gargantext.Database.User
(
getUser
,
UserLight
(
..
))
import
Gargantext.Database.
Schema.
User
(
getUser
,
UserLight
(
..
))
import
Gargantext.Core.Types.Individu
(
Username
)
import
Gargantext.Ext.IMT
(
toSchoolName
)
import
Gargantext.Ext.IMTUser
(
deserialiseImtUsersFromFile
)
...
...
src/Gargantext/Database/Flow/Pairing.hs
View file @
cadd8650
...
...
@@ -31,12 +31,12 @@ import qualified Data.Map as DM
import
Data.Text
(
Text
,
toLower
)
import
qualified
Data.Text
as
DT
import
Gargantext.Prelude
hiding
(
sum
)
import
Gargantext.Database.Ngrams
-- (NgramsType(..))
import
Gargantext.Database.
Schema.
Ngrams
-- (NgramsType(..))
--import Gargantext.Database.Node.Contact -- (HyperdataContact(..))
--import Gargantext.Database.Types.Node -- (Hyperdata(..))
import
Gargantext.Database.Node.Contact
import
Gargantext.Database.Flow.Utils
import
Gargantext.Database.
Node
(
Cmd
,
mkCmd
)
import
Gargantext.Database.
Utils
(
Cmd
,
mkCmd
)
import
Gargantext.Database.Node.Children
import
Gargantext.Core.Types.Main
import
Gargantext.Core.Types
(
NodeType
(
..
))
...
...
src/Gargantext/Database/Flow/Utils.hs
View file @
cadd8650
...
...
@@ -18,10 +18,10 @@ module Gargantext.Database.Flow.Utils
import
Data.Map
(
Map
)
import
qualified
Data.Map
as
DM
import
Gargantext.Prelude
import
Gargantext.Database.Ngrams
import
Gargantext.Database.
Schema.
Ngrams
import
Gargantext.Database.Types.Node
(
NodeId
,
Node
,
NodePoly
(
..
),
Hyperdata
)
import
Gargantext.Database.
Node
--
(Cmd)
import
Gargantext.Database.NodeNgram
import
Gargantext.Database.
Utils
(
Cmd
)
import
Gargantext.Database.
Schema.
NodeNgram
toMaps
::
Hyperdata
a
=>
(
a
->
Map
(
NgramsT
Ngrams
)
Int
)
->
[
Node
a
]
->
Map
(
NgramsT
Ngrams
)
(
Map
NodeId
Int
)
toMaps
fun
ns
=
mapNodeIdNgrams
$
documentIdWithNgrams
fun
ns'
...
...
src/Gargantext/Database/Instances.hs
deleted
100644 → 0
View file @
d22876cb
{-|
Module : Gargantext.Database.Instances
Description :
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
Maintainer : team@gargantext.org
Stability : experimental
Portability : POSIX
Here is a longer description of this module, containing some
commentary with @some markup@.
-}
{-# OPTIONS_GHC -fno-warn-orphans #-}
{-# LANGUAGE FlexibleInstances #-}
{-# LANGUAGE MultiParamTypeClasses #-}
{-# LANGUAGE NoImplicitPrelude #-}
module
Gargantext.Database.Instances
where
import
Gargantext.Prelude
import
Data.Text
(
Text
)
import
Data.Time
(
UTCTime
)
import
Opaleye
(
PGInt4
,
PGTimestamptz
,
PGFloat8
,
QueryRunnerColumnDefault
,
queryRunnerColumnDefault
,
fieldQueryRunnerColumn
,
Nullable
,
PGText
)
instance
QueryRunnerColumnDefault
PGInt4
Integer
where
queryRunnerColumnDefault
=
fieldQueryRunnerColumn
instance
QueryRunnerColumnDefault
PGFloat8
(
Maybe
Double
)
where
queryRunnerColumnDefault
=
fieldQueryRunnerColumn
instance
QueryRunnerColumnDefault
PGInt4
(
Maybe
Int
)
where
queryRunnerColumnDefault
=
fieldQueryRunnerColumn
instance
QueryRunnerColumnDefault
PGTimestamptz
(
Maybe
UTCTime
)
where
queryRunnerColumnDefault
=
fieldQueryRunnerColumn
instance
QueryRunnerColumnDefault
(
Nullable
PGInt4
)
Int
where
queryRunnerColumnDefault
=
fieldQueryRunnerColumn
instance
QueryRunnerColumnDefault
(
Nullable
PGText
)
Text
where
queryRunnerColumnDefault
=
fieldQueryRunnerColumn
src/Gargantext/Database/Node/Children.hs
View file @
cadd8650
...
...
@@ -20,10 +20,11 @@ module Gargantext.Database.Node.Children where
import
Database.PostgreSQL.Simple
(
Connection
)
import
Opaleye
import
Gargantext.Core.Types
import
Gargantext.Database.Node
import
Gargantext.Database.NodeNode
import
Gargantext.Database.Schema.Node
import
Gargantext.Database.Utils
import
Gargantext.Database.Schema.NodeNode
import
Gargantext.Database.Config
(
nodeTypeId
)
import
Gargantext.Database.Queries
import
Gargantext.Database.Queries
.Filter
import
Gargantext.Database.Node.Contact
(
HyperdataContact
)
import
Control.Arrow
(
returnA
)
...
...
src/Gargantext/Database/Node/Contact.hs
View file @
cadd8650
...
...
@@ -29,7 +29,7 @@ import Database.PostgreSQL.Simple.FromField (FromField, fromField)
import
GHC.Generics
(
Generic
)
import
Gargantext.Core.Utils.Prefix
(
unPrefix
)
import
Gargantext.Core.Types.Main
(
AnnuaireId
,
UserId
)
import
Gargantext.Database.Node
(
NodeWrite
'
,
Name
,
node
)
import
Gargantext.Database.
Schema.
Node
(
NodeWrite
'
,
Name
,
node
)
import
Gargantext.Database.Types.Node
(
Node
,
Hyperdata
,
NodeType
(
..
))
import
Gargantext.Database.Utils
(
fromField'
)
import
Gargantext.Prelude
...
...
src/Gargantext/Database/Node/Document/Add.hs
View file @
cadd8650
...
...
@@ -32,7 +32,7 @@ import Database.PostgreSQL.Simple.Types (Values(..), QualifiedIdentifier(..))
import
Data.Text
(
Text
)
import
Gargantext.Database.
Node
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Database.
