Squashed commit of the following:
commit 27413399 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 15 16:17:10 2024 +0200 [VERSION] +1 to 0.0.7.3.3 commit f1d6a083 Merge: 0143f243 afdbe31d Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 15 15:45:40 2024 +0200 Merge remote-tracking branch 'origin/improve-onboarding-experience' into dev commit 0143f243 Author: Alfredo Di Napoli <alfredo.dinapoli@gmail.com> Date: Mon Oct 14 13:45:12 2024 +0200 Fix step1c again commit 43901901 Author: Alfredo Di Napoli <alfredo.dinapoli@gmail.com> Date: Mon Oct 14 12:39:43 2024 +0200 Fix bug in GargPorter implementation commit d44831d0 Author: Alfredo Di Napoli <alfredo.dinapoli@gmail.com> Date: Mon Oct 14 10:50:31 2024 +0200 Introduce SpecContext, replicate search issue This commit refactors the test code ever so slightly to add a proper type called `SpecContext` rather than anonymous pairs to carry around the spec context/data. It also replicates the search problem around #415 via a test. commit b4260d9b Author: Alfredo Di Napoli <alfredo.dinapoli@gmail.com> Date: Mon Oct 14 09:11:51 2024 +0200 Add soysauce docs list to test-data commit afdbe31d Author: Grégoire Locqueville <gregoire.locqueville@cnrs.fr> Date: Thu Oct 10 18:51:46 2024 +0200 Improve onboarding experience Edited the README to have a linear path to installation. Also made scripts to run the executables without having to worry whether they are on our path. commit 3030272d Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Thu Oct 10 18:31:19 2024 +0200 [VERSION] +1 to 0.0.7.3.2 commit bd33dd6c Merge: 1d3417d9 592d966c Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Thu Oct 10 18:10:51 2024 +0200 Merge remote-tracking branch 'origin/dev-websockets-node-update' into dev commit 592d966c Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Thu Oct 10 18:06:20 2024 +0200 [notifications] add missing test/Test/Core/Notifications.hs commit 1d3417d9 Merge: 163304df a48fe0c8 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Thu Oct 10 17:54:39 2024 +0200 Merge remote-tracking branch 'origin/dev-websockets-node-update' into dev commit a48fe0c8 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Thu Oct 10 10:01:10 2024 +0200 [ws] rename AsyncUpdates to Notifications This is bit more clear commit cd831db4 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Wed Oct 9 16:00:48 2024 +0200 [tests] first working notification test commit 81af005d Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Wed Oct 9 11:05:11 2024 +0200 Squashed commit of the following: commit 163304df Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 18:39:54 2024 +0200 [FIX] conflict commit 82c68074 Merge: f7b76918 5623161c Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 18:28:55 2024 +0200 Merge remote-tracking branch 'origin/dev-websockets-node-update' into dev commit f7b76918 Merge: fe7a92cc 88655f68 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 18:28:53 2024 +0200 [FIX] conflicts commit fe7a92cc Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 17:19:53 2024 +0200 fix: no longer update graphs and phylos on corpus update commit f775d4a3 Merge: 76b557ea d2f4b89d Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 16:27:53 2024 +0200 Merge remote-tracking branch 'origin/dev-guidelines-update' into dev commit 76b557ea Merge: 2925d008 50c77ea2 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 16:27:27 2024 +0200 Merge remote-tracking branch 'origin/304-dev-pubmed-api-not-in-toml' into dev commit d2f4b89d Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 15:37:54 2024 +0200 DEVELOPER_GUIDELINES: update about git amend This is the result of Autumn workshop 2024 commit 50c77ea2 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 15:15:28 2024 +0200 [notifications] fix for send sendNonblocking threw an error initially. I just do a compromise and timeout the normal send (which blocks infinitely sometimes) commit 025b80b6 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 14:10:56 2024 +0200 [docker] fix network: host, fix caddyfile commit 2925d008 Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 10:34:17 2024 +0200 fix arbitrary instance commit e8fb3db6 Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 10:13:40 2024 +0200 fix: re-add lost instances commit b86d2e61 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 10:09:18 2024 +0200 [toml] remove pubmed api key from config It's set up in user settings instead and has been for a long time. commit c06de5ef Merge: ab710337 a0ec337b Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 09:35:55 2024 +0200 Merge remote-tracking branch 'gitlab/dev' into cm/update-corpus-button commit