[license] fix licensing for the project

crawlerPubMed.cabal

-cabal-version: 1.12
+cabal-version: 2.2
 
 -- This file has been generated from package.yaml by hpack version 0.35.2.
 --
@@ -12,7 +12,7 @@ bug-reports:    https://github.com/gitlab/crawlerPubMed/issues
 author:         CNRS Gargantext
 maintainer:     contact@gargantext.org
 copyright:      2019 CNRS/IMT
-license:        BSD3
+license:        AGPL-3.0-or-later
 license-file:   LICENSE
 build-type:     Simple
 extra-source-files:
@@ -32,6 +32,8 @@ library
       PUBMED.Types
   other-modules:
       Paths_crawlerPubMed
+  autogen-modules:
+      Paths_crawlerPubMed
   hs-source-dirs:
       src
   default-extensions:
@@ -108,6 +110,8 @@ test-suite crawlerPubMed-test
   main-is: Spec.hs
   other-modules:
       Paths_crawlerPubMed
+  autogen-modules:
+      Paths_crawlerPubMed
   hs-source-dirs:
       test
   default-extensions:

package.yaml

 name:                crawlerPubMed
 version:             0.1.0.0
 github:              "gitlab/crawlerPubMed"
-license:             BSD3
+license:             AGPL-3.0-or-later
 author:              "CNRS Gargantext"
 maintainer:          "contact@gargantext.org"
 copyright:           "2019 CNRS/IMT"

src/PUBMED.hs

+{-|
+Module      : PUBMED
+Description : PubMed API integration
+Copyright   : (c) CNRS, 2019
+License     : AGPL + CECILL v3
+Maintainer  : team@gargantext.org
+Stability   : experimental
+Portability : POSIX
+-}
+
+
 module PUBMED where
 
 import Conduit
@@ -71,10 +82,10 @@ getMetadataWithC = do
 getPage :: Offset
         -> Env [PubMed]
 getPage pageNum = do
-  (Config { perPage = mPerPage, query }) <- ask
+  (Config { apiKey, perPage = mPerPage, query }) <- ask
   let perPage = fromMaybe defaultPerPage mPerPage
   let offset = fromIntegral $ pageNum * perPage
-  liftIO $ print $ "[getPage] getting page " <> show pageNum <> ", offset: " <> show offset <> ", perPage: " <> show perPage <> ", query: " <> T.unpack query
+  liftIO $ print $ "[getPage] getting page " <> show pageNum <> ", offset: " <> show offset <> ", perPage: " <> show perPage <> ", query: " <> T.unpack query <> ", apiKey: " <> show apiKey
   eDocs <- runSimpleFindPubmedAbstractRequest (Just offset)
   case eDocs of
     Left err -> panic $ "[getPage] error: " <> show err

src/PUBMED/Client.hs

+{-|
+Module      : PUBMED.Client
+Description : PubMed API integration
+Copyright   : (c) CNRS, 20198
+License     : AGPL + CECILL v3
+Maintainer  : team@gargantext.org
+Stability   : experimental
+Portability : POSIX
+-}
+
+
 module PUBMED.Client where
 
 import Data.ByteString.Lazy (ByteString)

src/PUBMED/Parser.hs

 {-# LANGUAGE LambdaCase #-}
 
+{-|
+Module      : PUBMED.Parser
+Description : PubMed API integration
+Copyright   : (c) CNRS, 20198
+License     : AGPL + CECILL v3
+Maintainer  : team@gargantext.org
+Stability   : experimental
+Portability : POSIX
+-}
+
+
 module PUBMED.Parser where
 
 import Control.Lens ((^?), (^.), (^..), only, to, ix, prism', Prism', Traversal')

src/PUBMED/ServantClientLogging.hs

+{-|
+Module      : PUBMED.ServantClientLogging
+Description : PubMed API integration
+Copyright   : (c) CNRS, 20198
+License     : AGPL + CECILL v3
+Maintainer  : team@gargantext.org
+Stability   : experimental
+Portability : POSIX
+-}
 module PUBMED.ServantClientLogging where
 
 import qualified Data.Binary.Builder as DBB

src/PUBMED/Types.hs

+{-|
+Module      : PUBMED.Types
+Description : PubMed API integration
+Copyright   : (c) CNRS, 20198
+License     : AGPL + CECILL v3
+Maintainer  : team@gargantext.org
+Stability   : experimental
+Portability : POSIX
+-}
+
+
 module PUBMED.Types where
 
 import Control.Monad.Reader (ReaderT)