Utils
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Database.Types.Node
import
Gargantext.Prelude
...
...
src/Gargantext/Database/Node/Document/Insert.hs
View file @
cadd8650
...
...
@@ -74,7 +74,7 @@ import Database.PostgreSQL.Simple.ToRow (ToRow(..))
import
Database.PostgreSQL.Simple.Types
(
Values
(
..
),
QualifiedIdentifier
(
..
))
import
GHC.Generics
(
Generic
)
import
Gargantext.Database.Config
(
nodeTypeId
)
import
Gargantext.Database.
Node
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Database.
Utils
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Database.Node.Contact
-- (HyperdataContact(..), ContactWho(..))
import
Gargantext.Database.Types.Node
import
Gargantext.Prelude
...
...
src/Gargantext/Database/Queries.hs
deleted
100644 → 0
View file @
d22876cb
{-|
Module : Gargantext.Database.Queries
Description : Main requests of Node to the database
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
Maintainer : team@gargantext.org
Stability : experimental
Portability : POSIX
-}
{-# OPTIONS_GHC -fno-warn-name-shadowing #-}
{-# LANGUAGE Arrows #-}
{-# LANGUAGE DeriveGeneric #-}
{-# LANGUAGE FlexibleInstances #-}
{-# LANGUAGE FunctionalDependencies #-}
{-# LANGUAGE MultiParamTypeClasses #-}
{-# LANGUAGE NoImplicitPrelude #-}
{-# LANGUAGE TemplateHaskell #-}
{-# OPTIONS_GHC -fno-warn-orphans #-}
module
Gargantext.Database.Queries
where
import
Gargantext.Prelude
import
Gargantext.Core.Types
(
Limit
,
Offset
,
NodePoly
)
import
Data.Maybe
(
Maybe
,
maybe
)
import
Control.Arrow
((
>>>
))
import
Control.Applicative
((
<*>
))
import
Opaleye
-- (Query, limit, offset)
type
NodeWrite
=
NodePoly
(
Maybe
(
Column
PGInt4
))
(
Column
PGInt4
)
(
Column
PGInt4
)
(
Column
(
Nullable
PGInt4
))
(
Column
(
PGText
))
(
Maybe
(
Column
PGTimestamptz
))
(
Column
PGJsonb
)
-- (Maybe (Column PGTSVector))
type
NodeRead
=
NodePoly
(
Column
PGInt4
)
(
Column
PGInt4
)
(
Column
PGInt4
)
(
Column
(
Nullable
PGInt4
))
(
Column
(
PGText
))
(
Column
PGTimestamptz
)
(
Column
PGJsonb
)
-- (Column PGTSVector)
type
NodeReadNull
=
NodePoly
(
Column
(
Nullable
PGInt4
))
(
Column
(
Nullable
PGInt4
))
(
Column
(
Nullable
PGInt4
))
(
Column
(
Nullable
PGInt4
))
(
Column
(
Nullable
PGText
))
(
Column
(
Nullable
PGTimestamptz
))
(
Column
(
Nullable
PGJsonb
))
join3
::
Query
columnsA
->
Query
columnsB
->
Query
columnsC
->
((
columnsA
,
columnsB
,
columnsC
)
->
Column
PGBool
)
->
Query
(
columnsA
,
columnsB
,
columnsC
)
join3
q1
q2
q3
cond
=
((,,)
<$>
q1
<*>
q2
<*>
q3
)
>>>
keepWhen
cond
--leftJoin3 :: Query columnsL1 -> Query columnsR -> Query columnsL
-- -> ((columnsL1, columnsR) -> Column PGBool)
-- -> ((columnsL, (columnsL1, nullableColumnsR1)) -> Column PGBool)
-- -> Query (columnsL, nullableColumnsR)
--leftJoin3 q1 q2 q3 cond12 cond23 = leftJoin q3 (leftJoin q1 q2 cond12) cond23
limit'
::
Maybe
Limit
->
Query
a
->
Query
a
limit'
maybeLimit
query
=
maybe
query
(
\
l
->
limit
l
query
)
maybeLimit
offset'
::
Maybe
Offset
->
Query
a
->
Query
a
offset'
maybeOffset
query
=
maybe
query
(
\
o
->
offset
o
query
)
maybeOffset
src/Gargantext/Database/Queries/Filter.hs
0 → 100644
View file @
cadd8650
{-|
Module : Gargantext.Database.Queries.Filter
Description : Main requests of Node to the database
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
Maintainer : team@gargantext.org
Stability : experimental
Portability : POSIX
-}
{-# OPTIONS_GHC -fno-warn-name-shadowing #-}
{-# LANGUAGE Arrows #-}
{-# LANGUAGE DeriveGeneric #-}
{-# LANGUAGE FlexibleInstances #-}
{-# LANGUAGE FunctionalDependencies #-}
{-# LANGUAGE MultiParamTypeClasses #-}
{-# LANGUAGE NoImplicitPrelude #-}
{-# LANGUAGE TemplateHaskell #-}
{-# OPTIONS_GHC -fno-warn-orphans #-}
module
Gargantext.Database.Queries.Filter
where
import
Gargantext.Core.Types
(
Limit
,
Offset
)
import
Data.Maybe
(
Maybe
,
maybe
)
import
Opaleye
(
Query
,
limit
,
offset
)
limit'
::
Maybe
Limit
->
Query
a
->
Query
a
limit'
maybeLimit
query
=
maybe
query
(
\
l
->
limit
l
query
)
maybeLimit
offset'
::
Maybe
Offset
->
Query
a
->
Query
a
offset'
maybeOffset
query
=
maybe
query
(
\
o
->
offset
o
query
)
maybeOffset
src/Gargantext/Database/Queries/Join.hs
0 → 100644
View file @
cadd8650
{-|
Module : Gargantext.Database.Queries.Join
Description : Main requests of Node to the database
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
Maintainer : team@gargantext.org
Stability : experimental
Portability : POSIX
-}
{-# OPTIONS_GHC -fno-warn-orphans #-}
{-# OPTIONS_GHC -fno-warn-name-shadowing #-}
{-# LANGUAGE Arrows #-}
{-# LANGUAGE DeriveGeneric #-}
{-# LANGUAGE FlexibleContexts #-}
{-# LANGUAGE FlexibleInstances #-}
{-# LANGUAGE FunctionalDependencies #-}
{-# LANGUAGE MultiParamTypeClasses #-}
{-# LANGUAGE QuasiQuotes #-}
{-# LANGUAGE NoImplicitPrelude #-}
{-# LANGUAGE NoMonomorphismRestriction #-}
{-# LANGUAGE OverloadedStrings #-}
{-# LANGUAGE TemplateHaskell #-}
------------------------------------------------------------------------
module
Gargantext.Database.Queries.Join
where
------------------------------------------------------------------------
import
Control.Applicative
((
<*>
))
import
Control.Arrow
((
>>>
))
import
Data.Profunctor.Product.Default
import
Gargantext.Database.Schema.Ngrams
import
Gargantext.Database.Schema.Node
import
Gargantext.Database.Schema.NodeNode
import
Gargantext.Prelude
import
Opaleye
import
Opaleye.Internal.Join
(
NullMaker
(
..