ab710337 Author: Christian Merten <christian@merten.dev> Date: Fri Apr 26 22:32:33 2024 +0200 feat: update corpus endpoint commit d4a9200e Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Wed Oct 9 11:01:43 2024 +0200 [ws] notification action on node share commit 163304df Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 18:39:54 2024 +0200 [FIX] conflict commit 82c68074 Merge: f7b76918 5623161c Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 18:28:55 2024 +0200 Merge remote-tracking branch 'origin/dev-websockets-node-update' into dev commit f7b76918 Merge: fe7a92cc 88655f68 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 18:28:53 2024 +0200 [FIX] conflicts commit 5623161c Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 18:18:23 2024 +0200 [ws] implement node update (rename, move) with notifications to parents commit 88655f68 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 18:05:25 2024 +0200 Squashed commit of the following: commit f775d4a3 Merge: 76b557ea d2f4b89d Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 16:27:53 2024 +0200 Merge remote-tracking branch 'origin/dev-guidelines-update' into dev commit 76b557ea Merge: 2925d008 50c77ea2 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 16:27:27 2024 +0200 Merge remote-tracking branch 'origin/304-dev-pubmed-api-not-in-toml' into dev commit d2f4b89d Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 15:37:54 2024 +0200 DEVELOPER_GUIDELINES: update about git amend This is the result of Autumn workshop 2024 commit 50c77ea2 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 15:15:28 2024 +0200 [notifications] fix for send sendNonblocking threw an error initially. I just do a compromise and timeout the normal send (which blocks infinitely sometimes) commit 025b80b6 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 14:10:56 2024 +0200 [docker] fix network: host, fix caddyfile commit 2925d008 Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 10:34:17 2024 +0200 fix arbitrary instance commit e8fb3db6 Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 10:13:40 2024 +0200 fix: re-add lost instances commit b86d2e61 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 10:09:18 2024 +0200 [toml] remove pubmed api key from config It's set up in user settings instead and has been for a long time. commit c06de5ef Merge: ab710337 a0ec337b Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 09:35:55 2024 +0200 Merge remote-tracking branch 'gitlab/dev' into cm/update-corpus-button commit ab710337 Author: Christian Merten <christian@merten.dev> Date: Fri Apr 26 22:32:33 2024 +0200 feat: update corpus endpoint commit fe7a92cc Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 17:19:53 2024 +0200 fix: no longer update graphs and phylos on corpus update commit f775d4a3 Merge: 76b557ea d2f4b89d Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 16:27:53 2024 +0200 Merge remote-tracking branch 'origin/dev-guidelines-update' into dev commit 76b557ea Merge: 2925d008 50c77ea2 Author: Alexandre Delanoë <devel+git@delanoe.org> Date: Tue Oct 8 16:27:27 2024 +0200 Merge remote-tracking branch 'origin/304-dev-pubmed-api-not-in-toml' into dev commit d2f4b89d Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 15:37:54 2024 +0200 DEVELOPER_GUIDELINES: update about git amend This is the result of Autumn workshop 2024 commit 50c77ea2 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 15:15:28 2024 +0200 [notifications] fix for send sendNonblocking threw an error initially. I just do a compromise and timeout the normal send (which blocks infinitely sometimes) commit 025b80b6 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 14:10:56 2024 +0200 [docker] fix network: host, fix caddyfile commit ee0db8c1 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 12:39:12 2024 +0200 [nix] add nanomsg to nix pkgs Also, fix ./start to use gargantext-settings.toml commit 2925d008 Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 10:34:17 2024 +0200 fix arbitrary instance commit e8fb3db6 Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 10:13:40 2024 +0200 fix: re-add lost instances commit b86d2e61 Author: Przemysław Kaminski <pk@intrepidus.pl> Date: Tue Oct 8 10:09:18 2024 +0200 [toml] remove pubmed api key from config It's set up in user settings instead and has been for a long time. commit c06de5ef Merge: ab710337 a0ec337b Author: Christian Merten <christian@merten.dev> Date: Tue Oct 8 09:35:55 2024 +0200 Merge remote-tracking branch 'gitlab/dev' into cm/update-corpus-button commit ab710337 Author: Christian Merten <christian@merten.dev> Date: Fri Apr 26 22:32:33 2024 +0200 feat: update corpus endpoint