))
import
qualified
Opaleye.Internal.Unpackspec
()
--leftJoin3 :: Query columnsL1 -> Query columnsR -> Query columnsL
-- -> ((columnsL1, columnsR) -> Column PGBool)
-- -> ((columnsL, (columnsL1, nullableColumnsR1)) -> Column PGBool)
-- -> Query (columnsL, nullableColumnsR)
--leftJoin3 q1 q2 q3 cond12 cond23 = leftJoin q3 (leftJoin q1 q2 cond12) cond23
join3
::
Query
columnsA
->
Query
columnsB
->
Query
columnsC
->
((
columnsA
,
columnsB
,
columnsC
)
->
Column
PGBool
)
->
Query
(
columnsA
,
columnsB
,
columnsC
)
join3
q1
q2
q3
cond
=
((,,)
<$>
q1
<*>
q2
<*>
q3
)
>>>
keepWhen
cond
------------------------------------------------------------------------
leftJoin3'
::
Query
(
NodeRead
,
(
NodeNodeReadNull
,
NodeReadNull
))
leftJoin3'
=
leftJoin3
queryNodeNodeTable
queryNodeTable
queryNodeTable
cond12
cond23
where
cond12
=
undefined
cond23
::
(
NodeRead
,
(
NodeNodeRead
,
NodeReadNull
))
->
Column
PGBool
cond23
=
undefined
leftJoin3
::
(
Default
Unpackspec
columnsL1
columnsL1
,
Default
Unpackspec
columnsL2
columnsL2
,
Default
Unpackspec
columnsL3
columnsL3
,
Default
Unpackspec
nullableColumnsL2
nullableColumnsL2
,
Default
NullMaker
columnsL2
nullableColumnsL2
,
Default
NullMaker
(
columnsL1
,
nullableColumnsL2
)
nullableColumnsL3
)
=>
Query
columnsL1
->
Query
columnsL2
->
Query
columnsL3
->
((
columnsL1
,
columnsL2
)
->
Column
PGBool
)
->
((
columnsL3
,
(
columnsL1
,
nullableColumnsL2
))
->
Column
PGBool
)
->
Query
(
columnsL3
,
nullableColumnsL3
)
leftJoin3
q1
q2
q3
cond12
cond23
=
leftJoin
q3
(
leftJoin
q1
q2
cond12
)
cond23
--{-
leftJoin4'
::
Query
(
NodeRead
,
(
NodeReadNull
,
(
NgramsReadNull
,
NodeReadNull
)))
leftJoin4'
=
leftJoin4
queryNgramsTable
queryNodeTable
queryNodeTable
queryNodeTable
cond12
cond23
cond34
where
cond12
::
(
NgramsRead
,
NodeRead
)
->
Column
PGBool
cond12
=
undefined
cond23
::
(
NodeRead
,
(
NgramsRead
,
NodeReadNull
))
->
Column
PGBool
cond23
=
undefined
cond34
::
(
NodeRead
,
(
NodeRead
,
(
NgramsReadNull
,
NodeReadNull
)))
->
Column
PGBool
cond34
=
undefined
{-
rightJoin4' :: Query (((NodeReadNull, NodeReadNull), NodeReadNull), NodeRead)
rightJoin4' = rightJoin4 queryNodeTable queryNodeTable queryNodeTable queryNodeTable cond12 cond23 cond34
where
cond12 :: (NodeRead, NodeRead) -> Column PGBool
cond12 = undefined
cond23 :: ((NodeReadNull, NodeRead), NodeRead) -> Column PGBool
cond23 = undefined
cond34 :: (((NodeReadNull, NodeReadNull), NodeRead), NodeRead) -> Column PGBool
cond34 = undefined
--}
leftJoin4
::
(
Default
Unpackspec
fieldsL1
fieldsL1
,
Default
Unpackspec
fieldsL2
fieldsL2
,
Default
Unpackspec
nullableFieldsR1
nullableFieldsR1
,
Default
Unpackspec
fieldsL3
fieldsL3
,
Default
Unpackspec
nullableFieldsR2
nullableFieldsR2
,
Default
Unpackspec
fieldsR
fieldsR
,
Default
NullMaker
fieldsR
nullableFieldsR2
,
Default
NullMaker
(
fieldsL2
,
nullableFieldsR1
)
nullableFieldsR3
,
Default
NullMaker
(
fieldsL3
,
nullableFieldsR2
)
nullableFieldsR1
)
=>
Opaleye
.
Select
fieldsL3
->
Opaleye
.
Select
fieldsR
->
Opaleye
.
Select
fieldsL2
->
Opaleye
.
Select
fieldsL1
->
((
fieldsL3
,
fieldsR
)
->
Column
PGBool
)
->
((
fieldsL2
,
(
fieldsL3
,
nullableFieldsR2
))
->
Column
PGBool
)
->
((
fieldsL1
,
(
fieldsL2
,
nullableFieldsR1
))
->
Column
PGBool
)
->
Opaleye
.
Select
(
fieldsL1
,
nullableFieldsR3
)
leftJoin4
q1
q2
q3
q4
cond12
cond23
cond34
=
leftJoin
q4
(
leftJoin
q3
(
leftJoin
q1
q2
cond12
)
cond23
)
cond34
-- rightJoin4 q1 q2 q3 q4 cond12 cond23 cond34 = rightJoin q4 (rightJoin q3 (rightJoin q1 q2 cond12) cond23) cond34
leftJoin5'
::
Query
(
NodeRead
,
(
NodeReadNull
,
(
NodeReadNull
,
(
NodeReadNull
,
NodeReadNull
))))
leftJoin5'
=
leftJoin5
queryNodeTable
queryNodeTable
queryNodeTable
queryNodeTable
queryNodeTable
cond12
cond23
cond34
cond45
where
cond12
::
(
NodeRead
,
NodeRead
)
->
Column
PGBool
cond12
=
undefined
cond23
::
(
NodeRead
,
(
NodeRead
,
NodeReadNull
))
->
Column
PGBool
cond23
=
undefined
cond34
::
(
NodeRead
,
(
NodeRead
,
(
NodeReadNull
,
NodeReadNull
)))
->
Column
PGBool
cond34
=
undefined
cond45
::
(
NodeRead
,
(
NodeRead
,
(
NodeReadNull
,
(
NodeReadNull
,
NodeReadNull
))))
->
Column
PGBool
cond45
=
undefined
leftJoin5
::
(
Default
Unpackspec
fieldsL1
fieldsL1
,
Default
Unpackspec
fieldsL2
fieldsL2
,
Default
Unpackspec
nullableFieldsR1
nullableFieldsR1
,
Default
Unpackspec
fieldsL3
fieldsL3
,
Default
Unpackspec
nullableFieldsR2
nullableFieldsR2
,
Default
Unpackspec
fieldsL4
fieldsL4
,
Default
Unpackspec
nullableFieldsR3
nullableFieldsR3
,
Default
Unpackspec
fieldsR
fieldsR
,
Default
NullMaker
fieldsR
nullableFieldsR3
,
Default
NullMaker
(
fieldsL2
,
nullableFieldsR1
)
nullableFieldsR4
,
Default
NullMaker
(
fieldsL3
,
nullableFieldsR2
)
nullableFieldsR1
,
Default
NullMaker
(
fieldsL4
,
nullableFieldsR3
)
nullableFieldsR2
)
=>
Query
fieldsR
->
Query
fieldsL4
->
Query
fieldsL3
->
Query
fieldsL2
->
Query
fieldsL1
->
((
fieldsL4
,
fieldsR
)
->
Column
PGBool
)
->
((
fieldsL3
,
(
fieldsL4
,
nullableFieldsR3
))
->
Column
PGBool
)
->
((
fieldsL2
,
(
fieldsL3
,
nullableFieldsR2
))
->
Column
PGBool
)
->
((
fieldsL1
,
(
fieldsL2
,
nullableFieldsR1
))
->
Column
PGBool
)
->
Query
(
fieldsL1
,
nullableFieldsR4
)
leftJoin5
q1
q2
q3
q4
q5
cond12
cond23
cond34
cond45
=
leftJoin
q5
(
leftJoin
q4
(
leftJoin
q3
(
leftJoin
q2
q1
cond12
)
cond23
)
cond34
)
cond45
leftJoin6
::
(
Default
Unpackspec
fieldsL1
fieldsL1
,
Default
Unpackspec
fieldsL2
fieldsL2
,
Default
Unpackspec
nullableFieldsR1
nullableFieldsR1
,
Default
Unpackspec
fieldsL3
fieldsL3
,
Default
Unpackspec
nullableFieldsR2
nullableFieldsR2
,
Default
Unpackspec
fieldsL4
fieldsL4
,
Default
Unpackspec
nullableFieldsR3
nullableFieldsR3
,
Default
Unpackspec
fieldsL5
fieldsL5
,
Default
Unpackspec
nullableFieldsR4
nullableFieldsR4
,
Default
Unpackspec
fieldsR
fieldsR
,
Default
NullMaker
fieldsR
nullableFieldsR4
,
Default
NullMaker
(
fieldsL2
,
nullableFieldsR1
)
nullableFieldsR5
,
Default
NullMaker
(
fieldsL3
,
nullableFieldsR2
)
nullableFieldsR1
,
Default
NullMaker
(
fieldsL4
,
nullableFieldsR3
)
nullableFieldsR2
,
Default
NullMaker
(
fieldsL5
,
nullableFieldsR4
)
nullableFieldsR3
)
=>
Query
fieldsR
->
Query
fieldsL5
->
Query
fieldsL4
->
Query
fieldsL3
->
Query
fieldsL2
->
Query
fieldsL1
->
((
fieldsL5
,
fieldsR
)
->
Column
PGBool
)
->
((
fieldsL4
,
(
fieldsL5
,
nullableFieldsR4
))
->
Column
PGBool
)
->
((
fieldsL3
,
(
fieldsL4
,
nullableFieldsR3
))
->
Column
PGBool
)
->
((
fieldsL2
,
(
fieldsL3
,
nullableFieldsR2
))
->
Column
PGBool
)
->
((
fieldsL1
,
(
fieldsL2
,
nullableFieldsR1
))
->
Column
PGBool
)
->
Query
(
fieldsL1
,
nullableFieldsR5
)
leftJoin6
q1
q2
q3
q4
q5
q6
cond12
cond23
cond34
cond45
cond56
=
leftJoin
q6
(
leftJoin
q5
(
leftJoin
q4
(
leftJoin
q3
(
leftJoin
q2
q1
cond12
)
cond23
)
cond34
)
cond45
)
cond56
src/Gargantext/Database/Root.hs
View file @
cadd8650
...
...
@@ -31,12 +31,12 @@ import Opaleye.PGTypes (pgStrictText, pgInt4)
import
Control.Arrow
(
returnA
)
import
Gargantext.Prelude
import
Gargantext.Database.Types.Node
(
Node
,
NodePoly
(
..
),
NodeType
(
NodeUser
),
HyperdataUser
)
import
Gargantext.Database.
Queries
(
NodeRead
)
import
Gargantext.Database.Node
(
queryNodeTable
)
import
Gargantext.Database.User
(
queryUserTable
,
UserPoly
(
..
))
import
Gargantext.Database.
Schema.Node
(
NodeRead
)
import
Gargantext.Database.
Schema.
Node
(
queryNodeTable
)
import
Gargantext.Database.
Schema.
User
(
queryUserTable
,
UserPoly
(
..
))
import
Gargantext.Database.Config
(
nodeTypeId
)
import
Gargantext.Core.Types.Individu
(
Username
)
import
Gargantext.Database.
Node
(
Cmd
(
..
),
mkCmd
)
import
Gargantext.Database.
Utils
(
Cmd
(
..
),
mkCmd
)
getRootCmd
::
Username
->
Cmd
[
Node
HyperdataUser
]
getRootCmd
u
=
mkCmd
$
\
c
->
getRoot
u
c
...
...
src/Gargantext/Database/Ngrams.hs
→
src/Gargantext/Database/
Schema/
Ngrams.hs
View file @
cadd8650
{-|
Module : Gargantext.Database.Ngrams
Module : Gargantext.Database.
Schema.
Ngrams
Description : Ngram connection to the Database
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
...
...
@@ -21,17 +21,16 @@ Ngrams connection to the Database.
{-# LANGUAGE QuasiQuotes #-}
{-# LANGUAGE TemplateHaskell #-}
module
Gargantext.Database.Ngrams
where
module
Gargantext.Database.
Schema.
Ngrams
where
import
Database.PostgreSQL.Simple
as
DPS
(
Connection
)
import
Data.Profunctor.Product.TH
(
makeAdaptorAndInstance
)
import
Opaleye
import
Control.Lens
(
makeLenses
,
view
)
import
Data.ByteString.Internal
(
ByteString
)
import
Data.Map
(
Map
,
fromList
,
lookup
,
fromListWith
)
import
Data.Profunctor.Product.TH
(
makeAdaptorAndInstance
)
import
Data.Set
(
Set
)
import
Data.Text
(
Text
,
splitOn
)
import
Database.PostgreSQL.Simple
as
DPS
(
Connection
)
import
Database.PostgreSQL.Simple.FromRow
(
fromRow
,
field
)
import
Database.PostgreSQL.Simple.SqlQQ
(
sql
)
import
Database.PostgreSQL.Simple.ToField
(
toField
)
...
...
@@ -39,13 +38,15 @@ import Database.PostgreSQL.Simple.ToRow (toRow)
import
Database.PostgreSQL.Simple.Types
(
Values
(
..
),
QualifiedIdentifier
(
..
))
import
Debug.Trace
(
trace
)
import
GHC.Generics
(
Generic
)
import
Gargantext.Core.Types
(
CorpusId
)
import
Gargantext.Core.Types
-- (fromListTypeId, ListType, NodePoly(Node))
import
Gargantext.Database.Config
(
nodeTypeId
,
userMaster
)
import
Gargantext.Database.Node
(
mkCmd
,
Cmd
(
..
),
getListsWithParentId
,
getCorporaWithParentId
)
import
Gargantext.Database.Root
(
getRoot
)
import
Gargantext.Core.Types
(
CorpusId
)
import
Gargantext.Database.Types.Node
(
NodeType
)
import
Gargantext.Database.Schema.Node
(
getListsWithParentId
,
getCorporaWithParentId
)
import
Gargantext.Database.Utils
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Prelude
import
Opaleye
import
Prelude
(
Enum
,
Bounded
,
minBound
,
maxBound
)
import
qualified
Data.Set
as
DS
import
qualified
Database.PostgreSQL.Simple
as
DPS
...
...
src/Gargantext/Database/Node.hs
→
src/Gargantext/Database/
Schema/
Node.hs
View file @
cadd8650
This diff is collapsed.
Click to expand it.
src/Gargantext/Database/NodeNgram.hs
→
src/Gargantext/Database/
Schema/
NodeNgram.hs
View file @
cadd8650
{-|
Module : Gargantext.Database.NodeNgrams
Module : Gargantext.Database.
Schema.
NodeNgrams
Description : NodeNgram for Ngram indexation or Lists
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
...
...
@@ -27,7 +27,7 @@ if Node is a List then it is listing (either Stop, Candidate or Map)
-- TODO NodeNgrams
module
Gargantext.Database.NodeNgram
where
module
Gargantext.Database.
Schema.
NodeNgram
where
import
Data.Text
(
Text
)
import
Control.Lens.TH
(
makeLensesWith
,
abbreviatedFields
)
...
...
@@ -35,7 +35,7 @@ import Data.Profunctor.Product.TH (makeAdaptorAndInstance)
import
Database.PostgreSQL.Simple.Types
(
Values
(
..
),
QualifiedIdentifier
(
..
))
import
Database.PostgreSQL.Simple.SqlQQ
(
sql
)
import
Gargantext.Core.Types.Main
(
ListId
,
ListTypeId
)
import
Gargantext.Database.
Node
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Database.
Utils
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Prelude
import
Opaleye
import
qualified
Database.PostgreSQL.Simple
as
PGS
(
Connection
,
query
,
Only
(
..
))
...
...
src/Gargantext/Database/NodeNgramsNgrams.hs
→
src/Gargantext/Database/
Schema/
NodeNgramsNgrams.hs
View file @
cadd8650
{-|
Module : Gargantext.Database.NodeNgramsNgrams
Module : Gargantext.Database.
Schema.
NodeNgramsNgrams
Description :
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
...
...
@@ -28,7 +28,7 @@ Next Step benchmark:
{-# LANGUAGE TemplateHaskell #-}
{-# OPTIONS_GHC -fno-warn-orphans #-}
module
Gargantext.Database.NodeNgramsNgrams
module
Gargantext.Database.
Schema.
NodeNgramsNgrams
where
import
Control.Lens.TH
(
makeLensesWith
,
abbreviatedFields
)
...
...
@@ -37,7 +37,7 @@ import Data.Maybe (Maybe)
import
Data.Profunctor.Product.TH
(
makeAdaptorAndInstance
)
import
Database.PostgreSQL.Simple.SqlQQ
(
sql
)
import
Database.PostgreSQL.Simple.Types
(
Values
(
..
),
QualifiedIdentifier
(
..
))
import
Gargantext.Database.
Node
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Database.
Utils
(
mkCmd
,
Cmd
(
..
))
import
Gargantext.Prelude
import
Opaleye
import
qualified
Database.PostgreSQL.Simple
as
DPS
...
...
src/Gargantext/Database/NodeNode.hs
→
src/Gargantext/Database/
Schema/
NodeNode.hs
View file @
cadd8650
{-|
Module : Gargantext.Database.NodeNode
Module : Gargantext.Database.
Schema.
NodeNode
Description :
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
...
...
@@ -22,7 +22,7 @@ commentary with @some markup@.
{-# LANGUAGE OverloadedStrings #-}
{-# LANGUAGE TemplateHaskell #-}
module
Gargantext.Database.NodeNode
where
module
Gargantext.Database.
Schema.
NodeNode
where
import
qualified
Database.PostgreSQL.Simple
as
PGS
(
Connection
,
Query
,
query
,
Only
(
..
))
import
Database.PostgreSQL.Simple.Types
(
Values
(
..
),
QualifiedIdentifier
(
..
))
...
...
@@ -30,7 +30,7 @@ import Database.PostgreSQL.Simple.SqlQQ (sql)
import
Control.Lens.TH
(
makeLensesWith
,
abbreviatedFields
)
import
Data.Maybe
(
Maybe
)
import
Data.Profunctor.Product.TH
(
makeAdaptorAndInstance
)
import
Gargantext.Database.
Node
(
Cmd
(
..
),
mkCmd
)
import
Gargantext.Database.
Utils
import
Gargantext.Core.Types.Main
(
CorpusId
,
DocId
)
import
Gargantext.Prelude
import
Opaleye
...
...
src/Gargantext/Database/NodeNodeNgram.hs
→
src/Gargantext/Database/
Schema/
NodeNodeNgram.hs
View file @
cadd8650
{-|
Module : Gargantext.Database.NodeNodeNgram
Module : Gargantext.Database.
Schema.
NodeNodeNgram
Description : TODO: remove this module and table in database
Copyright : (c) CNRS, 2017-Present
License : AGPL + CECILL v3
...
...
@@ -18,7 +18,7 @@ Portability : POSIX
{-# OPTIONS_GHC -fno-warn-orphans #-}
module
Gargantext.Database.NodeNodeNgram
where
module
Gargantext.Database.
Schema.
NodeNodeNgram
where
import
Prelude
import
Data.Maybe
(
Maybe
)
...
...
src/Gargantext/Database/User.hs
→
src/Gargantext/Database/
Schema/
User.hs
View file @
cadd8650
...
...
@@ -20,7 +20,7 @@ Functions to deal with users, database side.
{-# LANGUAGE Arrows #-}
{-# LANGUAGE NoImplicitPrelude #-}
module
Gargantext.Database.User
where
module
Gargantext.Database.
Schema.
User
where
import
Control.Arrow
(
returnA
)
import
Control.Lens.TH
(
makeLensesWith
,
abbreviatedFields
)
...
...
@@ -31,8 +31,8 @@ import Data.Profunctor.Product.TH (makeAdaptorAndInstance)
import
Data.Text
(
Text
)
import
Data.Time
(
UTCTime
)
import
GHC.Show
(
Show
(
..
))
import
Gargantext.Database.Node
(
Cmd
(
..
),
mkCmd
,
runCmd
)
import
Gargantext.Core.Types.Individu
(
Username
)
import
Gargantext.Database.Utils
import
Gargantext.Prelude
import
Opaleye
...
...
src/Gargantext/Database/TextSearch.hs
View file @
cadd8650
...
...
@@ -6,33 +6,96 @@ License : AGPL + CECILL v3
Maintainer : team@gargantext.org
Stability : experimental
Portability : POSIX
-}
{-# LANGUAGE Arrows #-}
{-# LANGUAGE NoImplicitPrelude #-}
{-# LANGUAGE OverloadedStrings #-}
module
Gargantext.Database.TextSearch
where
import
Data.Aeson
import
Data.List
(
intersperse
)
import
Data.String
(
IsString
(
..
))
import
Data.Text
(
Text
,
words
)
import
Database.PostgreSQL.Simple
import
Data.Text
(
Text
,
words
,
unpack
)
import
Database.PostgreSQL.Simple
-- (Query, Connection)
import
Database.PostgreSQL.Simple.ToField
import
Gargantext.Database.Config
(
nodeTypeId
)
import
Gargantext.Database.Types.Node
(
NodeType
(
..
))
import
Gargantext.Prelude
import
Gargantext.Database.Schema.Node
import
Gargantext.Database.Schema.NodeNode
import
Gargantext.Core.Types
import
Control.Arrow
(
returnA
)
import
qualified
Opaleye
as
O
hiding
(
Order
)
import
Opaleye
hiding
(
Query
,
Order
)
newtype
TSQuery
=
UnsafeTSQuery
[
Text
]
globalTextSearch
::
Connection
->
ParentId
->
Text
->
IO
[(
NodeId
,
HyperdataDocument
)]
globalTextSearch
c
p
t
=
runQuery
c
(
globalTextSearchQuery
p
t
)
-- | Global search query where ParentId is Master Node Corpus Id
globalTextSearchQuery
::
ParentId
->
Text
->
O
.
Query
(
Column
PGInt4
,
Column
PGJsonb
)
globalTextSearchQuery
_
q
=
proc
()
->
do
row
<-
queryNodeSearchTable
-<
()
restrict
-<
(
_ns_search
row
)
@@
(
pgTSQuery
(
unpack
q
))
restrict
-<
(
_ns_typename
row
)
.==
(
pgInt4
$
nodeTypeId
NodeDocument
)
returnA
-<
(
_ns_id
row
,
_ns_hyperdata
row
)
------------------------------------------------------------------------
{-
graphCorpusAuthorQuery :: O.Query (NodeRead, (NodeNgramRead, (NgramsReadNull, NodeNgramReadNull)))
graphCorpusAuthorQuery = leftJoin4 queryNgramsTable queryNodeNgramTable queryNodeNgramTable queryNodeTable cond12 cond23 cond34
where
--cond12 :: (NgramsRead, NodeNgramRead) -> Column PGBool
cond12 = undefined
cond23 :: (NodeNgramRead, (NodeNgramRead, NodeNgramReadNull)) -> Column PGBool
cond23 = undefined
cond34 :: (NodeRead, (NodeNgramRead, (NodeReadNull, NodeNgramReadNull))) -> Column PGBool
cond34 = undefined
--}
--runGraphCorpusDocSearch :: Connection -> CorpusId -> Text -> IO [(Column PGInt4, Column PGJsonb)]
--runGraphCorpusDocSearch c cId t = runQuery c $ graphCorpusDocSearch cId t
-- | todo add limit and offset and order
graphCorpusDocSearch
::
CorpusId
->
Text
->
O
.
Query
(
Column
PGInt4
,
Column
PGJsonb
)
graphCorpusDocSearch
cId
t
=
proc
()
->
do
(
n
,
nn
)
<-
graphCorpusDocSearchQuery
-<
()
restrict
-<
(
_ns_search
n
)
@@
(
pgTSQuery
(
unpack
t
))
restrict
-<
(
nodeNode_node1_id
nn
)
.==
(
toNullable
$
pgInt4
cId
)
restrict
-<
(
_ns_typename
n
)
.==
(
pgInt4
$
nodeTypeId
NodeDocument
)
returnA
-<
(
_ns_id
n
,
_ns_hyperdata
n
)
graphCorpusDocSearchQuery
::
O
.
Query
(
NodeSearchRead
,
NodeNodeReadNull
)
graphCorpusDocSearchQuery
=
leftJoin
queryNodeSearchTable
queryNodeNodeTable
cond
where
cond
::
(
NodeSearchRead
,
NodeNodeRead
)
->
Column
PGBool
cond
(
n
,
nn
)
=
nodeNode_node1_id
nn
.==
_ns_id
n
-- | TODO [""] -> panic "error"
toTSQuery
::
[
Text
]
->
TSQuery
toTSQuery
txt
=
UnsafeTSQuery
txt
instance
IsString
TSQuery
where
fromString
=
UnsafeTSQuery
.
words
.
cs
...
...
@@ -48,9 +111,6 @@ instance ToField TSQuery
]
)
xs
type
ParentId
=
Int
type
Limit
=
Int
type
Offset
=
Int
data
Order
=
Asc
|
Desc
instance
ToField
Order
...
...
src/Gargantext/Database/Types/Node.hs
View file @
cadd8650
...
...
@@ -63,8 +63,6 @@ type UTCTime' = UTCTime
instance
Arbitrary
UTCTime'
where
arbitrary
=
elements
$
timesAfter
100
D
(
jour
2000
01
01
)
------------------------------------------------------------------------
data
Status
=
Status
{
status_failed
::
Int
,
status_succeeded
::
Int
...
...
@@ -324,18 +322,15 @@ instance Hyperdata HyperdataNotebook
-- | NodePoly indicates that Node has a Polymorphism Type
type
Node
json
=
NodePoly
NodeId
NodeTypeId
NodeUserId
(
Maybe
NodeParentId
)
NodeName
UTCTime
json
-- NodeVector
type
Node
json
=
NodePoly
NodeId
NodeTypeId
NodeUserId
(
Maybe
NodeParentId
)
NodeName
UTCTime
json
-- type Node json = NodePoly NodeId NodeTypeId UserId ParentId NodeName UTCTime json
type
NodeTypeId
=
Int
type
NodeParentId
=
Int
type
NodeUserId
=
Int
type
NodeName
=
Text
--type NodeVector = Vector
--type NodeUser = Node HyperdataUser
type
TSVector
=
Text
type
NodeAny
=
Node
HyperdataAny
-- | Then a Node can be either a Folder or a Corpus or a Document
type
NodeUser
=
Node
HyperdataUser
...
...
@@ -347,6 +342,9 @@ type NodeDocument = Node HyperdataDocument
type
NodeAnnuaire
=
Node
HyperdataAnnuaire
-- | Any others nodes
type
NodeAny
=
Node
HyperdataAny
---- | Then a Node can be either a Graph or a Phylo or a Notebook
type
NodeList
=
Node
HyperdataList
type
NodeGraph
=
Node
HyperdataGraph
...
...
@@ -379,23 +377,67 @@ instance ToParamSchema NodeType
instance
ToSchema
NodeType
------------------------------------------------------------------------
data
NodePoly
id
typename
userId
parentId
name
date
hyperdata
=
Node
{
_node_id
::
id
,
_node_typename
::
typename
,
_node_userId
::
userId
-- , nodeUniqId :: hashId
,
_node_parentId
::
parentId
,
_node_name
::
name
,
_node_date
::
date
,
_node_hyperdata
::
hyperdata
}
deriving
(
Show
,
Generic
)
data
NodePoly
id
typename
userId
parentId
name
date
hyperdata
=
Node
{
_node_id
::
id
,
_node_typename
::
typename
,
_node_userId
::
userId
,
_node_parentId
::
parentId
,
_node_name
::
name
,
_node_date
::
date
,
_node_hyperdata
::
hyperdata
}
deriving
(
Show
,
Generic
)
$
(
deriveJSON
(
unPrefix
"_node_"
)
''
N
odePoly
)
$
(
makeLenses
''
N
odePoly
)
instance
Arbitrary
hyperdata
=>
Arbitrary
(
NodePoly
NodeId
NodeTypeId
(
Maybe
NodeUserId
)
NodeParentId
NodeName
UTCTime
hyperdata
)
where
arbitrary
=
Node
1
1
(
Just
1
)
1
"name"
(
jour
2018
01
01
)
<$>
arbitrary
instance
Arbitrary
hyperdata
=>
Arbitrary
(
NodePoly
NodeId
NodeTypeId
NodeUserId
(
Maybe
NodeParentId
)
NodeName
UTCTime
hyperdata
)
where
arbitrary
=
Node
1
1
1
(
Just
1
)
"name"
(
jour
2018
01
01
)
<$>
arbitrary
data
NodePolySearch
id
typename
userId
parentId
name
date
hyperdata
search
=
NodeSearch
{
_ns_id
::
id
,
_ns_typename
::
typename
,
_ns_userId
::
userId
-- , nodeUniqId :: hashId
,
_ns_parentId
::
parentId
,
_ns_name
::
name
,
_ns_date
::
date
,
_ns_hyperdata
::
hyperdata
,
_ns_search
::
search
}
deriving
(
Show
,
Generic
)
$
(
deriveJSON
(
unPrefix
"_ns_"
)
''
N
odePolySearch
)
$
(
makeLenses
''
N
odePolySearch
)
type
NodeSearch
json
=
NodePolySearch
NodeId
NodeTypeId
NodeUserId
(
Maybe
NodeParentId
)
NodeName
UTCTime
json
(
Maybe
TSVector
)
------------------------------------------------------------------------
instance
(
Arbitrary
hyperdata
,
Arbitrary
nodeId
,
Arbitrary
nodeTypeId
,
Arbitrary
nodeUserId
,
Arbitrary
nodeParentId
)
=>
Arbitrary
(
NodePoly
nodeId
nodeTypeId
nodeUserId
nodeParentId
NodeName
UTCTime
hyperdata
)
where
--arbitrary = Node 1 1 (Just 1) 1 "name" (jour 2018 01 01) (arbitrary) (Just "")
arbitrary
=
Node
<$>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
instance
(
Arbitrary
hyperdata
,
Arbitrary
nodeId
,
Arbitrary
nodeTypeId
,
Arbitrary
nodeUserId
,
Arbitrary
nodeParentId
)
=>
Arbitrary
(
NodePolySearch
nodeId
nodeTypeId
nodeUserId
nodeParentId
NodeName
UTCTime
hyperdata
(
Maybe
TSVector
))
where
--arbitrary = Node 1 1 (Just 1) 1 "name" (jour 2018 01 01) (arbitrary) (Just "")
arbitrary
=
NodeSearch
<$>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
<*>
arbitrary
------------------------------------------------------------------------
hyperdataDocument
::
HyperdataDocument
...
...
@@ -449,6 +491,20 @@ instance ToSchema hyperdata =>
)
instance
ToSchema
hyperdata
=>
ToSchema
(
NodePolySearch
NodeId
NodeTypeId
(
Maybe
NodeUserId
)
NodeParentId
NodeName
UTCTime
hyperdata
(
Maybe
TSVector
)
)
instance
ToSchema
hyperdata
=>
ToSchema
(
NodePolySearch
NodeId
NodeTypeId
NodeUserId
(
Maybe
NodeParentId
)
NodeName
UTCTime
hyperdata
(
Maybe
TSVector
)
)
instance
ToSchema
Status
...
...
src/Gargantext/Database/Utils.hs
View file @
cadd8650
...
...
@@ -14,37 +14,54 @@ commentary with @some markup@.
{-# LANGUAGE FlexibleContexts #-}
{-# LANGUAGE NoImplicitPrelude #-}
{-# LANGUAGE OverloadedStrings #-}
{-# LANGUAGE GeneralizedNewtypeDeriving #-}
module
Gargantext.Database.Utils
where
import
qualified
Database.PostgreSQL.Simple
as
PGS
import
Control.Applicative
(
Applicative
)
import
Control.Monad.Reader
import
Data.Aeson
(
Result
(
Error
,
Success
),
fromJSON
,
FromJSON
)
import
Data.Typeable
(
Typeable
)
import
Data.Monoid
((
<>
))
import
Data.Either.Extra
(
Either
(
Left
,
Right
))
import
Database.PostgreSQL.Simple.Internal
(
Field
)
import
qualified
Data.ByteString
as
DB
import
Database.PostgreSQL.Simple.FromField
(
Conversion
,
ResultError
(
ConversionFailed
)
,
fromField
,
returnError
)
import
Data.Ini
(
readIniFile
,
lookupValue
)
import
Data.Maybe
(
maybe
)
import
Data.Monoid
((
<>
))
import
Data.Profunctor.Product.Default
(
Default
)
import
Data.Text
(
unpack
,
pack
)
import
Data.Typeable
(
Typeable
)
import
Data.Word
(
Word16
)
import
Database.PostgreSQL.Simple
(
Connection
,
connect
)
import
Database.PostgreSQL.Simple.FromField
(
Conversion
,
ResultError
(
ConversionFailed
),
fromField
,
returnError
)
import
Database.PostgreSQL.Simple.Internal
(
Field
)
import
Gargantext.Prelude
import
Opaleye
(
Query
,
Unpackspec
,
showSqlForPostgres
)
import
System.IO
(
FilePath
)
import
Text.Read
(
read
)
import
qualified
Data.ByteString
as
DB
import
qualified
Database.PostgreSQL.Simple
as
PGS
-- Utilities
import
Opaleye
(
Query
,
Unpackspec
,
showSqlForPostgres
)
import
Data.Profunctor.Product.Default
(
Default
)
import
Data.Maybe
(
maybe
)
-- TODO add a reader Monad here
-- read this in the init file
------------------------------------------------------------------------
{- | Reader Monad reinvented here:
newtype Cmd a = Cmd { unCmd :: Connection -> IO a }
instance Monad Cmd where
return a = Cmd $ \_ -> return a
m >>= f = Cmd $ \c -> do
a <- unCmd m c
unCmd (f a) c
-}
newtype
Cmd
a
=
Cmd
(
ReaderT
Connection
IO
a
)
deriving
(
Functor
,
Applicative
,
Monad
,
MonadReader
Connection
,
MonadIO
)
runCmd
::
Connection
->
Cmd
a
->
IO
a
runCmd
c
(
Cmd
f
)
=
runReaderT
f
c
mkCmd
::
(
Connection
->
IO
a
)
->
Cmd
a
mkCmd
=
Cmd
.
ReaderT
------------------------------------------------------------------------
databaseParameters
::
FilePath
->
IO
PGS
.
ConnectInfo
databaseParameters
fp
=
do
...
...
@@ -80,4 +97,4 @@ fromField' field mb = do
Error
_err
->
returnError
ConversionFailed
field
"cannot parse hyperdata"
-- | Opaleye leftJoin* functions
-- TODO add here from Node.hs
src/Gargantext/Text/Flow.hs
View file @
cadd8650
...
...
@@ -29,7 +29,7 @@ import qualified Data.Map.Strict as M
----------------------------------------------
import
Gargantext.Database
(
Connection
)
import
Gargantext.Database.Node
import
Gargantext.Database.
Schema.
Node
import
Gargantext.Database.Types.Node
import
Gargantext.Core
(
Lang
)
...
...
src/Gargantext/Viz/Phylo.hs
View file @
cadd8650
...
...
@@ -33,7 +33,7 @@ import Data.Maybe (Maybe)
import
Data.Text
(
Text
)
import
Data.Time.Clock.POSIX
(
POSIXTime
)
import
GHC.Generics
(
Generic
)
import
Gargantext.Database.Ngrams
(
NgramsId
)
import
Gargantext.Database.
Schema.
Ngrams
(
NgramsId
)
import
Gargantext.Core.Utils.Prefix
(
unPrefix
)
import
Gargantext.Prelude
...
...
stack.yaml
View file @
cadd8650
...
...
@@ -7,6 +7,7 @@ packages:
-
'
deps/clustering-louvain'
-
'
deps/patches-map'
-
'
deps/patches-class'
-
'
deps/haskell-opaleye'
allow-newer
:
true
extra-deps
:
...
...
@@ -17,7 +18,7 @@ extra-deps:
-
git
:
https://github.com/delanoe/servant-static-th.git
commit
:
ba5347e7d8a13ce5275af8470c15b2305fbb23af
-
accelerate-1.2.0.0
-
opaleye-0.6.7002.0
#
- opaleye-0.6.7002.0
-
aeson-lens-0.5.0.0
-
duckling-0.1.3.0
-
full-text-search-0.2.1.4
...
...
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